Function and Biology

ACTIVATION INTERMEDIATE 2 OF HUMAN GASTRICSIN FROM HUMAN STOMACH

Source organism: Homo sapiens
Biochemical function: aspartic-type endopeptidase activity
Biological process: proteolysis
Cellular component: not assigned

EC 3.4.23.3: Gastricsin

Reaction catalysed:
More restricted specificity than pepsin A, but shows preferential cleavage at Tyr-|- bonds. High activity on hemoglobin.
Alternative Name(s):
  • Parapepsin II
  • Pepsin C
  • Pig parapepsin II

GO terms

Biochemical function:
Biological process:
Cellular component:
  • not assigned

Sequence families

Pfam Protein families (Pfam)
PF07966
Domain description: A1 Propeptide
Occurring in:
  1. Gastricsin
The deposited structure of PDB entry 1avf contains 2 copies of Pfam domain PF07966 (A1 Propeptide) in Gastricsin. Showing 1 copy in chain C [auth Q].

PF00026
Domain description: Eukaryotic aspartyl protease
Occurring in:
  1. Gastricsin
The deposited structure of PDB entry 1avf contains 2 copies of Pfam domain PF00026 (Eukaryotic aspartyl protease) in Gastricsin. Showing 1 copy in chain D [auth J].

InterPro InterPro annotations
IPR001461
Domain description: Aspartic peptidase A1 family
Occurring in:
  1. Gastricsin
IPR021109
Domain description: Aspartic peptidase domain superfamily
Occurring in:
  1. Gastricsin
IPR001969
Domain description: Aspartic peptidase, active site
Occurring in:
  1. Gastricsin
IPR033121
Domain description: Peptidase family A1 domain
Occurring in:
  1. Gastricsin
IPR012848
Domain description: Aspartic peptidase, N-terminal
Occurring in:
  1. Gastricsin

Structure domain

CATH CATH domain
2.40.70.10
Class: Mainly Beta
Architecture: Beta Barrel
Topology: Cathepsin D, subunit A; domain 1
Homology: Acid Proteases
Occurring in:
  1. Gastricsin
The deposited structure of PDB entry 1avf contains 4 copies of CATH domain 2.40.70.10 (Cathepsin D, subunit A; domain 1) in Gastricsin. Showing 2 copies in chain D [auth J].
SCOP SCOP annotation
50646
Class: All beta proteins
Fold: Acid proteases
Superfamily: Acid proteases
Occurring in:
  1. Gastricsin
  2. Gastricsin
The deposited structure of PDB entry 1avf contains 2 copies of SCOP domain 50646 (Pepsin-like) in Gastricsin. Showing 1 copy in chain D [auth J].