PDBe 1d7r

X-ray diffraction
2Å resolution

CRYSTAL STRUCTURE OF THE COMPLEX OF 2,2-DIALKYLGLYCINE DECARBOXYLASE WITH 5PA

Released:
Source organism: Burkholderia cepacia

Function and Biology Details

Reaction catalysed:
2,2-dialkylglycine + pyruvate = dialkyl ketone + CO(2) + L-alanine. 
Biochemical function:
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
homo tetramer (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
2,2-dialkylglycine decarboxylase Chain: A
Molecule details ›
Chain: A
Length: 433 amino acids
Theoretical weight: 46.5 KDa
Source organism: Burkholderia cepacia
Expression system: Escherichia coli
UniProt:
  • Canonical: P16932 (Residues: 1-433; Coverage: 100%)
Gene name: dgdA
Sequence domains: Aminotransferase class-III
Structure domains:

Ligands and Environments

3 bound ligands:

No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: MPG/DESY, HAMBURG BEAMLINE BW6
Spacegroup: P6422
Unit cell:
a: 152.65Å b: 152.65Å c: 86.22Å
α: 90° β: 90° γ: 120°
R-values:
R R work R free
0.215 0.215 not available
Expression system: Escherichia coli