Function and Biology Details
Endohydrolysis of RNA in RNA/DNA hybrids. Three different cleavage modes: 1. sequence-specific internal cleavage of RNA. Human immunodeficiency virus type 1 and Moloney murine leukemia virus enzymes prefer to cleave the RNA strand one nucleotide away from the RNA-DNA junction. 2. RNA 5'-end directed cleavage 13-19 nucleotides from the RNA end. 3. DNA 3'-end directed cleavage 15-20 nucleotides away from the primer terminus.
Deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1)
Specific for a P1 residue that is hydrophobic, and P1' variable, but often Pro.
3'-end directed exonucleolytic cleavage of viral RNA-DNA hybrid
- not assigned
Structure analysis Details
Length: 99 amino acids
Theoretical weight: 10.72 KDa
Source organism: Human immunodeficiency virus 1
Expression system: Escherichia coli
- Canonical: P04587 (Residues: 501-599; Coverage: 7%)
Sequence domains: Retroviral aspartyl protease
Structure domains: Acid Proteases