EMD-0048
Cryo-EM reconstruction of yeast 80S ribosome in complex with mRNA, tRNA and eEF2 (GDP+AlF4/sordarin)
EMD-0048
Single-particle3.9 Å
Deposition: 07/06/2018Map released: 11/07/2018
Last modified: 04/08/2021
Name: 80S ribosome in complex with mRNA, tRNA and eEF2 in presence of GDP, AlF4 and anti-fungal drug (sordarin)
Summary:
- Complex
- 80S ribosome in complex with mRNA, tRNA and eEF2 in presence of GDP, AlF4 and anti-fungal drug (sordarin)
- 80S ribosome
- mRNA
- RNA
- Saccharomyces cerevisiae S288C 35S pre-ribosomal RNA (RDN37-1), miscRNA
- 5S ribosomal RNA
- 5.8S ribosomal RNA
- 18S ribosomal RNA
- Transfer RNA - Phe
- Messenger RNA
- Protein
- 60S acidic ribosomal protein P0
- 60S ribosomal protein L12-A
- 60S ribosomal protein L2-A
- 60S ribosomal protein L3
- 60S ribosomal protein L4-A
- 60S ribosomal protein L5
- 60S ribosomal protein L6-A
- 60S ribosomal protein L7-A
- 60S ribosomal protein L8-A
- 60S ribosomal protein L9-A
- 60S ribosomal protein L10
- 60S ribosomal protein L11-B
- 60S ribosomal protein L13-A
- 60S ribosomal protein L14-A
- 60S ribosomal protein L15-A
- 60S ribosomal protein L16-A
- 60S ribosomal protein L17-A
- 60S ribosomal protein L18-A
- 60S ribosomal protein L19-A
- 60S ribosomal protein L20-A
- 60S ribosomal protein L21-A
- 60S ribosomal protein L22-A
- 60S ribosomal protein L23-A
- 60S ribosomal protein L24-A
- 60S ribosomal protein L25
- 60S ribosomal protein L26-A
- 60S ribosomal protein L27-A
- 60S ribosomal protein L28
- 60S ribosomal protein L29
- 60S ribosomal protein L30
- 60S ribosomal protein L31-A
- 60S ribosomal protein L32
- 60S ribosomal protein L33-A
- 60S ribosomal protein L34-A
- 60S ribosomal protein L35-A
- 60S ribosomal protein L36-A
- 60S ribosomal protein L37-A
- 60S ribosomal protein L38
- 60S ribosomal protein L39
- Ubiquitin-60S ribosomal protein L40
- 60S ribosomal protein L41-B
- 60S ribosomal protein L42-A
- 60S ribosomal protein L43-A
- 40S ribosomal protein S0-A
- 40S ribosomal protein S1-A
- 40S ribosomal protein S2
- 40S ribosomal protein S3
- 40S ribosomal protein S4-A
- 40S ribosomal protein S5
- 40S ribosomal protein S6-A
- 40S ribosomal protein S7-A
- 40S ribosomal protein S8-A
- 40S ribosomal protein S9-A
- 40S ribosomal protein S10-A
- 40S ribosomal protein S11-A
- 40S ribosomal protein S12
- 40S ribosomal protein S13
- 40S ribosomal protein S14-B
- 40S ribosomal protein S15
- 40S ribosomal protein S16-A
- 40S ribosomal protein S17-B
- 40S ribosomal protein S18-A
- 40S ribosomal protein S19-A
- 40S ribosomal protein S20
- 40S ribosomal protein S21-A
- 40S ribosomal protein S22-A
- 40S ribosomal protein S23-A
- 40S ribosomal protein S24-A
- 40S ribosomal protein S25-A
- 40S ribosomal protein S26-B
- 40S ribosomal protein S27-A
- 40S ribosomal protein S28-A
- 40S ribosomal protein S29-A
- 40S ribosomal protein S30-A
- Guanine nucleotide-binding protein subunit beta-like protein
- Ubiquitin-40S ribosomal protein S31
- 60S ribosomal protein L1-A
- Elongation factor 2
- Ligand
Name: 80S ribosome in complex with mRNA, tRNA and eEF2 in presence of GDP, AlF4 and anti-fungal drug (sordarin)
Molecular weight
| Experimental | Theoretical | Method |
|---|---|---|
| - | 3 MDa | - |
Name: mRNA
Natural source [1]
Recombinant Expression [1]
| Organism | Strain | Cell | Plasmid |
|---|---|---|---|
| synthetic construct | - | - | - |
Name: Saccharomyces cerevisiae S288C 35S pre-ribosomal RNA (RDN37-1), miscRNA
Number of copies: 1
Number of copies: 1
Natural source
Organism: Baker's yeast
Molecular weight
| Experimental | Theoretical | Method |
|---|---|---|
| - | 1 MDa | - |
Name: 5S ribosomal RNA
Number of copies: 1
Number of copies: 1
Natural source
Molecular weight
| Experimental | Theoretical | Method |
|---|---|---|
| - | 38 kDa | - |
Name: 5.8S ribosomal RNA
Number of copies: 1
Number of copies: 1
Natural source
Molecular weight
| Experimental | Theoretical | Method |
|---|---|---|
| - | 50 kDa | - |
Name: 18S ribosomal RNA
Number of copies: 1
Number of copies: 1
Natural source
Molecular weight
| Experimental | Theoretical | Method |
|---|---|---|
| - | 578 kDa | - |
Name: Transfer RNA - Phe
Number of copies: 1
Number of copies: 1
Natural source
Molecular weight
| Experimental | Theoretical | Method |
|---|---|---|
| - | 24 kDa | - |
Name: Messenger RNA
Number of copies: 1
Number of copies: 1
Natural source
Molecular weight
| Experimental | Theoretical | Method |
|---|---|---|
| - | 2 kDa | - |
Name: 60S acidic ribosomal protein P0
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Domains
Natural source
Organism: Baker's yeast
Molecular weight
| Experimental | Theoretical | Method |
|---|---|---|
| - | 20 kDa | - |
Name: 60S ribosomal protein L12-A
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Domains
Gene Ontology [2]
Natural source
Organism: Baker's yeast
Molecular weight
| Experimental | Theoretical | Method |
|---|---|---|
| - | 10 kDa | - |
Name: 60S ribosomal protein L2-A
Number of copies: 1
UniProtKB UniProtKB PDBe-KB PDBe-KB AlphaFold DB AlphaFold DB
Number of copies: 1
UniProtKB UniProtKB PDBe-KB PDBe-KB AlphaFold DB AlphaFold DB
Domains
Gene Ontology [6]
Biological process:
cytoplasmic translation
Molecular function:
structural constituent of ribosome RNA binding rRNA binding
Cellular location:
cytosol cytosolic large ribosomal subunit
cytoplasmic translation
Molecular function:
structural constituent of ribosome RNA binding rRNA binding
Cellular location:
cytosol cytosolic large ribosomal subunit
Natural source
Organism: Baker's yeast
Molecular weight
| Experimental | Theoretical | Method |
|---|---|---|
| - | 27 kDa | - |
Name: 60S ribosomal protein L3
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Domains
Gene Ontology [10]
Biological process:
translation cytoplasmic translation ribosomal large subunit assembly maintenance of translational fidelity rRNA processing
Molecular function:
structural constituent of ribosome RNA binding
Cellular location:
cytoplasm cytosol cytosolic large ribosomal subunit
translation cytoplasmic translation ribosomal large subunit assembly maintenance of translational fidelity rRNA processing
Molecular function:
structural constituent of ribosome RNA binding
Cellular location:
cytoplasm cytosol cytosolic large ribosomal subunit
Natural source
Organism: Baker's yeast
Molecular weight
| Experimental | Theoretical | Method |
|---|---|---|
| - | 43 kDa | - |
Name: 60S ribosomal protein L4-A
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Domains
Gene Ontology [6]
Biological process:
cytoplasmic translation
Molecular function:
structural constituent of ribosome RNA binding
Cellular location:
cytosol cytosolic large ribosomal subunit nucleus
cytoplasmic translation
Molecular function:
structural constituent of ribosome RNA binding
Cellular location:
cytosol cytosolic large ribosomal subunit nucleus
Natural source
Organism: Baker's yeast
Molecular weight
| Experimental | Theoretical | Method |
|---|---|---|
| - | 39 kDa | - |
Name: 60S ribosomal protein L5
Number of copies: 1
UniProtKB UniProtKB PDBe-KB PDBe-KB AlphaFold DB AlphaFold DB
Number of copies: 1
UniProtKB UniProtKB PDBe-KB PDBe-KB AlphaFold DB AlphaFold DB
Domains
Gene Ontology [8]
Biological process:
cytoplasmic translation ribosomal large subunit assembly
Molecular function:
5S rRNA binding structural constituent of ribosome
Cellular location:
cytoplasm cytosol cytosolic large ribosomal subunit nucleus
cytoplasmic translation ribosomal large subunit assembly
Molecular function:
5S rRNA binding structural constituent of ribosome
Cellular location:
cytoplasm cytosol cytosolic large ribosomal subunit nucleus
Natural source
Organism: Baker's yeast
Molecular weight
| Experimental | Theoretical | Method |
|---|---|---|
| - | 33 kDa | - |
Name: 60S ribosomal protein L6-A
Number of copies: 1
UniProtKB UniProtKB PDBe-KB PDBe-KB AlphaFold DB AlphaFold DB
Number of copies: 1
UniProtKB UniProtKB PDBe-KB PDBe-KB AlphaFold DB AlphaFold DB
Domains
Gene Ontology [6]
Biological process:
cytoplasmic translation ribosomal large subunit assembly
Molecular function:
structural constituent of ribosome RNA binding
Cellular location:
cytosol cytosolic large ribosomal subunit
cytoplasmic translation ribosomal large subunit assembly
Molecular function:
structural constituent of ribosome RNA binding
Cellular location:
cytosol cytosolic large ribosomal subunit
Natural source
Organism: Baker's yeast
Molecular weight
| Experimental | Theoretical | Method |
|---|---|---|
| - | 19 kDa | - |
Name: 60S ribosomal protein L7-A
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Domains
Gene Ontology [9]
Biological process:
ribosomal large subunit biogenesis cytoplasmic translation maturation of LSU-rRNA maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
Molecular function:
structural constituent of ribosome RNA binding
Cellular location:
cytoplasm cytosolic large ribosomal subunit cytosol
ribosomal large subunit biogenesis cytoplasmic translation maturation of LSU-rRNA maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
Molecular function:
structural constituent of ribosome RNA binding
Cellular location:
cytoplasm cytosolic large ribosomal subunit cytosol
Natural source
Organism: Baker's yeast
Molecular weight
| Experimental | Theoretical | Method |
|---|---|---|
| - | 25 kDa | - |
Name: 60S ribosomal protein L8-A
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Domains
Gene Ontology [6]
Biological process:
cytoplasmic translation maturation of LSU-rRNA
Molecular function:
structural constituent of ribosome RNA binding
Cellular location:
cytosol cytosolic large ribosomal subunit
cytoplasmic translation maturation of LSU-rRNA
Molecular function:
structural constituent of ribosome RNA binding
Cellular location:
cytosol cytosolic large ribosomal subunit
Natural source
Organism: Baker's yeast
Molecular weight
| Experimental | Theoretical | Method |
|---|---|---|
| - | 25 kDa | - |
Name: 60S ribosomal protein L9-A
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Domains
Gene Ontology [5]
Biological process:
cytoplasmic translation
Molecular function:
rRNA binding structural constituent of ribosome
Cellular location:
cytosol cytosolic large ribosomal subunit
cytoplasmic translation
Molecular function:
rRNA binding structural constituent of ribosome
Cellular location:
cytosol cytosolic large ribosomal subunit
Natural source
Organism: Baker's yeast
Molecular weight
| Experimental | Theoretical | Method |
|---|---|---|
| - | 21 kDa | - |
Name: 60S ribosomal protein L10
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Domains
Gene Ontology [7]
Biological process:
translational termination ribosomal large subunit assembly cytoplasmic translation
Molecular function:
structural constituent of ribosome
Cellular location:
cytoplasm cytosolic large ribosomal subunit cytosol
translational termination ribosomal large subunit assembly cytoplasmic translation
Molecular function:
structural constituent of ribosome
Cellular location:
cytoplasm cytosolic large ribosomal subunit cytosol
Natural source
Organism: Baker's yeast
Molecular weight
| Experimental | Theoretical | Method |
|---|---|---|
| - | 25 kDa | - |
Name: 60S ribosomal protein L11-B
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Domains
Gene Ontology [8]
Biological process:
ribosomal large subunit assembly cytoplasmic translation
Molecular function:
rRNA binding structural constituent of ribosome RNA binding
Cellular location:
nucleus cytosol cytosolic large ribosomal subunit
ribosomal large subunit assembly cytoplasmic translation
Molecular function:
rRNA binding structural constituent of ribosome RNA binding
Cellular location:
nucleus cytosol cytosolic large ribosomal subunit
Natural source
Organism: Baker's yeast
Molecular weight
| Experimental | Theoretical | Method |
|---|---|---|
| - | 19 kDa | - |
Name: 60S ribosomal protein L13-A
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Natural source
Organism: Baker's yeast
Molecular weight
| Experimental | Theoretical | Method |
|---|---|---|
| - | 21 kDa | - |
Name: 60S ribosomal protein L14-A
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Domains
Gene Ontology [7]
Biological process:
ribosomal large subunit biogenesis macroautophagy cytoplasmic translation
Molecular function:
structural constituent of ribosome RNA binding
Cellular location:
cytosolic large ribosomal subunit cytosol
ribosomal large subunit biogenesis macroautophagy cytoplasmic translation
Molecular function:
structural constituent of ribosome RNA binding
Cellular location:
cytosolic large ribosomal subunit cytosol
Natural source
Organism: Baker's yeast
Molecular weight
| Experimental | Theoretical | Method |
|---|---|---|
| - | 14 kDa | - |
Name: 60S ribosomal protein L15-A
Number of copies: 1
UniProtKB UniProtKB PDBe-KB PDBe-KB AlphaFold DB AlphaFold DB
Number of copies: 1
UniProtKB UniProtKB PDBe-KB PDBe-KB AlphaFold DB AlphaFold DB
Domains
Gene Ontology [5]
Biological process:
cytoplasmic translation
Molecular function:
RNA binding structural constituent of ribosome
Cellular location:
cytosol cytosolic large ribosomal subunit
cytoplasmic translation
Molecular function:
RNA binding structural constituent of ribosome
Cellular location:
cytosol cytosolic large ribosomal subunit
Natural source
Organism: Baker's yeast
Molecular weight
| Experimental | Theoretical | Method |
|---|---|---|
| - | 24 kDa | - |
Name: 60S ribosomal protein L16-A
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Domains
Gene Ontology [8]
Biological process:
cytoplasmic translation negative regulation of translation
Molecular function:
structural constituent of ribosome mRNA binding RNA binding
Cellular location:
cytosol cytosolic large ribosomal subunit ribosome
cytoplasmic translation negative regulation of translation
Molecular function:
structural constituent of ribosome mRNA binding RNA binding
Cellular location:
cytosol cytosolic large ribosomal subunit ribosome
Natural source
Organism: Baker's yeast
Molecular weight
| Experimental | Theoretical | Method |
|---|---|---|
| - | 22 kDa | - |
Name: 60S ribosomal protein L17-A
Number of copies: 1
UniProtKB UniProtKB PDBe-KB PDBe-KB AlphaFold DB AlphaFold DB
Number of copies: 1
UniProtKB UniProtKB PDBe-KB PDBe-KB AlphaFold DB AlphaFold DB
Domains
Gene Ontology [7]
Biological process:
cytoplasmic translation cleavage in ITS2 between 5.8S rRNA and LSU-rRNA of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
Molecular function:
structural constituent of ribosome
Cellular location:
cytosolic large ribosomal subunit cytoplasm preribosome, large subunit precursor cytosol
cytoplasmic translation cleavage in ITS2 between 5.8S rRNA and LSU-rRNA of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
Molecular function:
structural constituent of ribosome
Cellular location:
cytosolic large ribosomal subunit cytoplasm preribosome, large subunit precursor cytosol
Natural source
Organism: Baker's yeast
Molecular weight
| Experimental | Theoretical | Method |
|---|---|---|
| - | 20 kDa | - |
Name: 60S ribosomal protein L18-A
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Domains
Gene Ontology [5]
Biological process:
cytoplasmic translation
Molecular function:
structural constituent of ribosome RNA binding
Cellular location:
cytosolic large ribosomal subunit cytosol
cytoplasmic translation
Molecular function:
structural constituent of ribosome RNA binding
Cellular location:
cytosolic large ribosomal subunit cytosol
Natural source
Organism: Baker's yeast
Molecular weight
| Experimental | Theoretical | Method |
|---|---|---|
| - | 20 kDa | - |
Name: 60S ribosomal protein L19-A
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Domains
Gene Ontology [5]
Biological process:
cytoplasmic translation
Molecular function:
structural constituent of ribosome RNA binding
Cellular location:
cytosolic large ribosomal subunit cytosol
cytoplasmic translation
Molecular function:
structural constituent of ribosome RNA binding
Cellular location:
cytosolic large ribosomal subunit cytosol
Natural source
Organism: Baker's yeast
Molecular weight
| Experimental | Theoretical | Method |
|---|---|---|
| - | 21 kDa | - |
Name: 60S ribosomal protein L20-A
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Domains
Gene Ontology [4]
Biological process:
cytoplasmic translation
Molecular function:
structural constituent of ribosome
Cellular location:
cytosolic large ribosomal subunit cytosol
cytoplasmic translation
Molecular function:
structural constituent of ribosome
Cellular location:
cytosolic large ribosomal subunit cytosol
Natural source
Organism: Baker's yeast
Molecular weight
| Experimental | Theoretical | Method |
|---|---|---|
| - | 20 kDa | - |
Name: 60S ribosomal protein L21-A
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Natural source
Organism: Baker's yeast
Molecular weight
| Experimental | Theoretical | Method |
|---|---|---|
| - | 18 kDa | - |
Name: 60S ribosomal protein L22-A
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Domains
Gene Ontology [1]
Natural source
Organism: Baker's yeast
Molecular weight
| Experimental | Theoretical | Method |
|---|---|---|
| - | 11 kDa | - |
Name: 60S ribosomal protein L23-A
Number of copies: 1
UniProtKB UniProtKB PDBe-KB PDBe-KB AlphaFold DB AlphaFold DB
Number of copies: 1
UniProtKB UniProtKB PDBe-KB PDBe-KB AlphaFold DB AlphaFold DB
Domains
Gene Ontology [5]
Biological process:
cytoplasmic translation
Molecular function:
large ribosomal subunit rRNA binding structural constituent of ribosome
Cellular location:
cytosolic large ribosomal subunit cytosol
cytoplasmic translation
Molecular function:
large ribosomal subunit rRNA binding structural constituent of ribosome
Cellular location:
cytosolic large ribosomal subunit cytosol
Natural source
Organism: Baker's yeast
Molecular weight
| Experimental | Theoretical | Method |
|---|---|---|
| - | 14 kDa | - |
Name: 60S ribosomal protein L24-A
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Domains
Natural source
Organism: Baker's yeast
Molecular weight
| Experimental | Theoretical | Method |
|---|---|---|
| - | 7 kDa | - |
Name: 60S ribosomal protein L25
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Domains
Gene Ontology [2]
Natural source
Organism: Baker's yeast
Molecular weight
| Experimental | Theoretical | Method |
|---|---|---|
| - | 13 kDa | - |
Name: 60S ribosomal protein L26-A
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Domains
Gene Ontology [6]
Biological process:
ribosomal large subunit biogenesis cytoplasmic translation
Molecular function:
structural constituent of ribosome RNA binding
Cellular location:
cytosolic large ribosomal subunit cytosol
ribosomal large subunit biogenesis cytoplasmic translation
Molecular function:
structural constituent of ribosome RNA binding
Cellular location:
cytosolic large ribosomal subunit cytosol
Natural source
Organism: Baker's yeast
Molecular weight
| Experimental | Theoretical | Method |
|---|---|---|
| - | 14 kDa | - |
Name: 60S ribosomal protein L27-A
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Domains
Gene Ontology [4]
Biological process:
cytoplasmic translation
Molecular function:
structural constituent of ribosome
Cellular location:
cytosolic large ribosomal subunit cytosol
cytoplasmic translation
Molecular function:
structural constituent of ribosome
Cellular location:
cytosolic large ribosomal subunit cytosol
Natural source
Organism: Baker's yeast
Molecular weight
| Experimental | Theoretical | Method |
|---|---|---|
| - | 15 kDa | - |
Name: 60S ribosomal protein L28
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Domains
Gene Ontology [7]
Biological process:
cytoplasmic translation
Molecular function:
RNA binding structural constituent of ribosome
Cellular location:
cytoplasm cytosol cytosolic large ribosomal subunit nucleus
cytoplasmic translation
Molecular function:
RNA binding structural constituent of ribosome
Cellular location:
cytoplasm cytosol cytosolic large ribosomal subunit nucleus
Natural source
Organism: Baker's yeast
Molecular weight
| Experimental | Theoretical | Method |
|---|---|---|
| - | 16 kDa | - |
Name: 60S ribosomal protein L29
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Natural source
Organism: Baker's yeast
Molecular weight
| Experimental | Theoretical | Method |
|---|---|---|
| - | 6 kDa | - |
Name: 60S ribosomal protein L30
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Domains
Gene Ontology [9]
Biological process:
rRNA processing cytoplasmic translation negative regulation of mRNA splicing, via spliceosome
Molecular function:
structural constituent of ribosome pre-mRNA 5'-splice site binding RNA binding
Cellular location:
cytosol cytosolic large ribosomal subunit cytoplasm
rRNA processing cytoplasmic translation negative regulation of mRNA splicing, via spliceosome
Molecular function:
structural constituent of ribosome pre-mRNA 5'-splice site binding RNA binding
Cellular location:
cytosol cytosolic large ribosomal subunit cytoplasm
Natural source
Organism: Baker's yeast
Molecular weight
| Experimental | Theoretical | Method |
|---|---|---|
| - | 10 kDa | - |
Name: 60S ribosomal protein L31-A
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Domains
Gene Ontology [5]
Biological process:
cytoplasmic translation regulation of translational fidelity
Molecular function:
structural constituent of ribosome
Cellular location:
cytosol cytosolic large ribosomal subunit
cytoplasmic translation regulation of translational fidelity
Molecular function:
structural constituent of ribosome
Cellular location:
cytosol cytosolic large ribosomal subunit
Natural source
Organism: Baker's yeast
Molecular weight
| Experimental | Theoretical | Method |
|---|---|---|
| - | 12 kDa | - |
Name: 60S ribosomal protein L32
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Natural source
Organism: Baker's yeast
Molecular weight
| Experimental | Theoretical | Method |
|---|---|---|
| - | 14 kDa | - |
Name: 60S ribosomal protein L33-A
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Domains
Gene Ontology [5]
Biological process:
ribosomal large subunit biogenesis cytoplasmic translation
Molecular function:
structural constituent of ribosome
Cellular location:
cytosol cytosolic large ribosomal subunit
ribosomal large subunit biogenesis cytoplasmic translation
Molecular function:
structural constituent of ribosome
Cellular location:
cytosol cytosolic large ribosomal subunit
Natural source
Organism: Baker's yeast
Molecular weight
| Experimental | Theoretical | Method |
|---|---|---|
| - | 12 kDa | - |
Name: 60S ribosomal protein L34-A
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Natural source
Organism: Baker's yeast
Molecular weight
| Experimental | Theoretical | Method |
|---|---|---|
| - | 12 kDa | - |
Name: 60S ribosomal protein L35-A
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Domains
Gene Ontology [7]
Biological process:
cytoplasmic translation maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
Molecular function:
mRNA binding structural constituent of ribosome
Cellular location:
preribosome, large subunit precursor cytosolic large ribosomal subunit cytosol
cytoplasmic translation maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
Molecular function:
mRNA binding structural constituent of ribosome
Cellular location:
preribosome, large subunit precursor cytosolic large ribosomal subunit cytosol
Natural source
Organism: Baker's yeast
Molecular weight
| Experimental | Theoretical | Method |
|---|---|---|
| - | 13 kDa | - |
Name: 60S ribosomal protein L36-A
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Domains
Gene Ontology [5]
Biological process:
cytoplasmic translation
Molecular function:
RNA binding structural constituent of ribosome
Cellular location:
cytosol cytosolic large ribosomal subunit
cytoplasmic translation
Molecular function:
RNA binding structural constituent of ribosome
Cellular location:
cytosol cytosolic large ribosomal subunit
Natural source
Organism: Baker's yeast
Molecular weight
| Experimental | Theoretical | Method |
|---|---|---|
| - | 11 kDa | - |
Name: 60S ribosomal protein L37-A
Number of copies: 1
UniProtKB UniProtKB PDBe-KB PDBe-KB AlphaFold DB AlphaFold DB
Number of copies: 1
UniProtKB UniProtKB PDBe-KB PDBe-KB AlphaFold DB AlphaFold DB
Domains
Gene Ontology [9]
Biological process:
cytoplasmic translation cleavage in ITS2 between 5.8S rRNA and LSU-rRNA of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
Molecular function:
RNA binding rRNA binding structural constituent of ribosome metal ion binding
Cellular location:
preribosome, large subunit precursor cytosol cytosolic large ribosomal subunit
cytoplasmic translation cleavage in ITS2 between 5.8S rRNA and LSU-rRNA of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
Molecular function:
RNA binding rRNA binding structural constituent of ribosome metal ion binding
Cellular location:
preribosome, large subunit precursor cytosol cytosolic large ribosomal subunit
Natural source
Organism: Baker's yeast
Molecular weight
| Experimental | Theoretical | Method |
|---|---|---|
| - | 9 kDa | - |
Name: 60S ribosomal protein L38
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Domains
Gene Ontology [7]
Biological process:
protein-RNA complex assembly ribonucleoprotein complex assembly cytoplasmic translation
Molecular function:
structural constituent of ribosome
Cellular location:
cytoplasm cytosol cytosolic large ribosomal subunit
protein-RNA complex assembly ribonucleoprotein complex assembly cytoplasmic translation
Molecular function:
structural constituent of ribosome
Cellular location:
cytoplasm cytosol cytosolic large ribosomal subunit
Natural source
Organism: Baker's yeast
Molecular weight
| Experimental | Theoretical | Method |
|---|---|---|
| - | 8 kDa | - |
Name: 60S ribosomal protein L39
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Natural source
Organism: Baker's yeast
Molecular weight
| Experimental | Theoretical | Method |
|---|---|---|
| - | 6 kDa | - |
Name: Ubiquitin-60S ribosomal protein L40
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Domains
Gene Ontology [1]
Natural source
Organism: Baker's yeast
Molecular weight
| Experimental | Theoretical | Method |
|---|---|---|
| - | 6 kDa | - |
Name: 60S ribosomal protein L41-B
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Natural source
Organism: Baker's yeast
Molecular weight
| Experimental | Theoretical | Method |
|---|---|---|
| - | 3 kDa | - |
Name: 60S ribosomal protein L42-A
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Domains
Gene Ontology [6]
Biological process:
response to cycloheximide response to antibiotic cytoplasmic translation
Molecular function:
structural constituent of ribosome
Cellular location:
cytosol cytosolic large ribosomal subunit
response to cycloheximide response to antibiotic cytoplasmic translation
Molecular function:
structural constituent of ribosome
Cellular location:
cytosol cytosolic large ribosomal subunit
Natural source
Organism: Baker's yeast
Molecular weight
| Experimental | Theoretical | Method |
|---|---|---|
| - | 12 kDa | - |
Name: 60S ribosomal protein L43-A
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Natural source
Organism: Baker's yeast
Molecular weight
| Experimental | Theoretical | Method |
|---|---|---|
| - | 9 kDa | - |
Name: 40S ribosomal protein S0-A
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Domains
Gene Ontology [2]
Natural source
Organism: Baker's yeast
Molecular weight
| Experimental | Theoretical | Method |
|---|---|---|
| - | 22 kDa | - |
Name: 40S ribosomal protein S1-A
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Domains
Gene Ontology [1]
Natural source
Organism: Baker's yeast
Molecular weight
| Experimental | Theoretical | Method |
|---|---|---|
| - | 24 kDa | - |
Name: 40S ribosomal protein S2
Number of copies: 1
UniProtKB UniProtKB PDBe-KB PDBe-KB AlphaFold DB AlphaFold DB
Number of copies: 1
UniProtKB UniProtKB PDBe-KB PDBe-KB AlphaFold DB AlphaFold DB
Domains
Gene Ontology [2]
Natural source
Organism: Baker's yeast
Molecular weight
| Experimental | Theoretical | Method |
|---|---|---|
| - | 23 kDa | - |
Name: 40S ribosomal protein S3
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Domains
Gene Ontology [13]
Biological process:
cytoplasmic translation ribosomal small subunit export from nucleus rRNA export from nucleus
Molecular function:
protein kinase A catalytic subunit binding structural constituent of ribosome DNA-(apurinic or apyrimidinic site) endonuclease activity RNA binding
Cellular location:
preribosome, small subunit precursor cytosol cytosolic small ribosomal subunit nucleus cytoplasm 90S preribosome
cytoplasmic translation ribosomal small subunit export from nucleus rRNA export from nucleus
Molecular function:
protein kinase A catalytic subunit binding structural constituent of ribosome DNA-(apurinic or apyrimidinic site) endonuclease activity RNA binding
Cellular location:
preribosome, small subunit precursor cytosol cytosolic small ribosomal subunit nucleus cytoplasm 90S preribosome
Natural source
Organism: Baker's yeast
Molecular weight
| Experimental | Theoretical | Method |
|---|---|---|
| - | 24 kDa | - |
Name: 40S ribosomal protein S4-A
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Domains
Gene Ontology [9]
Biological process:
translation cytoplasmic translation
Molecular function:
structural constituent of ribosome rRNA binding RNA binding
Cellular location:
cytosolic small ribosomal subunit 90S preribosome cytosol cytoplasm
translation cytoplasmic translation
Molecular function:
structural constituent of ribosome rRNA binding RNA binding
Cellular location:
cytosolic small ribosomal subunit 90S preribosome cytosol cytoplasm
Natural source
Organism: Baker's yeast
Molecular weight
| Experimental | Theoretical | Method |
|---|---|---|
| - | 29 kDa | - |
Name: 40S ribosomal protein S5
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Domains
Gene Ontology [13]
Biological process:
cytoplasmic translation rRNA export from nucleus regulation of translational fidelity ribosomal small subunit assembly translation
Molecular function:
rRNA binding structural constituent of ribosome mRNA binding
Cellular location:
cytosolic small ribosomal subunit 90S preribosome cytoplasm ribosome cytosol
cytoplasmic translation rRNA export from nucleus regulation of translational fidelity ribosomal small subunit assembly translation
Molecular function:
rRNA binding structural constituent of ribosome mRNA binding
Cellular location:
cytosolic small ribosomal subunit 90S preribosome cytoplasm ribosome cytosol
Natural source
Organism: Baker's yeast
Molecular weight
| Experimental | Theoretical | Method |
|---|---|---|
| - | 22 kDa | - |
Name: 40S ribosomal protein S6-A
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Domains
Gene Ontology [10]
Biological process:
translation maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) cytoplasmic translation
Molecular function:
structural constituent of ribosome
Cellular location:
cytosol small-subunit processome cytosolic small ribosomal subunit nucleolus nucleoplasm 90S preribosome
translation maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) cytoplasmic translation
Molecular function:
structural constituent of ribosome
Cellular location:
cytosol small-subunit processome cytosolic small ribosomal subunit nucleolus nucleoplasm 90S preribosome
Natural source
Organism: Baker's yeast
Molecular weight
| Experimental | Theoretical | Method |
|---|---|---|
| - | 25 kDa | - |
Name: 40S ribosomal protein S7-A
Number of copies: 1
UniProtKB UniProtKB PDBe-KB PDBe-KB AlphaFold DB AlphaFold DB
Number of copies: 1
UniProtKB UniProtKB PDBe-KB PDBe-KB AlphaFold DB AlphaFold DB
Domains
Gene Ontology [11]
Biological process:
ribosome biogenesis cytoplasmic translation rRNA processing ribosomal small subunit biogenesis
Molecular function:
structural constituent of ribosome
Cellular location:
cytosolic small ribosomal subunit 90S preribosome nucleolus cytosol small-subunit processome nucleoplasm
ribosome biogenesis cytoplasmic translation rRNA processing ribosomal small subunit biogenesis
Molecular function:
structural constituent of ribosome
Cellular location:
cytosolic small ribosomal subunit 90S preribosome nucleolus cytosol small-subunit processome nucleoplasm
Natural source
Organism: Baker's yeast
Molecular weight
| Experimental | Theoretical | Method |
|---|---|---|
| - | 21 kDa | - |
Name: 40S ribosomal protein S8-A
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Domains
Gene Ontology [7]
Biological process:
translation maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) cytoplasmic translation
Molecular function:
structural constituent of ribosome
Cellular location:
90S preribosome cytosol cytosolic small ribosomal subunit
translation maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) cytoplasmic translation
Molecular function:
structural constituent of ribosome
Cellular location:
90S preribosome cytosol cytosolic small ribosomal subunit
Natural source
Organism: Baker's yeast
Molecular weight
| Experimental | Theoretical | Method |
|---|---|---|
| - | 22 kDa | - |
Name: 40S ribosomal protein S9-A
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Domains
Gene Ontology [15]
Biological process:
translation ribosomal small subunit biogenesis positive regulation of translational fidelity cytoplasmic translation maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
Molecular function:
structural constituent of ribosome rRNA binding
Cellular location:
cytosolic small ribosomal subunit 90S preribosome cytosol nucleoplasm small-subunit processome small ribosomal subunit cytoplasm nucleolus
translation ribosomal small subunit biogenesis positive regulation of translational fidelity cytoplasmic translation maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
Molecular function:
structural constituent of ribosome rRNA binding
Cellular location:
cytosolic small ribosomal subunit 90S preribosome cytosol nucleoplasm small-subunit processome small ribosomal subunit cytoplasm nucleolus
Natural source
Organism: Baker's yeast
Molecular weight
| Experimental | Theoretical | Method |
|---|---|---|
| - | 21 kDa | - |
Name: 40S ribosomal protein S10-A
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Natural source
Organism: Baker's yeast
Molecular weight
| Experimental | Theoretical | Method |
|---|---|---|
| - | 12 kDa | - |
Name: 40S ribosomal protein S11-A
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Domains
Gene Ontology [9]
Biological process:
translation ribosomal small subunit assembly cytoplasmic translation maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
Molecular function:
structural constituent of ribosome rRNA binding
Cellular location:
cytosol 90S preribosome cytosolic small ribosomal subunit
translation ribosomal small subunit assembly cytoplasmic translation maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
Molecular function:
structural constituent of ribosome rRNA binding
Cellular location:
cytosol 90S preribosome cytosolic small ribosomal subunit
Natural source
Organism: Baker's yeast
Molecular weight
| Experimental | Theoretical | Method |
|---|---|---|
| - | 17 kDa | - |
Name: 40S ribosomal protein S12
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Domains
Gene Ontology [1]
Natural source
Organism: Baker's yeast
Molecular weight
| Experimental | Theoretical | Method |
|---|---|---|
| - | 13 kDa | - |
Name: 40S ribosomal protein S13
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Natural source
Organism: Baker's yeast
Molecular weight
| Experimental | Theoretical | Method |
|---|---|---|
| - | 16 kDa | - |
Name: 40S ribosomal protein S14-B
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Domains
Gene Ontology [13]
Biological process:
maturation of SSU-rRNA ribosomal small subunit assembly maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) cytoplasmic translation translation
Molecular function:
RNA binding structural constituent of ribosome mRNA 5'-UTR binding small ribosomal subunit rRNA binding
Cellular location:
nucleolus small-subunit processome cytosol cytosolic small ribosomal subunit
maturation of SSU-rRNA ribosomal small subunit assembly maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) cytoplasmic translation translation
Molecular function:
RNA binding structural constituent of ribosome mRNA 5'-UTR binding small ribosomal subunit rRNA binding
Cellular location:
nucleolus small-subunit processome cytosol cytosolic small ribosomal subunit
Natural source
Organism: Baker's yeast
Molecular weight
| Experimental | Theoretical | Method |
|---|---|---|
| - | 13 kDa | - |
Name: 40S ribosomal protein S15
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Domains
Gene Ontology [2]
Natural source
Organism: Baker's yeast
Molecular weight
| Experimental | Theoretical | Method |
|---|---|---|
| - | 14 kDa | - |
Name: 40S ribosomal protein S16-A
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Domains
Gene Ontology [9]
Biological process:
translation maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) cytoplasmic translation
Molecular function:
structural constituent of ribosome RNA binding
Cellular location:
small ribosomal subunit cytosol 90S preribosome cytosolic small ribosomal subunit
translation maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) cytoplasmic translation
Molecular function:
structural constituent of ribosome RNA binding
Cellular location:
small ribosomal subunit cytosol 90S preribosome cytosolic small ribosomal subunit
Natural source
Organism: Baker's yeast
Molecular weight
| Experimental | Theoretical | Method |
|---|---|---|
| - | 15 kDa | - |
Name: 40S ribosomal protein S17-B
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Domains
Gene Ontology [5]
Biological process:
ribosomal small subunit assembly cytoplasmic translation
Molecular function:
structural constituent of ribosome
Cellular location:
cytosolic small ribosomal subunit cytosol
ribosomal small subunit assembly cytoplasmic translation
Molecular function:
structural constituent of ribosome
Cellular location:
cytosolic small ribosomal subunit cytosol
Natural source
Organism: Baker's yeast
Molecular weight
| Experimental | Theoretical | Method |
|---|---|---|
| - | 14 kDa | - |
Name: 40S ribosomal protein S18-A
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Natural source
Organism: Baker's yeast
Molecular weight
| Experimental | Theoretical | Method |
|---|---|---|
| - | 16 kDa | - |
Name: 40S ribosomal protein S19-A
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Domains
Gene Ontology [9]
Biological process:
translation rRNA export from nucleus cytoplasmic translation ribosomal small subunit assembly ribosomal small subunit biogenesis
Molecular function:
structural constituent of ribosome RNA binding
Cellular location:
cytosol cytosolic small ribosomal subunit
translation rRNA export from nucleus cytoplasmic translation ribosomal small subunit assembly ribosomal small subunit biogenesis
Molecular function:
structural constituent of ribosome RNA binding
Cellular location:
cytosol cytosolic small ribosomal subunit
Natural source
Organism: Baker's yeast
Molecular weight
| Experimental | Theoretical | Method |
|---|---|---|
| - | 15 kDa | - |
Name: 40S ribosomal protein S20
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Domains
Gene Ontology [2]
Natural source
Organism: Baker's yeast
Molecular weight
| Experimental | Theoretical | Method |
|---|---|---|
| - | 12 kDa | - |
Name: 40S ribosomal protein S21-A
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Domains
Gene Ontology [7]
Biological process:
translation endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) cytoplasmic translation endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
Molecular function:
structural constituent of ribosome
Cellular location:
cytosol cytosolic small ribosomal subunit
translation endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) cytoplasmic translation endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
Molecular function:
structural constituent of ribosome
Cellular location:
cytosol cytosolic small ribosomal subunit
Natural source
Organism: Baker's yeast
Molecular weight
| Experimental | Theoretical | Method |
|---|---|---|
| - | 9 kDa | - |
Name: 40S ribosomal protein S22-A
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Domains
Gene Ontology [4]
Biological process:
cytoplasmic translation
Molecular function:
structural constituent of ribosome
Cellular location:
cytosolic small ribosomal subunit cytosol
cytoplasmic translation
Molecular function:
structural constituent of ribosome
Cellular location:
cytosolic small ribosomal subunit cytosol
Natural source
Organism: Baker's yeast
Molecular weight
| Experimental | Theoretical | Method |
|---|---|---|
| - | 14 kDa | - |
Name: 40S ribosomal protein S23-A
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Domains
Gene Ontology [8]
Biological process:
maintenance of translational fidelity translation regulation of translational fidelity maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
Molecular function:
structural constituent of ribosome
Cellular location:
ribosome cytosol cytosolic small ribosomal subunit
maintenance of translational fidelity translation regulation of translational fidelity maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
Molecular function:
structural constituent of ribosome
Cellular location:
ribosome cytosol cytosolic small ribosomal subunit
Natural source
Organism: Baker's yeast
Molecular weight
| Experimental | Theoretical | Method |
|---|---|---|
| - | 15 kDa | - |
Name: 40S ribosomal protein S24-A
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Domains
Gene Ontology [6]
Biological process:
cytoplasmic translation maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
Molecular function:
structural constituent of ribosome
Cellular location:
cytosol mitochondrion cytosolic small ribosomal subunit
cytoplasmic translation maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
Molecular function:
structural constituent of ribosome
Cellular location:
cytosol mitochondrion cytosolic small ribosomal subunit
Natural source
Organism: Baker's yeast
Molecular weight
| Experimental | Theoretical | Method |
|---|---|---|
| - | 15 kDa | - |
Name: 40S ribosomal protein S25-A
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Domains
Natural source
Organism: Baker's yeast
Molecular weight
| Experimental | Theoretical | Method |
|---|---|---|
| - | 8 kDa | - |
Name: 40S ribosomal protein S26-B
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Domains
Gene Ontology [1]
Natural source
Organism: Baker's yeast
Molecular weight
| Experimental | Theoretical | Method |
|---|---|---|
| - | 11 kDa | - |
Name: 40S ribosomal protein S27-A
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Domains
Gene Ontology [10]
Biological process:
translation maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) cytoplasmic translation ribosomal small subunit assembly
Molecular function:
RNA binding structural constituent of ribosome metal ion binding
Cellular location:
cytosol cytosolic small ribosomal subunit cytoplasm
translation maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) cytoplasmic translation ribosomal small subunit assembly
Molecular function:
RNA binding structural constituent of ribosome metal ion binding
Cellular location:
cytosol cytosolic small ribosomal subunit cytoplasm
Natural source
Organism: Baker's yeast
Molecular weight
| Experimental | Theoretical | Method |
|---|---|---|
| - | 8 kDa | - |
Name: 40S ribosomal protein S28-A
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Natural source
Organism: Baker's yeast
Molecular weight
| Experimental | Theoretical | Method |
|---|---|---|
| - | 7 kDa | - |
Name: 40S ribosomal protein S29-A
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Domains
Gene Ontology [5]
Biological process:
cytoplasmic translation
Molecular function:
zinc ion binding structural constituent of ribosome
Cellular location:
cytosol cytosolic small ribosomal subunit
cytoplasmic translation
Molecular function:
zinc ion binding structural constituent of ribosome
Cellular location:
cytosol cytosolic small ribosomal subunit
Natural source
Organism: Baker's yeast
Molecular weight
| Experimental | Theoretical | Method |
|---|---|---|
| - | 6 kDa | - |
Name: 40S ribosomal protein S30-A
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Domains
Gene Ontology [5]
Biological process:
cytoplasmic translation
Molecular function:
structural constituent of ribosome
Cellular location:
cytosolic small ribosomal subunit cytoplasmic stress granule cytosol
cytoplasmic translation
Molecular function:
structural constituent of ribosome
Cellular location:
cytosolic small ribosomal subunit cytoplasmic stress granule cytosol
Natural source
Organism: Baker's yeast
Molecular weight
| Experimental | Theoretical | Method |
|---|---|---|
| - | 6 kDa | - |
Name: Guanine nucleotide-binding protein subunit beta-like protein
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Domains
Gene Ontology [22]
Biological process:
cytoplasmic translation positive regulation of protein phosphorylation regulation of cellular response to stress invasive growth in response to glucose limitation negative regulation of translation negative regulation of translational frameshifting negative regulation of glucose mediated signaling pathway mRNA destabilization negative regulation of gene expression G protein-coupled receptor signaling pathway protein localization rescue of stalled ribosome ribosome-associated ubiquitin-dependent protein catabolic process
Molecular function:
translation regulator activity G-protein alpha-subunit binding GDP-dissociation inhibitor activity ribosome binding protein kinase C binding
Cellular location:
nucleus cytoplasm cytosolic small ribosomal subunit cytosol
cytoplasmic translation positive regulation of protein phosphorylation regulation of cellular response to stress invasive growth in response to glucose limitation negative regulation of translation negative regulation of translational frameshifting negative regulation of glucose mediated signaling pathway mRNA destabilization negative regulation of gene expression G protein-coupled receptor signaling pathway protein localization rescue of stalled ribosome ribosome-associated ubiquitin-dependent protein catabolic process
Molecular function:
translation regulator activity G-protein alpha-subunit binding GDP-dissociation inhibitor activity ribosome binding protein kinase C binding
Cellular location:
nucleus cytoplasm cytosolic small ribosomal subunit cytosol
Natural source
Organism: Baker's yeast
Molecular weight
| Experimental | Theoretical | Method |
|---|---|---|
| - | 34 kDa | - |
Name: Ubiquitin-40S ribosomal protein S31
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Domains
Gene Ontology [1]
Natural source
Organism: Baker's yeast
Molecular weight
| Experimental | Theoretical | Method |
|---|---|---|
| - | 4 kDa | - |
Name: 60S ribosomal protein L1-A
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Domains
Gene Ontology [7]
Biological process:
ribosomal large subunit export from nucleus cytoplasmic translation maturation of LSU-rRNA
Molecular function:
structural constituent of ribosome RNA binding
Cellular location:
cytosol cytosolic large ribosomal subunit
ribosomal large subunit export from nucleus cytoplasmic translation maturation of LSU-rRNA
Molecular function:
structural constituent of ribosome RNA binding
Cellular location:
cytosol cytosolic large ribosomal subunit
Natural source
Organism: Baker's yeast
Molecular weight
| Experimental | Theoretical | Method |
|---|---|---|
| - | 22 kDa | - |
Name: Elongation factor 2
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Domains
Gene Ontology [13]
Biological process:
maintenance of translational fidelity positive regulation of translational elongation translational elongation
Molecular function:
protein-folding chaperone binding ribosome binding chaperone binding translation elongation factor activity GTP binding identical protein binding GTPase activity rRNA binding
Cellular location:
cytosol ribonucleoprotein complex
maintenance of translational fidelity positive regulation of translational elongation translational elongation
Molecular function:
protein-folding chaperone binding ribosome binding chaperone binding translation elongation factor activity GTP binding identical protein binding GTPase activity rRNA binding
Cellular location:
cytosol ribonucleoprotein complex
Natural source
Organism: Baker's yeast
Molecular weight
| Experimental | Theoretical | Method |
|---|---|---|
| - | 93 kDa | - |
Name: ZINC ION
HET code: ZN
Number of copies: 8
ChEMBL ChEBI DrugBank
HET code: ZN
Number of copies: 8
ChEMBL ChEBI DrugBank
Molecular weight
| Experimental | Theoretical | Method |
|---|---|---|
| - | 65 Da | - |
Name: [1R-(1.ALPHA.,3A.BETA.,4.BETA.,4A.BETA.,7.BETA.,7A.ALPHA.,8A.BETA.)]8A-[(6-DEOXY-4-O-METHYL-BETA-D-ALTROPYRANOSYLOXY)METHYL]-4-FORMYL-4,4A,5,6,7,7A,8,8A-OCTAHYDRO-7-METHYL-3-(1-METHYLETHYL)-1,4-METHANO-S-INDACENE-3A(1H)-CARBOXYLIC ACID
HET code: SO1
Number of copies: 1
HET code: SO1
Number of copies: 1
Molecular weight
| Experimental | Theoretical | Method |
|---|---|---|
| - | 494 Da | - |
Name: GUANOSINE-5'-DIPHOSPHATE
HET code: GDP
Number of copies: 1
ChEMBL ChEBI DrugBank
HET code: GDP
Number of copies: 1
ChEMBL ChEBI DrugBank
Molecular weight
| Experimental | Theoretical | Method |
|---|---|---|
| - | 443 Da | - |
Name: TETRAFLUOROALUMINATE ION
HET code: ALF
Number of copies: 1
ChEBI DrugBank
HET code: ALF
Number of copies: 1
ChEBI DrugBank
Molecular weight
| Experimental | Theoretical | Method |
|---|---|---|
| - | 102 Da | - |