EMDB EMD-6784

Single particle reconstruction
3.2Å resolution

Large subunit of Trichomonas vaginalis ribosome

Map released:
Last modified:
Overview of EMD-6784
Source organism: Trichomonas vaginalis [5722]
Fitted atomic model: 5xy3
Related EM entries by publication: EMD-6778, EMD-6780, EMD-6788
Primary publication:
Cryo-EM structures of the 80S ribosomes from human parasites Trichomonas vaginalis and Toxoplasma gondii
Li Z, Guo Q, Zheng L, Ji Y, Xie YT, Lai DH, Lun ZR, Suo X, Gao N
Cell Res. 27 1275-1288 (2017)
PMID: 28809395

Function and Biology Details

Sample name: Large subunit of Trichomonas vaginalis ribosome
Nucleic acids: 25S ribosomal RNA, 5S ribosomal RNA, 5.8S ribosomal RNA
Proteins: Large subunit of Trichomonas vaginalis ribosome, Ribosomal protein L8, putative, Uncharacterized protein, Ribosomal protein, putative, Ribosomal protein L5, 60S ribosomal protein L6, putative, Ribosomal protein L30p/L7e, putative, Ribosomal protein L7Ae, putative, Ribosomal protein L6, putative, Ribosomal protein, putative, 60S ribosomal protein L11, putative, Ribosomal protein L13e, putative, Ribosomal protein L14, putative, Ribosomal protein L15, Ribosomal protein L13, putative, Ribosomal protein L22, putative, 60S ribosomal protein L18, putative, 60S ribosomal protein L19-3, putative, 60S ribosomal protein L18a, Ribosomal protein L21e, putative, 60S ribosomal protein L22-1, putative, 60S ribosomal protein L23, putative, Ribosomal protein L24e, putative, Ribosomal protein L23, putative, Ribosomal protein L24, putative, Ribosomal protein L27e, putative, Uncharacterized protein, 60S ribosomal protein L29, 60S ribosomal protein L30, putative, Ribosomal protein L31e, putative, Ribosomal protein L32, putative, Ribosomal protein L35Ae, putative, Ribosomal protein L34e, putative, Ribosomal protein L29, putative, Ribosomal protein L36e, putative, Ribosomal protein L37, Ribosomal protein L38e, putative, 60S ribosomal protein L39, putative, Ubiquitin, putative, 60S ribosomal protein L44, putative, Uncharacterized protein

Experimental Information Details

Resolution: 3.2Å
Resolution method: FSC 0.143 CUT-OFF
Microscope: FEI TITAN KRIOS
Detector: GATAN K2 (4k x 4k)