data_4E60
#
_entry.id 4E60
#
_citation.id primary
_citation.title 'Interactions of Ba2+ with a non-self-complementary Z-type DNA duplex'
_citation.journal_abbrev 'To be published'
_citation.journal_volume ?
_citation.page_first ?
_citation.page_last ?
_citation.year ?
_citation.journal_id_ASTM ?
_citation.country ?
_citation.journal_id_ISSN ?
_citation.journal_id_CSD 0353
_citation.book_publisher ?
_citation.pdbx_database_id_PubMed ?
_citation.pdbx_database_id_DOI ?
#
loop_
_citation_author.citation_id
_citation_author.name
_citation_author.ordinal
_citation_author.identifier_ORCID
primary 'Mandal, P.K.' 1 ?
primary 'Venkadesh, S.' 2 ?
primary 'Gautham, N.' 3 ?
#
loop_
_entity.id
_entity.type
_entity.src_method
_entity.pdbx_description
_entity.formula_weight
_entity.pdbx_number_of_molecules
_entity.pdbx_ec
_entity.pdbx_mutation
_entity.pdbx_fragment
_entity.details
1 polymer syn "DNA (5'-D(*CP*AP*CP*GP*CP*G)-3')" 1794.206 1 ? ? ? ?
2 polymer syn "DNA (5'-D(*CP*GP*CP*GP*TP*G)-3')" 1825.216 1 ? ? ? ?
3 polymer syn "DNA (5'-D(P*TP*G)-3')" 588.441 2 ? ? ? ?
4 non-polymer syn 'BARIUM ION' 137.327 1 ? ? ? ?
5 water nat water 18.015 15 ? ? ? ?
#
loop_
_entity_poly.entity_id
_entity_poly.type
_entity_poly.nstd_linkage
_entity_poly.nstd_monomer
_entity_poly.pdbx_seq_one_letter_code
_entity_poly.pdbx_seq_one_letter_code_can
_entity_poly.pdbx_strand_id
_entity_poly.pdbx_target_identifier
1 polydeoxyribonucleotide no no '(DC)(DA)(DC)(DG)(DC)(DG)' CACGCG A ?
2 polydeoxyribonucleotide no no '(DC)(DG)(DC)(DG)(DT)(DG)' CGCGTG B ?
3 polydeoxyribonucleotide no no '(DT)(DG)' TG C,D ?
#
loop_
_pdbx_entity_nonpoly.entity_id
_pdbx_entity_nonpoly.name
_pdbx_entity_nonpoly.comp_id
4 'BARIUM ION' BA
5 water HOH
#
loop_
_entity_poly_seq.entity_id
_entity_poly_seq.num
_entity_poly_seq.mon_id
_entity_poly_seq.hetero
1 1 DC n
1 2 DA n
1 3 DC n
1 4 DG n
1 5 DC n
1 6 DG n
2 1 DC n
2 2 DG n
2 3 DC n
2 4 DG n
2 5 DT n
2 6 DG n
3 1 DT n
3 2 DG n
#
loop_
_chem_comp.id
_chem_comp.type
_chem_comp.mon_nstd_flag
_chem_comp.name
_chem_comp.pdbx_synonyms
_chem_comp.formula
_chem_comp.formula_weight
BA non-polymer . 'BARIUM ION' ? 'Ba 2' 137.327
DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222
DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197
DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221
DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208
HOH non-polymer . WATER ? 'H2 O' 18.015
#
loop_
_pdbx_poly_seq_scheme.asym_id
_pdbx_poly_seq_scheme.entity_id
_pdbx_poly_seq_scheme.seq_id
_pdbx_poly_seq_scheme.mon_id
_pdbx_poly_seq_scheme.ndb_seq_num
_pdbx_poly_seq_scheme.pdb_seq_num
_pdbx_poly_seq_scheme.auth_seq_num
_pdbx_poly_seq_scheme.pdb_mon_id
_pdbx_poly_seq_scheme.auth_mon_id
_pdbx_poly_seq_scheme.pdb_strand_id
_pdbx_poly_seq_scheme.pdb_ins_code
_pdbx_poly_seq_scheme.hetero
A 1 1 DC 1 1 1 DC DC A . n
A 1 2 DA 2 2 2 DA DA A . n
A 1 3 DC 3 3 3 DC DC A . n
A 1 4 DG 4 4 4 DG DG A . n
A 1 5 DC 5 5 5 DC DC A . n
A 1 6 DG 6 6 6 DG DG A . n
B 2 1 DC 1 7 7 DC DC B . n
B 2 2 DG 2 8 8 DG DG B . n
B 2 3 DC 3 9 9 DC DC B . n
B 2 4 DG 4 10 10 DG DG B . n
B 2 5 DT 5 11 11 DT DT B . n
B 2 6 DG 6 12 12 DG DG B . n
C 3 1 DT 1 13 13 DT DT C . n
C 3 2 DG 2 14 14 DG DG C . n
D 3 1 DT 1 15 15 DT DT D . n
D 3 2 DG 2 16 16 DG DG D . n
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 4 BA 1 101 1 BA BA D .
F 5 HOH 1 101 7 HOH HOH A .
F 5 HOH 2 102 8 HOH HOH A .
F 5 HOH 3 103 9 HOH HOH A .
F 5 HOH 4 104 15 HOH HOH A .
G 5 HOH 1 101 6 HOH HOH B .
G 5 HOH 2 102 10 HOH HOH B .
G 5 HOH 3 103 11 HOH HOH B .
G 5 HOH 4 104 12 HOH HOH B .
G 5 HOH 5 105 13 HOH HOH B .
G 5 HOH 6 106 14 HOH HOH B .
H 5 HOH 1 101 1 HOH HOH C .
H 5 HOH 2 102 5 HOH HOH C .
H 5 HOH 3 103 2 HOH HOH C .
H 5 HOH 4 104 3 HOH HOH C .
I 5 HOH 1 201 4 HOH HOH D .
#
loop_
_software.name
_software.classification
_software.version
_software.citation_id
_software.pdbx_ordinal
MAR345dtb 'data collection' . ? 1
AMoRE phasing . ? 2
REFMAC refinement 5.5.0109 ? 3
AUTOMAR 'data reduction' . ? 4
SCALA 'data scaling' . ? 5
#
_cell.entry_id 4E60
_cell.length_a 35.177
_cell.length_b 35.177
_cell.length_c 44.341
_cell.angle_alpha 90.00
_cell.angle_beta 90.00
_cell.angle_gamma 120.00
_cell.Z_PDB 12
_cell.pdbx_unique_axis ?
_cell.length_a_esd ?
_cell.length_b_esd ?
_cell.length_c_esd ?
_cell.angle_alpha_esd ?
_cell.angle_beta_esd ?
_cell.angle_gamma_esd ?
#
_symmetry.entry_id 4E60
_symmetry.space_group_name_H-M 'P 65'
_symmetry.pdbx_full_space_group_name_H-M ?
_symmetry.cell_setting ?
_symmetry.Int_Tables_number 170
_symmetry.space_group_name_Hall ?
#
_exptl.entry_id 4E60
_exptl.method 'X-ray diffraction'
_exptl.crystals_number 1
#
_exptl_crystal.id 1
_exptl_crystal.density_meas ?
_exptl_crystal.density_Matthews 1.6512
_exptl_crystal.density_percent_sol 25.5074
_exptl_crystal.description ?
_exptl_crystal.F_000 ?
_exptl_crystal.preparation ?
#
_exptl_crystal_grow.crystal_id 1
_exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP'
_exptl_crystal_grow.temp 293
_exptl_crystal_grow.temp_details ?
_exptl_crystal_grow.pH 7.0
_exptl_crystal_grow.pdbx_details
'drop: 1mM DNA, 50mM sodium cacodylate trihydrate buffer (pH 7.0), 1mM barium dichloride dihydrate, 0.5mM spermine, reservoir: 30% 2-methyl-2,4-pentanediol (MPD), VAPOR DIFFUSION, HANGING DROP, temperature 293K'
_exptl_crystal_grow.pdbx_pH_range ?
#
_diffrn.id 1
_diffrn.ambient_temp 100
_diffrn.ambient_temp_details ?
_diffrn.crystal_id 1
#
_diffrn_detector.diffrn_id 1
_diffrn_detector.detector 'Image plate'
_diffrn_detector.type 'MAR scanner 345 mm plate'
_diffrn_detector.pdbx_collection_date 2008-09-08
_diffrn_detector.details mirror
#
_diffrn_radiation.diffrn_id 1
_diffrn_radiation.wavelength_id 1
_diffrn_radiation.pdbx_monochromatic_or_laue_m_l M
_diffrn_radiation.monochromator graphite
_diffrn_radiation.pdbx_diffrn_protocol 'Single wavelength'
_diffrn_radiation.pdbx_scattering_type x-ray
#
_diffrn_radiation_wavelength.id 1
_diffrn_radiation_wavelength.wavelength 1.5418
_diffrn_radiation_wavelength.wt 1.0
#
_diffrn_source.diffrn_id 1
_diffrn_source.source 'Rotating anode'
_diffrn_source.type 'BRUKER AXS MICROSTAR'
_diffrn_source.pdbx_synchrotron_site ?
_diffrn_source.pdbx_synchrotron_beamline ?
_diffrn_source.pdbx_wavelength ?
_diffrn_source.pdbx_wavelength_list 1.5418
#
_reflns.entry_id 4E60
_reflns.observed_criterion_sigma_I ?
_reflns.observed_criterion_sigma_F ?
_reflns.d_resolution_low 30
_reflns.d_resolution_high 1.86
_reflns.number_obs 2650
_reflns.number_all 2655
_reflns.percent_possible_obs 99.8
_reflns.pdbx_Rmerge_I_obs 0.111
_reflns.pdbx_Rsym_value 0.0940
_reflns.pdbx_netI_over_sigmaI 4.6
_reflns.B_iso_Wilson_estimate 25.5
_reflns.pdbx_redundancy 6.49
_reflns.R_free_details ?
_reflns.limit_h_max ?
_reflns.limit_h_min ?
_reflns.limit_k_max ?
_reflns.limit_k_min ?
_reflns.limit_l_max ?
_reflns.limit_l_min ?
_reflns.observed_criterion_F_max ?
_reflns.observed_criterion_F_min ?
_reflns.pdbx_chi_squared ?
_reflns.pdbx_scaling_rejects ?
_reflns.pdbx_ordinal 1
_reflns.pdbx_diffrn_id 1
#
_reflns_shell.d_res_high 1.86
_reflns_shell.d_res_low 1.93
_reflns_shell.percent_possible_all 100
_reflns_shell.Rmerge_I_obs 0.1724
_reflns_shell.pdbx_Rsym_value 0.1698
_reflns_shell.meanI_over_sigI_obs 2.2
_reflns_shell.pdbx_redundancy 6.67
_reflns_shell.percent_possible_obs ?
_reflns_shell.number_unique_all ?
_reflns_shell.number_measured_all ?
_reflns_shell.number_measured_obs ?
_reflns_shell.number_unique_obs ?
_reflns_shell.pdbx_chi_squared ?
_reflns_shell.pdbx_rejects ?
_reflns_shell.pdbx_netI_over_sigmaI_obs ?
_reflns_shell.number_possible ?
_reflns_shell.Rmerge_F_all ?
_reflns_shell.Rmerge_F_obs ?
_reflns_shell.Rmerge_I_all ?
_reflns_shell.meanI_over_sigI_all ?
_reflns_shell.pdbx_Rrim_I_all ?
_reflns_shell.pdbx_Rpim_I_all ?
_reflns_shell.pdbx_ordinal 1
_reflns_shell.pdbx_diffrn_id 1
#
_refine.entry_id 4E60
_refine.ls_number_reflns_obs 2529
_refine.ls_number_reflns_all 2537
_refine.pdbx_ls_sigma_I ?
_refine.pdbx_ls_sigma_F ?
_refine.pdbx_data_cutoff_high_absF ?
_refine.pdbx_data_cutoff_low_absF ?
_refine.pdbx_data_cutoff_high_rms_absF ?
_refine.ls_d_res_low 25.11
_refine.ls_d_res_high 1.86
_refine.ls_percent_reflns_obs 99.66
_refine.ls_R_factor_obs 0.21601
_refine.ls_R_factor_all ?
_refine.ls_R_factor_R_work 0.21524
_refine.ls_R_factor_R_free 0.23147
_refine.ls_R_factor_R_free_error ?
_refine.ls_R_factor_R_free_error_details ?
_refine.ls_percent_reflns_R_free 4.5
_refine.ls_number_reflns_R_free 119
_refine.ls_number_parameters ?
_refine.ls_number_restraints ?
_refine.occupancy_min ?
_refine.occupancy_max ?
_refine.correlation_coeff_Fo_to_Fc 0.936
_refine.correlation_coeff_Fo_to_Fc_free 0.936
_refine.B_iso_mean 13.84
_refine.aniso_B[1][1] 0.0000
_refine.aniso_B[2][2] 0.0000
_refine.aniso_B[3][3] 0.0100
_refine.aniso_B[1][2] 0.0000
_refine.aniso_B[1][3] 0.0000
_refine.aniso_B[2][3] 0.0000
_refine.solvent_model_details ?
_refine.solvent_model_param_ksol ?
_refine.solvent_model_param_bsol ?
_refine.pdbx_solvent_vdw_probe_radii ?
_refine.pdbx_solvent_ion_probe_radii ?
_refine.pdbx_solvent_shrinkage_radii ?
_refine.pdbx_ls_cross_valid_method THROUGHOUT
_refine.details ?
_refine.pdbx_starting_model 'fiber model of Z-type DNA built using the program InsightII'
_refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT'
_refine.pdbx_isotropic_thermal_model ?
_refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD'
_refine.pdbx_stereochem_target_val_spec_case ?
_refine.pdbx_R_Free_selection_details RANDOM
_refine.pdbx_overall_ESU_R_Free 0.034
_refine.overall_SU_ML 0.094
_refine.overall_SU_B 3.2750
_refine.overall_SU_R_Cruickshank_DPI ?
_refine.ls_redundancy_reflns_obs ?
_refine.B_iso_min ?
_refine.B_iso_max ?
_refine.overall_SU_R_free ?
_refine.pdbx_overall_ESU_R ?
_refine.ls_wR_factor_R_free ?
_refine.ls_wR_factor_R_work ?
_refine.overall_FOM_free_R_set ?
_refine.overall_FOM_work_R_set ?
_refine.pdbx_overall_phase_error ?
_refine.pdbx_diffrn_id 1
_refine.pdbx_refine_id 'X-ray diffraction'
_refine.pdbx_TLS_residual_ADP_flag ?
_refine.pdbx_overall_SU_R_free_Cruickshank_DPI ?
_refine.pdbx_overall_SU_R_Blow_DPI ?
_refine.pdbx_overall_SU_R_free_Blow_DPI ?
#
_refine_hist.pdbx_refine_id 'X-ray diffraction'
_refine_hist.cycle_id LAST
_refine_hist.pdbx_number_atoms_protein 0
_refine_hist.pdbx_number_atoms_nucleic_acid 321
_refine_hist.pdbx_number_atoms_ligand 1
_refine_hist.number_atoms_solvent 15
_refine_hist.number_atoms_total 337
_refine_hist.d_res_high 1.86
_refine_hist.d_res_low 25.11
#
loop_
_refine_ls_restr.pdbx_refine_id
_refine_ls_restr.type
_refine_ls_restr.number
_refine_ls_restr.dev_ideal
_refine_ls_restr.dev_ideal_target
_refine_ls_restr.weight
_refine_ls_restr.pdbx_restraint_function
'X-ray diffraction' 'r_bond_refined_d' 357 0.030 0.021 ? ?
'X-ray diffraction' 'r_angle_refined_deg' 544 3.490 3.000 ? ?
'X-ray diffraction' 'r_chiral_restr' 61 0.213 0.200 ? ?
'X-ray diffraction' 'r_gen_planes_refined' 170 0.020 0.020 ? ?
'X-ray diffraction' 'r_scbond_it' 357 3.573 3.000 ? ?
'X-ray diffraction' 'r_scangle_it' 544 4.315 4.500 ? ?
#
_refine_ls_shell.pdbx_refine_id 'X-ray diffraction'
_refine_ls_shell.pdbx_total_number_of_bins_used 20
_refine_ls_shell.d_res_high 1.860
_refine_ls_shell.d_res_low 1.908
_refine_ls_shell.number_reflns_R_work 179
_refine_ls_shell.R_factor_R_work 0.307
_refine_ls_shell.percent_reflns_obs 98.94
_refine_ls_shell.R_factor_R_free 0.332
_refine_ls_shell.R_factor_R_free_error ?
_refine_ls_shell.percent_reflns_R_free ?
_refine_ls_shell.number_reflns_R_free 8
_refine_ls_shell.number_reflns_all ?
_refine_ls_shell.R_factor_all ?
_refine_ls_shell.number_reflns_obs ?
_refine_ls_shell.redundancy_reflns_obs ?
#
_struct.entry_id 4E60
_struct.title 'Interactions of Ba2+ with a non-self-complementary Z-type DNA duplex'
_struct.pdbx_model_details ?
_struct.pdbx_CASP_flag N
_struct.pdbx_model_type_details ?
#
_struct_keywords.entry_id 4E60
_struct_keywords.pdbx_keywords DNA
_struct_keywords.text 'Z-type DNA double helices, Barium ions, DNA'
#
loop_
_struct_asym.id
_struct_asym.pdbx_blank_PDB_chainid_flag
_struct_asym.pdbx_modified
_struct_asym.entity_id
_struct_asym.details
A N N 1 ?
B N N 2 ?
C N N 3 ?
D N N 3 ?
E N N 4 ?
F N N 5 ?
G N N 5 ?
H N N 5 ?
I N N 5 ?
#
loop_
_struct_ref.id
_struct_ref.db_name
_struct_ref.db_code
_struct_ref.pdbx_db_accession
_struct_ref.entity_id
_struct_ref.pdbx_align_begin
_struct_ref.pdbx_seq_one_letter_code
_struct_ref.pdbx_db_isoform
1 PDB 4E60 4E60 1 ? ? ?
2 PDB 4E60 4E60 2 ? ? ?
3 PDB 4E60 4E60 3 ? ? ?
#
loop_
_struct_ref_seq.align_id
_struct_ref_seq.ref_id
_struct_ref_seq.pdbx_PDB_id_code
_struct_ref_seq.pdbx_strand_id
_struct_ref_seq.seq_align_beg
_struct_ref_seq.pdbx_seq_align_beg_ins_code
_struct_ref_seq.seq_align_end
_struct_ref_seq.pdbx_seq_align_end_ins_code
_struct_ref_seq.pdbx_db_accession
_struct_ref_seq.db_align_beg
_struct_ref_seq.pdbx_db_align_beg_ins_code
_struct_ref_seq.db_align_end
_struct_ref_seq.pdbx_db_align_end_ins_code
_struct_ref_seq.pdbx_auth_seq_align_beg
_struct_ref_seq.pdbx_auth_seq_align_end
1 1 4E60 A 1 ? 6 ? 4E60 1 ? 6 ? 1 6
2 2 4E60 B 1 ? 6 ? 4E60 7 ? 12 ? 7 12
3 3 4E60 C 1 ? 2 ? 4E60 13 ? 14 ? 13 14
4 3 4E60 D 1 ? 2 ? 4E60 15 ? 16 ? 15 16
#
loop_
_pdbx_struct_assembly.id
_pdbx_struct_assembly.details
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
1 author_and_software_defined_assembly PISA dimeric 2
2 author_and_software_defined_assembly PISA dimeric 2
#
loop_
_pdbx_struct_assembly_prop.biol_id
_pdbx_struct_assembly_prop.type
_pdbx_struct_assembly_prop.value
_pdbx_struct_assembly_prop.details
1 'ABSA (A^2)' 860 ?
1 MORE -13 ?
1 'SSA (A^2)' 2320 ?
2 'ABSA (A^2)' 230 ?
2 MORE -5 ?
2 'SSA (A^2)' 1070 ?
#
loop_
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
_pdbx_struct_assembly_gen.asym_id_list
1 1 A,B,F,G
2 1 C,D,E,H,I
#
_pdbx_struct_oper_list.id 1
_pdbx_struct_oper_list.type 'identity operation'
_pdbx_struct_oper_list.name 1_555
_pdbx_struct_oper_list.symmetry_operation x,y,z
_pdbx_struct_oper_list.matrix[1][1] 1.0000000000
_pdbx_struct_oper_list.matrix[1][2] 0.0000000000
_pdbx_struct_oper_list.matrix[1][3] 0.0000000000
_pdbx_struct_oper_list.vector[1] 0.0000000000
_pdbx_struct_oper_list.matrix[2][1] 0.0000000000
_pdbx_struct_oper_list.matrix[2][2] 1.0000000000
_pdbx_struct_oper_list.matrix[2][3] 0.0000000000
_pdbx_struct_oper_list.vector[2] 0.0000000000
_pdbx_struct_oper_list.matrix[3][1] 0.0000000000
_pdbx_struct_oper_list.matrix[3][2] 0.0000000000
_pdbx_struct_oper_list.matrix[3][3] 1.0000000000
_pdbx_struct_oper_list.vector[3] 0.0000000000
#
_struct_biol.id 1
_struct_biol.details ?
#
loop_
_struct_conn.id
_struct_conn.conn_type_id
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.pdbx_PDB_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.details
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
_struct_conn.pdbx_role
metalc1 metalc ? ? A DG 4 O6 ? ? ? 1_555 E BA . BA A ? A DG 4 D BA 101 1_555 ? ? ? ? ? ? ? 3.117 ? ?
metalc2 metalc ? ? D DG 2 O6 ? ? ? 1_555 E BA . BA B ? D DG 16 D BA 101 1_555 ? ? ? ? ? ? ? 2.602 ? ?
hydrog1 hydrog ? ? A DC 1 N3 ? ? ? 1_555 B DG 6 N1 ? ? A DC 1 B DG 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog2 hydrog ? ? A DC 1 N4 ? ? ? 1_555 B DG 6 O6 ? ? A DC 1 B DG 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog3 hydrog ? ? A DC 1 O2 ? ? ? 1_555 B DG 6 N2 ? ? A DC 1 B DG 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog4 hydrog ? ? A DA 2 N1 ? ? ? 1_555 B DT 5 N3 ? ? A DA 2 B DT 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog5 hydrog ? ? A DA 2 N6 ? ? ? 1_555 B DT 5 O4 ? ? A DA 2 B DT 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog6 hydrog ? ? A DC 3 N3 ? ? ? 1_555 B DG 4 N1 ? ? A DC 3 B DG 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog7 hydrog ? ? A DC 3 N4 ? ? ? 1_555 B DG 4 O6 ? ? A DC 3 B DG 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog8 hydrog ? ? A DC 3 O2 ? ? ? 1_555 B DG 4 N2 ? ? A DC 3 B DG 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog9 hydrog ? ? A DG 4 N1 ? ? ? 1_555 B DC 3 N3 ? ? A DG 4 B DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog10 hydrog ? ? A DG 4 N2 ? ? ? 1_555 B DC 3 O2 ? ? A DG 4 B DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog11 hydrog ? ? A DG 4 O6 ? ? ? 1_555 B DC 3 N4 ? ? A DG 4 B DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog12 hydrog ? ? A DC 5 N3 ? ? ? 1_555 B DG 2 N1 ? ? A DC 5 B DG 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog13 hydrog ? ? A DC 5 N4 ? ? ? 1_555 B DG 2 O6 ? ? A DC 5 B DG 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog14 hydrog ? ? A DC 5 O2 ? ? ? 1_555 B DG 2 N2 ? ? A DC 5 B DG 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog15 hydrog ? ? A DG 6 N1 ? ? ? 1_555 B DC 1 N3 ? ? A DG 6 B DC 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog16 hydrog ? ? A DG 6 N2 ? ? ? 1_555 B DC 1 O2 ? ? A DG 6 B DC 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog17 hydrog ? ? A DG 6 O6 ? ? ? 1_555 B DC 1 N4 ? ? A DG 6 B DC 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog18 hydrog ? ? C DT 1 N3 ? ? ? 1_555 D DG 2 O6 ? ? C DT 13 D DG 16 1_555 ? ? ? ? ? ? TYPE_27_PAIR ? ? ?
hydrog19 hydrog ? ? C DT 1 O4 ? ? ? 1_555 D DG 2 N1 ? ? C DT 13 D DG 16 1_555 ? ? ? ? ? ? TYPE_27_PAIR ? ? ?
hydrog20 hydrog ? ? C DG 2 N2 ? ? ? 1_555 D DT 1 O2 ? ? C DG 14 D DT 15 1_555 ? ? ? ? ? ? 'DG-DT MISPAIR' ? ? ?
#
loop_
_struct_conn_type.id
_struct_conn_type.criteria
_struct_conn_type.reference
metalc ? ?
hydrog ? ?
#
_struct_site.id AC1
_struct_site.pdbx_evidence_code Software
_struct_site.pdbx_auth_asym_id D
_struct_site.pdbx_auth_comp_id BA
_struct_site.pdbx_auth_seq_id 101
_struct_site.pdbx_auth_ins_code ?
_struct_site.pdbx_num_residues 2
_struct_site.details 'BINDING SITE FOR RESIDUE BA D 101'
#
loop_
_struct_site_gen.id
_struct_site_gen.site_id
_struct_site_gen.pdbx_num_res
_struct_site_gen.label_comp_id
_struct_site_gen.label_asym_id
_struct_site_gen.label_seq_id
_struct_site_gen.pdbx_auth_ins_code
_struct_site_gen.auth_comp_id
_struct_site_gen.auth_asym_id
_struct_site_gen.auth_seq_id
_struct_site_gen.label_atom_id
_struct_site_gen.label_alt_id
_struct_site_gen.symmetry
_struct_site_gen.details
1 AC1 2 DG A 4 ? DG A 4 . ? 1_555 ?
2 AC1 2 DG D 2 ? DG D 16 . ? 1_555 ?
#
loop_
_pdbx_validate_rmsd_bond.id
_pdbx_validate_rmsd_bond.PDB_model_num
_pdbx_validate_rmsd_bond.auth_atom_id_1
_pdbx_validate_rmsd_bond.auth_asym_id_1
_pdbx_validate_rmsd_bond.auth_comp_id_1
_pdbx_validate_rmsd_bond.auth_seq_id_1
_pdbx_validate_rmsd_bond.PDB_ins_code_1
_pdbx_validate_rmsd_bond.label_alt_id_1
_pdbx_validate_rmsd_bond.auth_atom_id_2
_pdbx_validate_rmsd_bond.auth_asym_id_2
_pdbx_validate_rmsd_bond.auth_comp_id_2
_pdbx_validate_rmsd_bond.auth_seq_id_2
_pdbx_validate_rmsd_bond.PDB_ins_code_2
_pdbx_validate_rmsd_bond.label_alt_id_2
_pdbx_validate_rmsd_bond.bond_value
_pdbx_validate_rmsd_bond.bond_target_value
_pdbx_validate_rmsd_bond.bond_deviation
_pdbx_validate_rmsd_bond.bond_standard_deviation
_pdbx_validate_rmsd_bond.linker_flag
1 1 P A DA 2 ? ? "O5'" A DA 2 ? ? 1.515 1.593 -0.078 0.010 N
2 1 C5 A DA 2 ? ? N7 A DA 2 ? ? 1.344 1.388 -0.044 0.006 N
3 1 P A DC 3 ? ? "O5'" A DC 3 ? ? 1.663 1.593 0.070 0.010 N
4 1 C5 A DC 3 ? ? C6 A DC 3 ? ? 1.389 1.339 0.050 0.008 N
5 1 P A DG 4 ? ? "O5'" A DG 4 ? ? 1.660 1.593 0.067 0.010 N
6 1 "O3'" A DG 4 ? ? "C3'" A DG 4 ? ? 1.369 1.419 -0.050 0.006 N
7 1 N1 A DG 4 ? ? C2 A DG 4 ? ? 1.425 1.373 0.052 0.008 N
8 1 "O3'" A DC 5 ? ? P A DG 6 ? ? 1.527 1.607 -0.080 0.012 Y
9 1 N1 B DC 7 ? ? C6 B DC 7 ? ? 1.329 1.367 -0.038 0.006 N
10 1 "O3'" B DG 8 ? ? "C3'" B DG 8 ? ? 1.358 1.419 -0.061 0.006 N
11 1 N9 B DG 8 ? ? C4 B DG 8 ? ? 1.435 1.375 0.060 0.008 N
12 1 P B DC 9 ? ? OP1 B DC 9 ? ? 1.261 1.485 -0.224 0.017 N
13 1 P B DC 9 ? ? "O5'" B DC 9 ? ? 1.657 1.593 0.064 0.010 N
14 1 "O3'" B DC 9 ? ? "C3'" B DC 9 ? ? 1.516 1.435 0.081 0.013 N
15 1 "O4'" B DG 10 ? ? "C4'" B DG 10 ? ? 1.507 1.449 0.058 0.009 N
16 1 "O3'" B DG 10 ? ? "C3'" B DG 10 ? ? 1.381 1.419 -0.038 0.006 N
17 1 N7 B DG 10 ? ? C8 B DG 10 ? ? 1.256 1.305 -0.049 0.006 N
18 1 N7 B DG 12 ? ? C8 B DG 12 ? ? 1.261 1.305 -0.044 0.006 N
19 1 P C DT 13 ? ? "O5'" C DT 13 ? ? 1.523 1.593 -0.070 0.010 N
20 1 "O3'" C DG 14 ? ? "C3'" C DG 14 ? ? 1.353 1.419 -0.066 0.006 N
21 1 N3 C DG 14 ? ? C4 C DG 14 ? ? 1.394 1.350 0.044 0.007 N
22 1 C5 C DG 14 ? ? N7 C DG 14 ? ? 1.350 1.388 -0.038 0.006 N
23 1 "O5'" D DT 15 ? ? "C5'" D DT 15 ? ? 1.558 1.440 0.118 0.016 N
24 1 "O3'" D DT 15 ? ? "C3'" D DT 15 ? ? 1.361 1.419 -0.058 0.006 N
25 1 C2 D DT 15 ? ? N3 D DT 15 ? ? 1.303 1.373 -0.070 0.008 N
26 1 C5 D DG 16 ? ? N7 D DG 16 ? ? 1.326 1.388 -0.062 0.006 N
#
loop_
_pdbx_validate_rmsd_angle.id
_pdbx_validate_rmsd_angle.PDB_model_num
_pdbx_validate_rmsd_angle.auth_atom_id_1
_pdbx_validate_rmsd_angle.auth_asym_id_1
_pdbx_validate_rmsd_angle.auth_comp_id_1
_pdbx_validate_rmsd_angle.auth_seq_id_1
_pdbx_validate_rmsd_angle.PDB_ins_code_1
_pdbx_validate_rmsd_angle.label_alt_id_1
_pdbx_validate_rmsd_angle.auth_atom_id_2
_pdbx_validate_rmsd_angle.auth_asym_id_2
_pdbx_validate_rmsd_angle.auth_comp_id_2
_pdbx_validate_rmsd_angle.auth_seq_id_2
_pdbx_validate_rmsd_angle.PDB_ins_code_2
_pdbx_validate_rmsd_angle.label_alt_id_2
_pdbx_validate_rmsd_angle.auth_atom_id_3
_pdbx_validate_rmsd_angle.auth_asym_id_3
_pdbx_validate_rmsd_angle.auth_comp_id_3
_pdbx_validate_rmsd_angle.auth_seq_id_3
_pdbx_validate_rmsd_angle.PDB_ins_code_3
_pdbx_validate_rmsd_angle.label_alt_id_3
_pdbx_validate_rmsd_angle.angle_value
_pdbx_validate_rmsd_angle.angle_target_value
_pdbx_validate_rmsd_angle.angle_deviation
_pdbx_validate_rmsd_angle.angle_standard_deviation
_pdbx_validate_rmsd_angle.linker_flag
1 1 "O4'" A DC 1 ? ? "C1'" A DC 1 ? ? N1 A DC 1 ? ? 110.65 108.30 2.35 0.30 N
2 1 "O3'" A DA 2 ? ? P A DC 3 ? ? "O5'" A DC 3 ? ? 92.36 104.00 -11.64 1.90 Y
3 1 "O5'" A DC 3 ? ? P A DC 3 ? ? OP2 A DC 3 ? ? 120.61 110.70 9.91 1.20 N
4 1 "O4'" A DC 3 ? ? "C4'" A DC 3 ? ? "C3'" A DC 3 ? ? 101.82 104.50 -2.68 0.40 N
5 1 "C3'" A DC 3 ? ? "C2'" A DC 3 ? ? "C1'" A DC 3 ? ? 97.28 102.40 -5.12 0.80 N
6 1 C6 A DC 3 ? ? N1 A DC 3 ? ? C2 A DC 3 ? ? 116.22 120.30 -4.08 0.40 N
7 1 C2 A DC 3 ? ? N3 A DC 3 ? ? C4 A DC 3 ? ? 125.12 119.90 5.22 0.50 N
8 1 N3 A DC 3 ? ? C4 A DC 3 ? ? C5 A DC 3 ? ? 116.89 121.90 -5.01 0.40 N
9 1 N1 A DC 3 ? ? C2 A DC 3 ? ? O2 A DC 3 ? ? 124.57 118.90 5.67 0.60 N
10 1 N3 A DC 3 ? ? C2 A DC 3 ? ? O2 A DC 3 ? ? 116.51 121.90 -5.39 0.70 N
11 1 C2 A DC 3 ? ? N1 A DC 3 ? ? "C1'" A DC 3 ? ? 126.06 118.80 7.26 1.10 N
12 1 "O4'" A DG 4 ? ? "C1'" A DG 4 ? ? N9 A DG 4 ? ? 118.35 108.30 10.05 0.30 N
13 1 C5 A DG 4 ? ? N7 A DG 4 ? ? C8 A DG 4 ? ? 99.52 104.30 -4.78 0.50 N
14 1 N7 A DG 4 ? ? C8 A DG 4 ? ? N9 A DG 4 ? ? 118.09 113.10 4.99 0.50 N
15 1 C8 A DG 4 ? ? N9 A DG 4 ? ? C4 A DG 4 ? ? 102.32 106.40 -4.08 0.40 N
16 1 C6 A DG 4 ? ? C5 A DG 4 ? ? N7 A DG 4 ? ? 126.50 130.40 -3.90 0.60 N
17 1 N3 A DG 4 ? ? C2 A DG 4 ? ? N2 A DG 4 ? ? 114.41 119.90 -5.49 0.70 N
18 1 N1 A DG 4 ? ? C6 A DG 4 ? ? O6 A DG 4 ? ? 125.09 119.90 5.19 0.60 N
19 1 C5 A DG 4 ? ? C6 A DG 4 ? ? O6 A DG 4 ? ? 121.98 128.60 -6.62 0.60 N
20 1 "O5'" A DC 5 ? ? P A DC 5 ? ? OP1 A DC 5 ? ? 99.22 105.70 -6.48 0.90 N
21 1 "O4'" A DC 5 ? ? "C4'" A DC 5 ? ? "C3'" A DC 5 ? ? 109.98 106.00 3.98 0.60 N
22 1 "O4'" A DC 5 ? ? "C1'" A DC 5 ? ? N1 A DC 5 ? ? 113.27 108.30 4.97 0.30 N
23 1 "C5'" A DG 6 ? ? "C4'" A DG 6 ? ? "O4'" A DG 6 ? ? 96.65 109.30 -12.65 1.90 N
24 1 N1 A DG 6 ? ? C2 A DG 6 ? ? N2 A DG 6 ? ? 122.07 116.20 5.87 0.90 N
25 1 "O5'" B DG 8 ? ? "C5'" B DG 8 ? ? "C4'" B DG 8 ? ? 102.53 109.40 -6.87 0.80 N
26 1 "C5'" B DG 8 ? ? "C4'" B DG 8 ? ? "C3'" B DG 8 ? ? 96.75 114.10 -17.35 1.80 N
27 1 C2 B DG 8 ? ? N3 B DG 8 ? ? C4 B DG 8 ? ? 115.89 111.90 3.99 0.50 N
28 1 N3 B DG 8 ? ? C4 B DG 8 ? ? C5 B DG 8 ? ? 125.08 128.60 -3.52 0.50 N
29 1 C5 B DG 8 ? ? N7 B DG 8 ? ? C8 B DG 8 ? ? 109.83 104.30 5.53 0.50 N
30 1 N7 B DG 8 ? ? C8 B DG 8 ? ? N9 B DG 8 ? ? 109.39 113.10 -3.71 0.50 N
31 1 N3 B DG 8 ? ? C4 B DG 8 ? ? N9 B DG 8 ? ? 130.47 126.00 4.47 0.60 N
32 1 "O5'" B DC 9 ? ? P B DC 9 ? ? OP2 B DC 9 ? ? 118.53 110.70 7.83 1.20 N
33 1 C6 B DC 9 ? ? N1 B DC 9 ? ? C2 B DC 9 ? ? 123.43 120.30 3.13 0.40 N
34 1 N3 B DC 9 ? ? C4 B DC 9 ? ? C5 B DC 9 ? ? 124.76 121.90 2.86 0.40 N
35 1 C4 B DC 9 ? ? C5 B DC 9 ? ? C6 B DC 9 ? ? 114.23 117.40 -3.17 0.50 N
36 1 "O5'" B DG 10 ? ? P B DG 10 ? ? OP2 B DG 10 ? ? 118.29 110.70 7.59 1.20 N
37 1 C6 B DG 10 ? ? N1 B DG 10 ? ? C2 B DG 10 ? ? 129.07 125.10 3.97 0.60 N
38 1 P B DT 11 ? ? "O5'" B DT 11 ? ? "C5'" B DT 11 ? ? 111.15 120.90 -9.75 1.60 N
39 1 "O4'" B DT 11 ? ? "C4'" B DT 11 ? ? "C3'" B DT 11 ? ? 110.37 106.00 4.37 0.60 N
40 1 "O5'" B DG 12 ? ? P B DG 12 ? ? OP1 B DG 12 ? ? 94.74 105.70 -10.96 0.90 N
41 1 "O5'" B DG 12 ? ? "C5'" B DG 12 ? ? "C4'" B DG 12 ? ? 103.40 109.40 -6.00 0.80 N
42 1 "O4'" B DG 12 ? ? "C1'" B DG 12 ? ? N9 B DG 12 ? ? 116.86 108.30 8.56 0.30 N
43 1 C2 B DG 12 ? ? N3 B DG 12 ? ? C4 B DG 12 ? ? 117.27 111.90 5.37 0.50 N
44 1 N1 B DG 12 ? ? C2 B DG 12 ? ? N2 B DG 12 ? ? 121.71 116.20 5.51 0.90 N
45 1 C2 C DT 13 ? ? N3 C DT 13 ? ? C4 C DT 13 ? ? 122.98 127.20 -4.22 0.60 N
46 1 N3 C DT 13 ? ? C4 C DT 13 ? ? C5 C DT 13 ? ? 118.99 115.20 3.79 0.60 N
47 1 C4 C DT 13 ? ? C5 C DT 13 ? ? C7 C DT 13 ? ? 123.44 119.00 4.44 0.60 N
48 1 C6 C DT 13 ? ? C5 C DT 13 ? ? C7 C DT 13 ? ? 118.91 122.90 -3.99 0.60 N
49 1 C4 C DG 14 ? ? C5 C DG 14 ? ? N7 C DG 14 ? ? 114.44 110.80 3.64 0.40 N
50 1 C4 D DT 15 ? ? C5 D DT 15 ? ? C7 D DT 15 ? ? 122.67 119.00 3.67 0.60 N
51 1 "C3'" D DT 15 ? ? "O3'" D DT 15 ? ? P D DG 16 ? ? 127.11 119.70 7.41 1.20 Y
52 1 N3 D DG 16 ? ? C4 D DG 16 ? ? C5 D DG 16 ? ? 123.43 128.60 -5.17 0.50 N
53 1 C4 D DG 16 ? ? C5 D DG 16 ? ? C6 D DG 16 ? ? 122.48 118.80 3.68 0.60 N
54 1 C4 D DG 16 ? ? C5 D DG 16 ? ? N7 D DG 16 ? ? 108.30 110.80 -2.50 0.40 N
55 1 C5 D DG 16 ? ? N7 D DG 16 ? ? C8 D DG 16 ? ? 109.01 104.30 4.71 0.50 N
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_ordinal
BA BA BA N N 1
DA OP3 O N N 2
DA P P N N 3
DA OP1 O N N 4
DA OP2 O N N 5
DA "O5'" O N N 6
DA "C5'" C N N 7
DA "C4'" C N R 8
DA "O4'" O N N 9
DA "C3'" C N S 10
DA "O3'" O N N 11
DA "C2'" C N N 12
DA "C1'" C N R 13
DA N9 N Y N 14
DA C8 C Y N 15
DA N7 N Y N 16
DA C5 C Y N 17
DA C6 C Y N 18
DA N6 N N N 19
DA N1 N Y N 20
DA C2 C Y N 21
DA N3 N Y N 22
DA C4 C Y N 23
DA HOP3 H N N 24
DA HOP2 H N N 25
DA "H5'" H N N 26
DA "H5''" H N N 27
DA "H4'" H N N 28
DA "H3'" H N N 29
DA "HO3'" H N N 30
DA "H2'" H N N 31
DA "H2''" H N N 32
DA "H1'" H N N 33
DA H8 H N N 34
DA H61 H N N 35
DA H62 H N N 36
DA H2 H N N 37
DC OP3 O N N 38
DC P P N N 39
DC OP1 O N N 40
DC OP2 O N N 41
DC "O5'" O N N 42
DC "C5'" C N N 43
DC "C4'" C N R 44
DC "O4'" O N N 45
DC "C3'" C N S 46
DC "O3'" O N N 47
DC "C2'" C N N 48
DC "C1'" C N R 49
DC N1 N N N 50
DC C2 C N N 51
DC O2 O N N 52
DC N3 N N N 53
DC C4 C N N 54
DC N4 N N N 55
DC C5 C N N 56
DC C6 C N N 57
DC HOP3 H N N 58
DC HOP2 H N N 59
DC "H5'" H N N 60
DC "H5''" H N N 61
DC "H4'" H N N 62
DC "H3'" H N N 63
DC "HO3'" H N N 64
DC "H2'" H N N 65
DC "H2''" H N N 66
DC "H1'" H N N 67
DC H41 H N N 68
DC H42 H N N 69
DC H5 H N N 70
DC H6 H N N 71
DG OP3 O N N 72
DG P P N N 73
DG OP1 O N N 74
DG OP2 O N N 75
DG "O5'" O N N 76
DG "C5'" C N N 77
DG "C4'" C N R 78
DG "O4'" O N N 79
DG "C3'" C N S 80
DG "O3'" O N N 81
DG "C2'" C N N 82
DG "C1'" C N R 83
DG N9 N Y N 84
DG C8 C Y N 85
DG N7 N Y N 86
DG C5 C Y N 87
DG C6 C N N 88
DG O6 O N N 89
DG N1 N N N 90
DG C2 C N N 91
DG N2 N N N 92
DG N3 N N N 93
DG C4 C Y N 94
DG HOP3 H N N 95
DG HOP2 H N N 96
DG "H5'" H N N 97
DG "H5''" H N N 98
DG "H4'" H N N 99
DG "H3'" H N N 100
DG "HO3'" H N N 101
DG "H2'" H N N 102
DG "H2''" H N N 103
DG "H1'" H N N 104
DG H8 H N N 105
DG H1 H N N 106
DG H21 H N N 107
DG H22 H N N 108
DT OP3 O N N 109
DT P P N N 110
DT OP1 O N N 111
DT OP2 O N N 112
DT "O5'" O N N 113
DT "C5'" C N N 114
DT "C4'" C N R 115
DT "O4'" O N N 116
DT "C3'" C N S 117
DT "O3'" O N N 118
DT "C2'" C N N 119
DT "C1'" C N R 120
DT N1 N N N 121
DT C2 C N N 122
DT O2 O N N 123
DT N3 N N N 124
DT C4 C N N 125
DT O4 O N N 126
DT C5 C N N 127
DT C7 C N N 128
DT C6 C N N 129
DT HOP3 H N N 130
DT HOP2 H N N 131
DT "H5'" H N N 132
DT "H5''" H N N 133
DT "H4'" H N N 134
DT "H3'" H N N 135
DT "HO3'" H N N 136
DT "H2'" H N N 137
DT "H2''" H N N 138
DT "H1'" H N N 139
DT H3 H N N 140
DT H71 H N N 141
DT H72 H N N 142
DT H73 H N N 143
DT H6 H N N 144
HOH O O N N 145
HOH H1 H N N 146
HOH H2 H N N 147
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
DA OP3 P SING N N 1
DA OP3 HOP3 SING N N 2
DA P OP1 DOUB N N 3
DA P OP2 SING N N 4
DA P "O5'" SING N N 5
DA OP2 HOP2 SING N N 6
DA "O5'" "C5'" SING N N 7
DA "C5'" "C4'" SING N N 8
DA "C5'" "H5'" SING N N 9
DA "C5'" "H5''" SING N N 10
DA "C4'" "O4'" SING N N 11
DA "C4'" "C3'" SING N N 12
DA "C4'" "H4'" SING N N 13
DA "O4'" "C1'" SING N N 14
DA "C3'" "O3'" SING N N 15
DA "C3'" "C2'" SING N N 16
DA "C3'" "H3'" SING N N 17
DA "O3'" "HO3'" SING N N 18
DA "C2'" "C1'" SING N N 19
DA "C2'" "H2'" SING N N 20
DA "C2'" "H2''" SING N N 21
DA "C1'" N9 SING N N 22
DA "C1'" "H1'" SING N N 23
DA N9 C8 SING Y N 24
DA N9 C4 SING Y N 25
DA C8 N7 DOUB Y N 26
DA C8 H8 SING N N 27
DA N7 C5 SING Y N 28
DA C5 C6 SING Y N 29
DA C5 C4 DOUB Y N 30
DA C6 N6 SING N N 31
DA C6 N1 DOUB Y N 32
DA N6 H61 SING N N 33
DA N6 H62 SING N N 34
DA N1 C2 SING Y N 35
DA C2 N3 DOUB Y N 36
DA C2 H2 SING N N 37
DA N3 C4 SING Y N 38
DC OP3 P SING N N 1
DC OP3 HOP3 SING N N 2
DC P OP1 DOUB N N 3
DC P OP2 SING N N 4
DC P "O5'" SING N N 5
DC OP2 HOP2 SING N N 6
DC "O5'" "C5'" SING N N 7
DC "C5'" "C4'" SING N N 8
DC "C5'" "H5'" SING N N 9
DC "C5'" "H5''" SING N N 10
DC "C4'" "O4'" SING N N 11
DC "C4'" "C3'" SING N N 12
DC "C4'" "H4'" SING N N 13
DC "O4'" "C1'" SING N N 14
DC "C3'" "O3'" SING N N 15
DC "C3'" "C2'" SING N N 16
DC "C3'" "H3'" SING N N 17
DC "O3'" "HO3'" SING N N 18
DC "C2'" "C1'" SING N N 19
DC "C2'" "H2'" SING N N 20
DC "C2'" "H2''" SING N N 21
DC "C1'" N1 SING N N 22
DC "C1'" "H1'" SING N N 23
DC N1 C2 SING N N 24
DC N1 C6 SING N N 25
DC C2 O2 DOUB N N 26
DC C2 N3 SING N N 27
DC N3 C4 DOUB N N 28
DC C4 N4 SING N N 29
DC C4 C5 SING N N 30
DC N4 H41 SING N N 31
DC N4 H42 SING N N 32
DC C5 C6 DOUB N N 33
DC C5 H5 SING N N 34
DC C6 H6 SING N N 35
DG OP3 P SING N N 1
DG OP3 HOP3 SING N N 2
DG P OP1 DOUB N N 3
DG P OP2 SING N N 4
DG P "O5'" SING N N 5
DG OP2 HOP2 SING N N 6
DG "O5'" "C5'" SING N N 7
DG "C5'" "C4'" SING N N 8
DG "C5'" "H5'" SING N N 9
DG "C5'" "H5''" SING N N 10
DG "C4'" "O4'" SING N N 11
DG "C4'" "C3'" SING N N 12
DG "C4'" "H4'" SING N N 13
DG "O4'" "C1'" SING N N 14
DG "C3'" "O3'" SING N N 15
DG "C3'" "C2'" SING N N 16
DG "C3'" "H3'" SING N N 17
DG "O3'" "HO3'" SING N N 18
DG "C2'" "C1'" SING N N 19
DG "C2'" "H2'" SING N N 20
DG "C2'" "H2''" SING N N 21
DG "C1'" N9 SING N N 22
DG "C1'" "H1'" SING N N 23
DG N9 C8 SING Y N 24
DG N9 C4 SING Y N 25
DG C8 N7 DOUB Y N 26
DG C8 H8 SING N N 27
DG N7 C5 SING Y N 28
DG C5 C6 SING N N 29
DG C5 C4 DOUB Y N 30
DG C6 O6 DOUB N N 31
DG C6 N1 SING N N 32
DG N1 C2 SING N N 33
DG N1 H1 SING N N 34
DG C2 N2 SING N N 35
DG C2 N3 DOUB N N 36
DG N2 H21 SING N N 37
DG N2 H22 SING N N 38
DG N3 C4 SING N N 39
DT OP3 P SING N N 1
DT OP3 HOP3 SING N N 2
DT P OP1 DOUB N N 3
DT P OP2 SING N N 4
DT P "O5'" SING N N 5
DT OP2 HOP2 SING N N 6
DT "O5'" "C5'" SING N N 7
DT "C5'" "C4'" SING N N 8
DT "C5'" "H5'" SING N N 9
DT "C5'" "H5''" SING N N 10
DT "C4'" "O4'" SING N N 11
DT "C4'" "C3'" SING N N 12
DT "C4'" "H4'" SING N N 13
DT "O4'" "C1'" SING N N 14
DT "C3'" "O3'" SING N N 15
DT "C3'" "C2'" SING N N 16
DT "C3'" "H3'" SING N N 17
DT "O3'" "HO3'" SING N N 18
DT "C2'" "C1'" SING N N 19
DT "C2'" "H2'" SING N N 20
DT "C2'" "H2''" SING N N 21
DT "C1'" N1 SING N N 22
DT "C1'" "H1'" SING N N 23
DT N1 C2 SING N N 24
DT N1 C6 SING N N 25
DT C2 O2 DOUB N N 26
DT C2 N3 SING N N 27
DT N3 C4 SING N N 28
DT N3 H3 SING N N 29
DT C4 O4 DOUB N N 30
DT C4 C5 SING N N 31
DT C5 C7 SING N N 32
DT C5 C6 DOUB N N 33
DT C7 H71 SING N N 34
DT C7 H72 SING N N 35
DT C7 H73 SING N N 36
DT C6 H6 SING N N 37
HOH O H1 SING N N 1
HOH O H2 SING N N 2
#
_ndb_struct_conf_na.entry_id 4E60
_ndb_struct_conf_na.feature 'z-form double helix'
#
loop_
_ndb_struct_na_base_pair.model_number
_ndb_struct_na_base_pair.i_label_asym_id
_ndb_struct_na_base_pair.i_label_comp_id
_ndb_struct_na_base_pair.i_label_seq_id
_ndb_struct_na_base_pair.i_symmetry
_ndb_struct_na_base_pair.j_label_asym_id
_ndb_struct_na_base_pair.j_label_comp_id
_ndb_struct_na_base_pair.j_label_seq_id
_ndb_struct_na_base_pair.j_symmetry
_ndb_struct_na_base_pair.shear
_ndb_struct_na_base_pair.stretch
_ndb_struct_na_base_pair.stagger
_ndb_struct_na_base_pair.buckle
_ndb_struct_na_base_pair.propeller
_ndb_struct_na_base_pair.opening
_ndb_struct_na_base_pair.pair_number
_ndb_struct_na_base_pair.pair_name
_ndb_struct_na_base_pair.i_auth_asym_id
_ndb_struct_na_base_pair.i_auth_seq_id
_ndb_struct_na_base_pair.i_PDB_ins_code
_ndb_struct_na_base_pair.j_auth_asym_id
_ndb_struct_na_base_pair.j_auth_seq_id
_ndb_struct_na_base_pair.j_PDB_ins_code
_ndb_struct_na_base_pair.hbond_type_28
_ndb_struct_na_base_pair.hbond_type_12
1 A DC 1 1_555 B DG 6 1_555 -0.227 -0.084 -0.115 9.395 2.450 -3.080 1 A_DC1:DG12_B A 1 ? B 12 ? 19 1
1 A DA 2 1_555 B DT 5 1_555 0.843 -0.402 0.709 2.900 1.481 -1.092 2 A_DA2:DT11_B A 2 ? B 11 ? 20 1
1 A DC 3 1_555 B DG 4 1_555 -0.314 -0.131 0.272 -0.113 -0.175 -1.345 3 A_DC3:DG10_B A 3 ? B 10 ? 19 1
1 A DG 4 1_555 B DC 3 1_555 0.797 -0.293 0.737 5.753 -1.452 -1.275 4 A_DG4:DC9_B A 4 ? B 9 ? 19 1
1 A DC 5 1_555 B DG 2 1_555 -0.577 0.103 0.339 -0.109 2.187 -0.301 5 A_DC5:DG8_B A 5 ? B 8 ? 19 1
1 A DG 6 1_555 B DC 1 1_555 1.106 -0.264 0.493 3.543 7.875 2.497 6 A_DG6:DC7_B A 6 ? B 7 ? 19 1
1 C DT 1 1_555 D DG 2 1_555 0.190 -0.341 -0.307 13.964 -3.034 8.554 7 C_DT13:DG16_D C 13 ? D 16 ? 27 1
1 C DG 2 1_555 D DT 1 1_555 0.067 -0.097 0.444 -5.252 0.652 3.946 8 C_DG14:DT15_D C 14 ? D 15 ? ? ?
#
loop_
_ndb_struct_na_base_pair_step.model_number
_ndb_struct_na_base_pair_step.i_label_asym_id_1
_ndb_struct_na_base_pair_step.i_label_comp_id_1
_ndb_struct_na_base_pair_step.i_label_seq_id_1
_ndb_struct_na_base_pair_step.i_symmetry_1
_ndb_struct_na_base_pair_step.j_label_asym_id_1
_ndb_struct_na_base_pair_step.j_label_comp_id_1
_ndb_struct_na_base_pair_step.j_label_seq_id_1
_ndb_struct_na_base_pair_step.j_symmetry_1
_ndb_struct_na_base_pair_step.i_label_asym_id_2
_ndb_struct_na_base_pair_step.i_label_comp_id_2
_ndb_struct_na_base_pair_step.i_label_seq_id_2
_ndb_struct_na_base_pair_step.i_symmetry_2
_ndb_struct_na_base_pair_step.j_label_asym_id_2
_ndb_struct_na_base_pair_step.j_label_comp_id_2
_ndb_struct_na_base_pair_step.j_label_seq_id_2
_ndb_struct_na_base_pair_step.j_symmetry_2
_ndb_struct_na_base_pair_step.shift
_ndb_struct_na_base_pair_step.slide
_ndb_struct_na_base_pair_step.rise
_ndb_struct_na_base_pair_step.tilt
_ndb_struct_na_base_pair_step.roll
_ndb_struct_na_base_pair_step.twist
_ndb_struct_na_base_pair_step.x_displacement
_ndb_struct_na_base_pair_step.y_displacement
_ndb_struct_na_base_pair_step.helical_rise
_ndb_struct_na_base_pair_step.inclination
_ndb_struct_na_base_pair_step.tip
_ndb_struct_na_base_pair_step.helical_twist
_ndb_struct_na_base_pair_step.step_number
_ndb_struct_na_base_pair_step.step_name
_ndb_struct_na_base_pair_step.i_auth_asym_id_1
_ndb_struct_na_base_pair_step.i_auth_seq_id_1
_ndb_struct_na_base_pair_step.i_PDB_ins_code_1
_ndb_struct_na_base_pair_step.j_auth_asym_id_1
_ndb_struct_na_base_pair_step.j_auth_seq_id_1
_ndb_struct_na_base_pair_step.j_PDB_ins_code_1
_ndb_struct_na_base_pair_step.i_auth_asym_id_2
_ndb_struct_na_base_pair_step.i_auth_seq_id_2
_ndb_struct_na_base_pair_step.i_PDB_ins_code_2
_ndb_struct_na_base_pair_step.j_auth_asym_id_2
_ndb_struct_na_base_pair_step.j_auth_seq_id_2
_ndb_struct_na_base_pair_step.j_PDB_ins_code_2
1 A DC 1 1_555 B DG 6 1_555 A DA 2 1_555 B DT 5 1_555 -0.162 5.203 3.730 -5.381 -1.054 -6.027 -32.931 -19.981 3.327 8.140 -41.542 -8.146 1 AA_DC1DA2:DT11DG12_BB A 1 ? B 12 ? A 2 ? B 11 ?
1 A DA 2 1_555 B DT 5 1_555 A DC 3 1_555 B DG 4 1_555 -0.021 -0.837 3.596 2.992 0.393 -54.608 0.885 0.175 3.598 -0.429 3.259 -54.685 2 AA_DA2DC3:DG10DT11_BB A 2 ? B 11 ? A 3 ? B 10 ?
1 A DC 3 1_555 B DG 4 1_555 A DG 4 1_555 B DC 3 1_555 -0.303 5.128 3.545 -1.668 2.091 -3.601 -78.371 -14.118 0.344 -28.621 -22.835 -4.485 3 AA_DC3DG4:DC9DG10_BB A 3 ? B 10 ? A 4 ? B 9 ?
1 A DG 4 1_555 B DC 3 1_555 A DC 5 1_555 B DG 2 1_555 -0.360 -0.989 3.312 4.787 -11.896 -54.585 1.729 -0.112 3.071 12.774 5.140 -55.958 4 AA_DG4DC5:DG8DC9_BB A 4 ? B 9 ? A 5 ? B 8 ?
1 A DC 5 1_555 B DG 2 1_555 A DG 6 1_555 B DC 1 1_555 0.208 5.391 3.612 1.188 4.579 -5.179 -52.431 3.875 -0.884 -41.073 10.658 -7.014 5 AA_DC5DG6:DC7DG8_BB A 5 ? B 8 ? A 6 ? B 7 ?
1 C DT 1 1_555 D DG 2 1_555 C DG 2 1_555 D DT 1 1_555 -0.414 5.355 3.818 -2.049 -7.566 -8.133 -7.306 -7.498 6.260 42.481 -11.506 -11.291 6 CC_DT13DG14:DT15DG16_DD C 13 ? D 16 ? C 14 ? D 15 ?
#
_pdbx_initial_refinement_model.accession_code ?
_pdbx_initial_refinement_model.id 1
_pdbx_initial_refinement_model.entity_id_list ?
_pdbx_initial_refinement_model.type 'in silico model'
_pdbx_initial_refinement_model.source_name InsightII
_pdbx_initial_refinement_model.details 'fiber model of Z-type DNA built using the program InsightII'
#
_atom_sites.entry_id 4E60
_atom_sites.fract_transf_matrix[1][1] 0.028428
_atom_sites.fract_transf_matrix[1][2] 0.016413
_atom_sites.fract_transf_matrix[1][3] 0.000000
_atom_sites.fract_transf_matrix[2][1] 0.000000
_atom_sites.fract_transf_matrix[2][2] 0.032825
_atom_sites.fract_transf_matrix[2][3] 0.000000
_atom_sites.fract_transf_matrix[3][1] 0.000000
_atom_sites.fract_transf_matrix[3][2] 0.000000
_atom_sites.fract_transf_matrix[3][3] 0.022552
_atom_sites.fract_transf_vector[1] 0.00000
_atom_sites.fract_transf_vector[2] 0.00000
_atom_sites.fract_transf_vector[3] 0.00000
#
loop_
_atom_type.symbol
BA
C
N
O
P
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_alt_id
_atom_site.label_comp_id
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.label_seq_id
_atom_site.pdbx_PDB_ins_code
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_seq_id
_atom_site.auth_comp_id
_atom_site.auth_asym_id
_atom_site.auth_atom_id
_atom_site.pdbx_PDB_model_num
_atom_site.pdbx_label_index
ATOM 1 O "O5'" . DC A 1 1 ? -9.111 8.712 10.569 1.00 2.00 ? 1 DC A "O5'" 1 1
ATOM 2 C "C5'" . DC A 1 1 ? -7.946 8.686 9.744 1.00 7.49 ? 1 DC A "C5'" 1 1
ATOM 3 C "C4'" . DC A 1 1 ? -7.423 10.080 9.421 1.00 8.30 ? 1 DC A "C4'" 1 1
ATOM 4 O "O4'" . DC A 1 1 ? -8.491 10.944 8.812 1.00 14.74 ? 1 DC A "O4'" 1 1
ATOM 5 C "C3'" . DC A 1 1 ? -6.877 10.924 10.617 1.00 13.49 ? 1 DC A "C3'" 1 1
ATOM 6 O "O3'" . DC A 1 1 ? -5.811 11.780 10.253 1.00 13.31 ? 1 DC A "O3'" 1 1
ATOM 7 C "C2'" . DC A 1 1 ? -7.979 11.921 10.945 1.00 12.62 ? 1 DC A "C2'" 1 1
ATOM 8 C "C1'" . DC A 1 1 ? -8.537 12.170 9.526 1.00 16.96 ? 1 DC A "C1'" 1 1
ATOM 9 N N1 . DC A 1 1 ? -9.942 12.631 9.687 1.00 13.93 ? 1 DC A N1 1 1
ATOM 10 C C2 . DC A 1 1 ? -10.266 13.961 10.028 1.00 16.08 ? 1 DC A C2 1 1
ATOM 11 O O2 . DC A 1 1 ? -9.358 14.786 10.157 1.00 13.15 ? 1 DC A O2 1 1
ATOM 12 N N3 . DC A 1 1 ? -11.585 14.290 10.188 1.00 12.00 ? 1 DC A N3 1 1
ATOM 13 C C4 . DC A 1 1 ? -12.532 13.351 10.018 1.00 14.48 ? 1 DC A C4 1 1
ATOM 14 N N4 . DC A 1 1 ? -13.836 13.668 10.116 1.00 9.84 ? 1 DC A N4 1 1
ATOM 15 C C5 . DC A 1 1 ? -12.190 12.045 9.670 1.00 13.91 ? 1 DC A C5 1 1
ATOM 16 C C6 . DC A 1 1 ? -10.911 11.725 9.535 1.00 16.35 ? 1 DC A C6 1 1
ATOM 17 P P . DA A 1 2 ? -4.338 11.299 10.238 1.00 10.21 ? 2 DA A P 1 2
ATOM 18 O OP1 . DA A 1 2 ? -4.206 10.467 11.458 1.00 9.43 ? 2 DA A OP1 1 2
ATOM 19 O OP2 . DA A 1 2 ? -3.500 12.474 9.983 1.00 13.15 ? 2 DA A OP2 1 2
ATOM 20 O "O5'" . DA A 1 2 ? -4.129 10.343 9.082 1.00 9.52 ? 2 DA A "O5'" 1 2
ATOM 21 C "C5'" . DA A 1 2 ? -4.151 10.867 7.767 1.00 12.30 ? 2 DA A "C5'" 1 2
ATOM 22 C "C4'" . DA A 1 2 ? -4.268 9.730 6.770 1.00 13.87 ? 2 DA A "C4'" 1 2
ATOM 23 O "O4'" . DA A 1 2 ? -5.486 9.025 6.903 1.00 16.94 ? 2 DA A "O4'" 1 2
ATOM 24 C "C3'" . DA A 1 2 ? -4.401 10.378 5.382 1.00 19.47 ? 2 DA A "C3'" 1 2
ATOM 25 O "O3'" . DA A 1 2 ? -3.054 10.486 4.947 1.00 25.00 ? 2 DA A "O3'" 1 2
ATOM 26 C "C2'" . DA A 1 2 ? -5.232 9.394 4.524 1.00 19.99 ? 2 DA A "C2'" 1 2
ATOM 27 C "C1'" . DA A 1 2 ? -5.979 8.628 5.613 1.00 22.47 ? 2 DA A "C1'" 1 2
ATOM 28 N N9 . DA A 1 2 ? -7.400 8.841 5.646 1.00 20.18 ? 2 DA A N9 1 2
ATOM 29 C C8 . DA A 1 2 ? -8.405 7.906 5.627 1.00 20.48 ? 2 DA A C8 1 2
ATOM 30 N N7 . DA A 1 2 ? -9.631 8.431 5.654 1.00 19.56 ? 2 DA A N7 1 2
ATOM 31 C C5 . DA A 1 2 ? -9.447 9.757 5.773 1.00 20.92 ? 2 DA A C5 1 2
ATOM 32 C C6 . DA A 1 2 ? -10.331 10.853 5.929 1.00 19.88 ? 2 DA A C6 1 2
ATOM 33 N N6 . DA A 1 2 ? -11.641 10.692 5.929 1.00 18.48 ? 2 DA A N6 1 2
ATOM 34 N N1 . DA A 1 2 ? -9.790 12.063 5.995 1.00 18.17 ? 2 DA A N1 1 2
ATOM 35 C C2 . DA A 1 2 ? -8.464 12.201 5.981 1.00 18.49 ? 2 DA A C2 1 2
ATOM 36 N N3 . DA A 1 2 ? -7.506 11.275 5.870 1.00 20.79 ? 2 DA A N3 1 2
ATOM 37 C C4 . DA A 1 2 ? -8.057 10.053 5.762 1.00 23.95 ? 2 DA A C4 1 2
ATOM 38 P P . DC A 1 3 ? -2.309 11.818 4.535 1.00 24.22 ? 3 DC A P 1 3
ATOM 39 O OP1 . DC A 1 3 ? -0.896 11.588 4.097 1.00 19.70 ? 3 DC A OP1 1 3
ATOM 40 O OP2 . DC A 1 3 ? -2.533 12.876 5.671 1.00 15.48 ? 3 DC A OP2 1 3
ATOM 41 O "O5'" . DC A 1 3 ? -3.146 11.924 3.102 1.00 15.55 ? 3 DC A "O5'" 1 3
ATOM 42 C "C5'" . DC A 1 3 ? -2.756 12.905 2.045 1.00 13.95 ? 3 DC A "C5'" 1 3
ATOM 43 C "C4'" . DC A 1 3 ? -3.654 14.154 1.910 1.00 14.66 ? 3 DC A "C4'" 1 3
ATOM 44 O "O4'" . DC A 1 3 ? -4.963 13.720 1.555 1.00 10.86 ? 3 DC A "O4'" 1 3
ATOM 45 C "C3'" . DC A 1 3 ? -3.922 14.927 3.227 1.00 14.30 ? 3 DC A "C3'" 1 3
ATOM 46 O "O3'" . DC A 1 3 ? -4.255 16.334 3.017 1.00 15.76 ? 3 DC A "O3'" 1 3
ATOM 47 C "C2'" . DC A 1 3 ? -5.170 14.246 3.799 1.00 14.14 ? 3 DC A "C2'" 1 3
ATOM 48 C "C1'" . DC A 1 3 ? -5.946 14.150 2.505 1.00 12.81 ? 3 DC A "C1'" 1 3
ATOM 49 N N1 . DC A 1 3 ? -7.131 13.163 2.493 1.00 12.47 ? 3 DC A N1 1 3
ATOM 50 C C2 . DC A 1 3 ? -8.513 13.507 2.605 1.00 11.35 ? 3 DC A C2 1 3
ATOM 51 O O2 . DC A 1 3 ? -8.938 14.653 2.745 1.00 17.36 ? 3 DC A O2 1 3
ATOM 52 N N3 . DC A 1 3 ? -9.451 12.508 2.556 1.00 13.34 ? 3 DC A N3 1 3
ATOM 53 C C4 . DC A 1 3 ? -9.183 11.216 2.438 1.00 9.87 ? 3 DC A C4 1 3
ATOM 54 N N4 . DC A 1 3 ? -10.174 10.277 2.423 1.00 8.64 ? 3 DC A N4 1 3
ATOM 55 C C5 . DC A 1 3 ? -7.822 10.854 2.315 1.00 9.00 ? 3 DC A C5 1 3
ATOM 56 C C6 . DC A 1 3 ? -6.854 11.850 2.319 1.00 6.69 ? 3 DC A C6 1 3
ATOM 57 P P . DG A 1 4 ? -3.069 17.358 2.985 1.00 12.46 ? 4 DG A P 1 4
ATOM 58 O OP1 . DG A 1 4 ? -2.351 17.157 4.236 1.00 11.42 ? 4 DG A OP1 1 4
ATOM 59 O OP2 . DG A 1 4 ? -3.604 18.700 2.766 1.00 18.73 ? 4 DG A OP2 1 4
ATOM 60 O "O5'" . DG A 1 4 ? -1.988 16.882 1.819 1.00 12.29 ? 4 DG A "O5'" 1 4
ATOM 61 C "C5'" . DG A 1 4 ? -2.153 17.214 0.484 1.00 15.58 ? 4 DG A "C5'" 1 4
ATOM 62 C "C4'" . DG A 1 4 ? -1.204 16.613 -0.503 1.00 15.84 ? 4 DG A "C4'" 1 4
ATOM 63 O "O4'" . DG A 1 4 ? -0.945 15.214 -0.330 1.00 14.82 ? 4 DG A "O4'" 1 4
ATOM 64 C "C3'" . DG A 1 4 ? -1.878 16.825 -1.859 1.00 20.74 ? 4 DG A "C3'" 1 4
ATOM 65 O "O3'" . DG A 1 4 ? -1.475 18.072 -2.254 1.00 24.54 ? 4 DG A "O3'" 1 4
ATOM 66 C "C2'" . DG A 1 4 ? -1.335 15.678 -2.671 1.00 15.54 ? 4 DG A "C2'" 1 4
ATOM 67 C "C1'" . DG A 1 4 ? -1.270 14.585 -1.568 1.00 18.29 ? 4 DG A "C1'" 1 4
ATOM 68 N N9 . DG A 1 4 ? -2.349 13.543 -1.576 1.00 15.80 ? 4 DG A N9 1 4
ATOM 69 C C8 . DG A 1 4 ? -2.124 12.187 -1.755 1.00 19.20 ? 4 DG A C8 1 4
ATOM 70 N N7 . DG A 1 4 ? -3.179 11.372 -1.768 1.00 18.91 ? 4 DG A N7 1 4
ATOM 71 C C5 . DG A 1 4 ? -4.179 12.293 -1.598 1.00 17.37 ? 4 DG A C5 1 4
ATOM 72 C C6 . DG A 1 4 ? -5.576 12.022 -1.514 1.00 15.64 ? 4 DG A C6 1 4
ATOM 73 O O6 . DG A 1 4 ? -6.017 10.891 -1.574 1.00 16.64 ? 4 DG A O6 1 4
ATOM 74 N N1 . DG A 1 4 ? -6.332 13.163 -1.265 1.00 15.46 ? 4 DG A N1 1 4
ATOM 75 C C2 . DG A 1 4 ? -5.756 14.464 -1.189 1.00 12.26 ? 4 DG A C2 1 4
ATOM 76 N N2 . DG A 1 4 ? -6.512 15.541 -0.998 1.00 11.14 ? 4 DG A N2 1 4
ATOM 77 N N3 . DG A 1 4 ? -4.460 14.712 -1.259 1.00 11.45 ? 4 DG A N3 1 4
ATOM 78 C C4 . DG A 1 4 ? -3.706 13.604 -1.495 1.00 13.82 ? 4 DG A C4 1 4
ATOM 79 P P . DC A 1 5 ? -2.472 19.184 -2.839 1.00 28.28 ? 5 DC A P 1 5
ATOM 80 O OP1 . DC A 1 5 ? -1.569 20.253 -3.373 1.00 27.35 ? 5 DC A OP1 1 5
ATOM 81 O OP2 . DC A 1 5 ? -3.594 19.579 -1.881 1.00 19.90 ? 5 DC A OP2 1 5
ATOM 82 O "O5'" . DC A 1 5 ? -2.942 18.522 -4.234 1.00 19.93 ? 5 DC A "O5'" 1 5
ATOM 83 C "C5'" . DC A 1 5 ? -3.475 19.335 -5.263 1.00 12.59 ? 5 DC A "C5'" 1 5
ATOM 84 C "C4'" . DC A 1 5 ? -4.987 19.107 -5.420 1.00 8.67 ? 5 DC A "C4'" 1 5
ATOM 85 O "O4'" . DC A 1 5 ? -5.192 17.753 -5.950 1.00 11.24 ? 5 DC A "O4'" 1 5
ATOM 86 C "C3'" . DC A 1 5 ? -5.901 19.341 -4.218 1.00 5.90 ? 5 DC A "C3'" 1 5
ATOM 87 O "O3'" . DC A 1 5 ? -7.183 19.900 -4.713 1.00 8.68 ? 5 DC A "O3'" 1 5
ATOM 88 C "C2'" . DC A 1 5 ? -6.084 17.873 -3.697 1.00 11.56 ? 5 DC A "C2'" 1 5
ATOM 89 C "C1'" . DC A 1 5 ? -5.958 17.015 -4.995 1.00 13.73 ? 5 DC A "C1'" 1 5
ATOM 90 N N1 . DC A 1 5 ? -5.562 15.562 -4.908 1.00 10.13 ? 5 DC A N1 1 5
ATOM 91 C C2 . DC A 1 5 ? -6.619 14.625 -4.771 1.00 13.62 ? 5 DC A C2 1 5
ATOM 92 O O2 . DC A 1 5 ? -7.789 15.047 -4.736 1.00 12.29 ? 5 DC A O2 1 5
ATOM 93 N N3 . DC A 1 5 ? -6.321 13.317 -4.692 1.00 13.61 ? 5 DC A N3 1 5
ATOM 94 C C4 . DC A 1 5 ? -5.024 12.923 -4.706 1.00 13.55 ? 5 DC A C4 1 5
ATOM 95 N N4 . DC A 1 5 ? -4.739 11.609 -4.642 1.00 8.52 ? 5 DC A N4 1 5
ATOM 96 C C5 . DC A 1 5 ? -3.952 13.844 -4.836 1.00 15.68 ? 5 DC A C5 1 5
ATOM 97 C C6 . DC A 1 5 ? -4.263 15.145 -4.928 1.00 15.89 ? 5 DC A C6 1 5
ATOM 98 P P . DG A 1 6 ? -7.413 21.408 -4.637 1.00 13.11 ? 6 DG A P 1 6
ATOM 99 O OP1 . DG A 1 6 ? -6.918 21.870 -3.334 1.00 16.93 ? 6 DG A OP1 1 6
ATOM 100 O OP2 . DG A 1 6 ? -8.808 21.786 -4.886 1.00 14.78 ? 6 DG A OP2 1 6
ATOM 101 O "O5'" . DG A 1 6 ? -6.515 22.142 -5.695 1.00 15.51 ? 6 DG A "O5'" 1 6
ATOM 102 C "C5'" . DG A 1 6 ? -6.847 22.019 -7.066 1.00 13.53 ? 6 DG A "C5'" 1 6
ATOM 103 C "C4'" . DG A 1 6 ? -5.800 22.749 -7.862 1.00 15.76 ? 6 DG A "C4'" 1 6
ATOM 104 O "O4'" . DG A 1 6 ? -4.812 21.725 -7.813 1.00 18.85 ? 6 DG A "O4'" 1 6
ATOM 105 C "C3'" . DG A 1 6 ? -6.187 22.936 -9.382 1.00 23.31 ? 6 DG A "C3'" 1 6
ATOM 106 O "O3'" . DG A 1 6 ? -6.128 24.292 -9.953 1.00 23.87 ? 6 DG A "O3'" 1 6
ATOM 107 C "C2'" . DG A 1 6 ? -5.279 21.949 -10.162 1.00 24.61 ? 6 DG A "C2'" 1 6
ATOM 108 C "C1'" . DG A 1 6 ? -4.245 21.525 -9.124 1.00 21.18 ? 6 DG A "C1'" 1 6
ATOM 109 N N9 . DG A 1 6 ? -3.783 20.129 -9.216 1.00 20.36 ? 6 DG A N9 1 6
ATOM 110 C C8 . DG A 1 6 ? -2.493 19.653 -9.377 1.00 22.52 ? 6 DG A C8 1 6
ATOM 111 N N7 . DG A 1 6 ? -2.357 18.360 -9.320 1.00 21.93 ? 6 DG A N7 1 6
ATOM 112 C C5 . DG A 1 6 ? -3.684 17.935 -9.093 1.00 23.03 ? 6 DG A C5 1 6
ATOM 113 C C6 . DG A 1 6 ? -4.241 16.623 -8.929 1.00 22.41 ? 6 DG A C6 1 6
ATOM 114 O O6 . DG A 1 6 ? -3.613 15.564 -8.997 1.00 23.13 ? 6 DG A O6 1 6
ATOM 115 N N1 . DG A 1 6 ? -5.633 16.636 -8.679 1.00 23.42 ? 6 DG A N1 1 6
ATOM 116 C C2 . DG A 1 6 ? -6.441 17.792 -8.569 1.00 24.20 ? 6 DG A C2 1 6
ATOM 117 N N2 . DG A 1 6 ? -7.778 17.719 -8.308 1.00 23.15 ? 6 DG A N2 1 6
ATOM 118 N N3 . DG A 1 6 ? -5.921 19.008 -8.693 1.00 22.08 ? 6 DG A N3 1 6
ATOM 119 C C4 . DG A 1 6 ? -4.558 19.013 -8.972 1.00 23.45 ? 6 DG A C4 1 6
ATOM 120 O "O5'" . DC B 2 1 ? -10.009 8.757 -8.551 1.00 11.46 ? 7 DC B "O5'" 1 1
ATOM 121 C "C5'" . DC B 2 1 ? -10.813 9.037 -7.439 1.00 4.60 ? 7 DC B "C5'" 1 1
ATOM 122 C "C4'" . DC B 2 1 ? -11.030 10.527 -7.426 1.00 9.70 ? 7 DC B "C4'" 1 1
ATOM 123 O "O4'" . DC B 2 1 ? -9.768 11.159 -6.944 1.00 11.22 ? 7 DC B "O4'" 1 1
ATOM 124 C "C3'" . DC B 2 1 ? -11.416 11.317 -8.736 1.00 7.58 ? 7 DC B "C3'" 1 1
ATOM 125 O "O3'" . DC B 2 1 ? -12.371 12.344 -8.377 1.00 12.90 ? 7 DC B "O3'" 1 1
ATOM 126 C "C2'" . DC B 2 1 ? -10.082 11.873 -9.213 1.00 9.13 ? 7 DC B "C2'" 1 1
ATOM 127 C "C1'" . DC B 2 1 ? -9.387 12.168 -7.868 1.00 8.72 ? 7 DC B "C1'" 1 1
ATOM 128 N N1 . DC B 2 1 ? -7.895 12.276 -7.906 1.00 9.54 ? 7 DC B N1 1 1
ATOM 129 C C2 . DC B 2 1 ? -7.292 13.524 -8.010 1.00 9.14 ? 7 DC B C2 1 1
ATOM 130 O O2 . DC B 2 1 ? -7.962 14.539 -8.039 1.00 15.85 ? 7 DC B O2 1 1
ATOM 131 N N3 . DC B 2 1 ? -5.975 13.615 -8.063 1.00 14.71 ? 7 DC B N3 1 1
ATOM 132 C C4 . DC B 2 1 ? -5.273 12.494 -8.013 1.00 11.55 ? 7 DC B C4 1 1
ATOM 133 N N4 . DC B 2 1 ? -3.956 12.609 -8.013 1.00 9.01 ? 7 DC B N4 1 1
ATOM 134 C C5 . DC B 2 1 ? -5.879 11.217 -7.876 1.00 10.22 ? 7 DC B C5 1 1
ATOM 135 C C6 . DC B 2 1 ? -7.196 11.148 -7.834 1.00 4.22 ? 7 DC B C6 1 1
ATOM 136 P P . DG B 2 2 ? -13.889 12.017 -8.211 1.00 18.44 ? 8 DG B P 1 2
ATOM 137 O OP1 . DG B 2 2 ? -14.328 11.177 -9.373 1.00 15.42 ? 8 DG B OP1 1 2
ATOM 138 O OP2 . DG B 2 2 ? -14.579 13.266 -7.926 1.00 17.69 ? 8 DG B OP2 1 2
ATOM 139 O "O5'" . DG B 2 2 ? -13.847 11.138 -6.832 1.00 11.86 ? 8 DG B "O5'" 1 2
ATOM 140 C "C5'" . DG B 2 2 ? -14.544 11.617 -5.794 1.00 13.61 ? 8 DG B "C5'" 1 2
ATOM 141 C "C4'" . DG B 2 2 ? -14.805 10.381 -4.978 1.00 12.91 ? 8 DG B "C4'" 1 2
ATOM 142 O "O4'" . DG B 2 2 ? -13.714 9.474 -5.056 1.00 10.67 ? 8 DG B "O4'" 1 2
ATOM 143 C "C3'" . DG B 2 2 ? -14.618 10.999 -3.665 1.00 16.66 ? 8 DG B "C3'" 1 2
ATOM 144 O "O3'" . DG B 2 2 ? -15.869 11.294 -3.227 1.00 22.84 ? 8 DG B "O3'" 1 2
ATOM 145 C "C2'" . DG B 2 2 ? -13.901 9.988 -2.783 1.00 17.69 ? 8 DG B "C2'" 1 2
ATOM 146 C "C1'" . DG B 2 2 ? -13.402 8.961 -3.800 1.00 11.38 ? 8 DG B "C1'" 1 2
ATOM 147 N N9 . DG B 2 2 ? -11.978 8.929 -3.776 1.00 16.35 ? 8 DG B N9 1 2
ATOM 148 C C8 . DG B 2 2 ? -11.237 7.786 -3.636 1.00 11.62 ? 8 DG B C8 1 2
ATOM 149 N N7 . DG B 2 2 ? -9.966 8.076 -3.747 1.00 10.13 ? 8 DG B N7 1 2
ATOM 150 C C5 . DG B 2 2 ? -9.809 9.429 -3.890 1.00 16.21 ? 8 DG B C5 1 2
ATOM 151 C C6 . DG B 2 2 ? -8.631 10.272 -3.960 1.00 15.32 ? 8 DG B C6 1 2
ATOM 152 O O6 . DG B 2 2 ? -7.475 9.963 -3.981 1.00 13.42 ? 8 DG B O6 1 2
ATOM 153 N N1 . DG B 2 2 ? -8.941 11.602 -4.110 1.00 15.27 ? 8 DG B N1 1 2
ATOM 154 C C2 . DG B 2 2 ? -10.216 12.144 -4.162 1.00 11.84 ? 8 DG B C2 1 2
ATOM 155 N N2 . DG B 2 2 ? -10.303 13.490 -4.298 1.00 2.00 ? 8 DG B N2 1 2
ATOM 156 N N3 . DG B 2 2 ? -11.297 11.372 -4.071 1.00 13.75 ? 8 DG B N3 1 2
ATOM 157 C C4 . DG B 2 2 ? -11.062 10.028 -3.887 1.00 15.79 ? 8 DG B C4 1 2
ATOM 158 P P . DC B 2 3 ? -16.078 12.812 -2.711 1.00 28.43 ? 9 DC B P 1 3
ATOM 159 O OP1 . DC B 2 3 ? -17.195 12.793 -2.127 1.00 23.30 ? 9 DC B OP1 1 3
ATOM 160 O OP2 . DC B 2 3 ? -15.939 13.509 -4.034 1.00 26.38 ? 9 DC B OP2 1 3
ATOM 161 O "O5'" . DC B 2 3 ? -15.021 13.202 -1.496 1.00 21.78 ? 9 DC B "O5'" 1 3
ATOM 162 C "C5'" . DC B 2 3 ? -15.273 14.098 -0.378 1.00 14.89 ? 9 DC B "C5'" 1 3
ATOM 163 C "C4'" . DC B 2 3 ? -14.123 15.047 -0.212 1.00 15.65 ? 9 DC B "C4'" 1 3
ATOM 164 O "O4'" . DC B 2 3 ? -12.995 14.366 0.370 1.00 18.18 ? 9 DC B "O4'" 1 3
ATOM 165 C "C3'" . DC B 2 3 ? -13.595 15.787 -1.463 1.00 11.42 ? 9 DC B "C3'" 1 3
ATOM 166 O "O3'" . DC B 2 3 ? -13.088 17.166 -1.088 1.00 12.49 ? 9 DC B "O3'" 1 3
ATOM 167 C "C2'" . DC B 2 3 ? -12.436 14.938 -1.842 1.00 11.54 ? 9 DC B "C2'" 1 3
ATOM 168 C "C1'" . DC B 2 3 ? -11.862 14.624 -0.439 1.00 16.85 ? 9 DC B "C1'" 1 3
ATOM 169 N N1 . DC B 2 3 ? -11.117 13.375 -0.547 1.00 15.13 ? 9 DC B N1 1 3
ATOM 170 C C2 . DC B 2 3 ? -9.724 13.446 -0.516 1.00 14.79 ? 9 DC B C2 1 3
ATOM 171 O O2 . DC B 2 3 ? -9.175 14.527 -0.361 1.00 15.50 ? 9 DC B O2 1 3
ATOM 172 N N3 . DC B 2 3 ? -9.053 12.303 -0.618 1.00 13.21 ? 9 DC B N3 1 3
ATOM 173 C C4 . DC B 2 3 ? -9.718 11.157 -0.844 1.00 11.06 ? 9 DC B C4 1 3
ATOM 174 N N4 . DC B 2 3 ? -8.967 10.083 -0.893 1.00 16.41 ? 9 DC B N4 1 3
ATOM 175 C C5 . DC B 2 3 ? -11.150 11.029 -0.856 1.00 15.07 ? 9 DC B C5 1 3
ATOM 176 C C6 . DC B 2 3 ? -11.813 12.198 -0.705 1.00 11.47 ? 9 DC B C6 1 3
ATOM 177 P P . DG B 2 4 ? -14.151 18.359 -0.861 1.00 20.27 ? 10 DG B P 1 4
ATOM 178 O OP1 . DG B 2 4 ? -15.170 18.355 -1.893 1.00 10.89 ? 10 DG B OP1 1 4
ATOM 179 O OP2 . DG B 2 4 ? -13.356 19.630 -0.719 1.00 13.81 ? 10 DG B OP2 1 4
ATOM 180 O "O5'" . DG B 2 4 ? -14.975 17.821 0.426 1.00 11.33 ? 10 DG B "O5'" 1 4
ATOM 181 C "C5'" . DG B 2 4 ? -14.914 18.531 1.663 1.00 13.51 ? 10 DG B "C5'" 1 4
ATOM 182 C "C4'" . DG B 2 4 ? -15.994 18.077 2.564 1.00 5.32 ? 10 DG B "C4'" 1 4
ATOM 183 O "O4'" . DG B 2 4 ? -16.440 16.659 2.316 1.00 14.78 ? 10 DG B "O4'" 1 4
ATOM 184 C "C3'" . DG B 2 4 ? -15.475 18.064 3.944 1.00 11.38 ? 10 DG B "C3'" 1 4
ATOM 185 O "O3'" . DG B 2 4 ? -15.814 19.329 4.382 1.00 12.49 ? 10 DG B "O3'" 1 4
ATOM 186 C "C2'" . DG B 2 4 ? -16.259 16.939 4.677 1.00 10.75 ? 10 DG B "C2'" 1 4
ATOM 187 C "C1'" . DG B 2 4 ? -16.653 15.967 3.602 1.00 11.80 ? 10 DG B "C1'" 1 4
ATOM 188 N N9 . DG B 2 4 ? -15.948 14.724 3.514 1.00 12.55 ? 10 DG B N9 1 4
ATOM 189 C C8 . DG B 2 4 ? -16.539 13.471 3.418 1.00 11.62 ? 10 DG B C8 1 4
ATOM 190 N N7 . DG B 2 4 ? -15.754 12.507 3.237 1.00 9.60 ? 10 DG B N7 1 4
ATOM 191 C C5 . DG B 2 4 ? -14.479 13.129 3.213 1.00 14.54 ? 10 DG B C5 1 4
ATOM 192 C C6 . DG B 2 4 ? -13.150 12.539 3.101 1.00 17.74 ? 10 DG B C6 1 4
ATOM 193 O O6 . DG B 2 4 ? -12.789 11.329 2.939 1.00 18.48 ? 10 DG B O6 1 4
ATOM 194 N N1 . DG B 2 4 ? -12.186 13.539 3.149 1.00 14.74 ? 10 DG B N1 1 4
ATOM 195 C C2 . DG B 2 4 ? -12.353 14.897 3.251 1.00 10.68 ? 10 DG B C2 1 4
ATOM 196 N N2 . DG B 2 4 ? -11.206 15.675 3.250 1.00 8.96 ? 10 DG B N2 1 4
ATOM 197 N N3 . DG B 2 4 ? -13.557 15.437 3.383 1.00 11.17 ? 10 DG B N3 1 4
ATOM 198 C C4 . DG B 2 4 ? -14.572 14.494 3.374 1.00 14.50 ? 10 DG B C4 1 4
ATOM 199 P P . DT B 2 5 ? -14.760 20.333 5.015 1.00 10.00 ? 11 DT B P 1 5
ATOM 200 O OP1 . DT B 2 5 ? -15.524 21.400 5.706 1.00 9.96 ? 11 DT B OP1 1 5
ATOM 201 O OP2 . DT B 2 5 ? -13.799 20.719 3.973 1.00 8.38 ? 11 DT B OP2 1 5
ATOM 202 O "O5'" . DT B 2 5 ? -14.002 19.420 6.087 1.00 11.75 ? 11 DT B "O5'" 1 5
ATOM 203 C "C5'" . DT B 2 5 ? -13.220 20.187 6.932 1.00 13.19 ? 11 DT B "C5'" 1 5
ATOM 204 C "C4'" . DT B 2 5 ? -11.868 19.639 7.142 1.00 10.18 ? 11 DT B "C4'" 1 5
ATOM 205 O "O4'" . DT B 2 5 ? -12.027 18.311 7.751 1.00 12.78 ? 11 DT B "O4'" 1 5
ATOM 206 C "C3'" . DT B 2 5 ? -10.943 19.557 5.906 1.00 12.89 ? 11 DT B "C3'" 1 5
ATOM 207 O "O3'" . DT B 2 5 ? -9.565 19.935 6.347 1.00 16.80 ? 11 DT B "O3'" 1 5
ATOM 208 C "C2'" . DT B 2 5 ? -10.980 18.073 5.594 1.00 16.65 ? 11 DT B "C2'" 1 5
ATOM 209 C "C1'" . DT B 2 5 ? -11.284 17.374 6.922 1.00 12.25 ? 11 DT B "C1'" 1 5
ATOM 210 N N1 . DT B 2 5 ? -12.001 16.077 6.876 1.00 14.60 ? 11 DT B N1 1 5
ATOM 211 C C2 . DT B 2 5 ? -11.260 14.916 6.844 1.00 17.52 ? 11 DT B C2 1 5
ATOM 212 O O2 . DT B 2 5 ? -10.071 14.904 6.786 1.00 17.07 ? 11 DT B O2 1 5
ATOM 213 N N3 . DT B 2 5 ? -11.950 13.754 6.811 1.00 18.46 ? 11 DT B N3 1 5
ATOM 214 C C4 . DT B 2 5 ? -13.342 13.640 6.818 1.00 18.02 ? 11 DT B C4 1 5
ATOM 215 O O4 . DT B 2 5 ? -13.879 12.551 6.818 1.00 19.30 ? 11 DT B O4 1 5
ATOM 216 C C5 . DT B 2 5 ? -14.086 14.874 6.942 1.00 17.60 ? 11 DT B C5 1 5
ATOM 217 C C7 . DT B 2 5 ? -15.583 14.767 7.032 1.00 14.23 ? 11 DT B C7 1 5
ATOM 218 C C6 . DT B 2 5 ? -13.381 16.012 6.898 1.00 9.53 ? 11 DT B C6 1 5
ATOM 219 P P . DG B 2 6 ? -9.156 21.459 6.400 1.00 19.71 ? 12 DG B P 1 6
ATOM 220 O OP1 . DG B 2 6 ? -9.802 22.303 5.448 1.00 14.41 ? 12 DG B OP1 1 6
ATOM 221 O OP2 . DG B 2 6 ? -7.722 21.529 6.853 1.00 22.35 ? 12 DG B OP2 1 6
ATOM 222 O "O5'" . DG B 2 6 ? -9.898 22.088 7.658 1.00 14.99 ? 12 DG B "O5'" 1 6
ATOM 223 C "C5'" . DG B 2 6 ? -9.615 21.596 8.899 1.00 14.14 ? 12 DG B "C5'" 1 6
ATOM 224 C "C4'" . DG B 2 6 ? -10.036 22.698 9.812 1.00 11.67 ? 12 DG B "C4'" 1 6
ATOM 225 O "O4'" . DG B 2 6 ? -11.520 22.691 9.800 1.00 14.52 ? 12 DG B "O4'" 1 6
ATOM 226 C "C3'" . DG B 2 6 ? -9.582 22.253 11.170 1.00 13.83 ? 12 DG B "C3'" 1 6
ATOM 227 O "O3'" . DG B 2 6 ? -8.858 23.396 11.708 1.00 23.58 ? 12 DG B "O3'" 1 6
ATOM 228 C "C2'" . DG B 2 6 ? -10.858 22.050 11.994 1.00 12.85 ? 12 DG B "C2'" 1 6
ATOM 229 C "C1'" . DG B 2 6 ? -12.048 22.209 11.026 1.00 8.88 ? 12 DG B "C1'" 1 6
ATOM 230 N N9 . DG B 2 6 ? -12.843 20.997 10.966 1.00 10.77 ? 12 DG B N9 1 6
ATOM 231 C C8 . DG B 2 6 ? -14.224 20.944 11.018 1.00 5.96 ? 12 DG B C8 1 6
ATOM 232 N N7 . DG B 2 6 ? -14.695 19.782 10.881 1.00 5.06 ? 12 DG B N7 1 6
ATOM 233 C C5 . DG B 2 6 ? -13.578 18.930 10.825 1.00 10.14 ? 12 DG B C5 1 6
ATOM 234 C C6 . DG B 2 6 ? -13.434 17.507 10.744 1.00 12.79 ? 12 DG B C6 1 6
ATOM 235 O O6 . DG B 2 6 ? -14.339 16.697 10.673 1.00 12.24 ? 12 DG B O6 1 6
ATOM 236 N N1 . DG B 2 6 ? -12.069 17.085 10.685 1.00 12.40 ? 12 DG B N1 1 6
ATOM 237 C C2 . DG B 2 6 ? -10.987 17.949 10.610 1.00 11.34 ? 12 DG B C2 1 6
ATOM 238 N N2 . DG B 2 6 ? -9.702 17.488 10.560 1.00 2.92 ? 12 DG B N2 1 6
ATOM 239 N N3 . DG B 2 6 ? -11.154 19.220 10.759 1.00 12.34 ? 12 DG B N3 1 6
ATOM 240 C C4 . DG B 2 6 ? -12.428 19.675 10.826 1.00 11.93 ? 12 DG B C4 1 6
ATOM 241 P P . DT C 3 1 ? -6.953 -4.284 -0.631 0.83 16.57 ? 13 DT C P 1 1
ATOM 242 O OP1 . DT C 3 1 ? -7.893 -3.324 -1.257 0.83 20.48 ? 13 DT C OP1 1 1
ATOM 243 O OP2 . DT C 3 1 ? -7.144 -5.729 -0.504 0.83 22.48 ? 13 DT C OP2 1 1
ATOM 244 O "O5'" . DT C 3 1 ? -5.511 -3.895 -0.930 1.00 8.06 ? 13 DT C "O5'" 1 1
ATOM 245 C "C5'" . DT C 3 1 ? -4.691 -4.911 -1.536 1.00 5.63 ? 13 DT C "C5'" 1 1
ATOM 246 C "C4'" . DT C 3 1 ? -3.298 -4.411 -1.814 1.00 6.32 ? 13 DT C "C4'" 1 1
ATOM 247 O "O4'" . DT C 3 1 ? -3.470 -3.045 -2.225 1.00 9.58 ? 13 DT C "O4'" 1 1
ATOM 248 C "C3'" . DT C 3 1 ? -2.463 -4.401 -0.526 1.00 10.70 ? 13 DT C "C3'" 1 1
ATOM 249 O "O3'" . DT C 3 1 ? -1.060 -4.845 -0.853 1.00 14.54 ? 13 DT C "O3'" 1 1
ATOM 250 C "C2'" . DT C 3 1 ? -2.527 -2.946 -0.118 1.00 7.95 ? 13 DT C "C2'" 1 1
ATOM 251 C "C1'" . DT C 3 1 ? -2.471 -2.325 -1.540 1.00 9.51 ? 13 DT C "C1'" 1 1
ATOM 252 N N1 . DT C 3 1 ? -2.879 -0.932 -1.465 1.00 10.60 ? 13 DT C N1 1 1
ATOM 253 C C2 . DT C 3 1 ? -1.981 0.061 -1.050 1.00 11.16 ? 13 DT C C2 1 1
ATOM 254 O O2 . DT C 3 1 ? -0.833 -0.201 -0.776 1.00 13.92 ? 13 DT C O2 1 1
ATOM 255 N N3 . DT C 3 1 ? -2.479 1.328 -1.009 1.00 3.92 ? 13 DT C N3 1 1
ATOM 256 C C4 . DT C 3 1 ? -3.777 1.610 -1.207 1.00 9.90 ? 13 DT C C4 1 1
ATOM 257 O O4 . DT C 3 1 ? -4.154 2.724 -1.077 1.00 11.42 ? 13 DT C O4 1 1
ATOM 258 C C5 . DT C 3 1 ? -4.676 0.542 -1.667 1.00 9.31 ? 13 DT C C5 1 1
ATOM 259 C C7 . DT C 3 1 ? -6.132 0.763 -1.989 0.17 8.93 ? 13 DT C C7 1 1
ATOM 260 C C6 . DT C 3 1 ? -4.187 -0.664 -1.754 1.00 11.72 ? 13 DT C C6 1 1
ATOM 261 P P . DG C 3 2 ? -0.548 -6.340 -0.622 1.00 13.95 ? 14 DG C P 1 2
ATOM 262 O OP1 . DG C 3 2 ? -1.462 -6.798 0.436 1.00 14.13 ? 14 DG C OP1 1 2
ATOM 263 O OP2 . DG C 3 2 ? 0.952 -6.393 -0.458 1.00 15.48 ? 14 DG C OP2 1 2
ATOM 264 O "O5'" . DG C 3 2 ? -1.000 -7.159 -1.934 1.00 11.93 ? 14 DG C "O5'" 1 2
ATOM 265 C "C5'" . DG C 3 2 ? -1.017 -6.607 -3.261 1.00 9.84 ? 14 DG C "C5'" 1 2
ATOM 266 C "C4'" . DG C 3 2 ? -1.840 -7.448 -4.233 1.00 7.37 ? 14 DG C "C4'" 1 2
ATOM 267 O "O4'" . DG C 3 2 ? -3.242 -7.105 -4.164 1.00 8.66 ? 14 DG C "O4'" 1 2
ATOM 268 C "C3'" . DG C 3 2 ? -1.490 -7.221 -5.692 1.00 8.43 ? 14 DG C "C3'" 1 2
ATOM 269 O "O3'" . DG C 3 2 ? -0.992 -8.407 -6.111 1.00 8.00 ? 14 DG C "O3'" 1 2
ATOM 270 C "C2'" . DG C 3 2 ? -2.792 -7.063 -6.464 1.00 9.25 ? 14 DG C "C2'" 1 2
ATOM 271 C "C1'" . DG C 3 2 ? -3.854 -6.955 -5.416 1.00 8.96 ? 14 DG C "C1'" 1 2
ATOM 272 N N9 . DG C 3 2 ? -4.530 -5.639 -5.462 1.00 7.54 ? 14 DG C N9 1 2
ATOM 273 C C8 . DG C 3 2 ? -5.890 -5.402 -5.488 1.00 11.58 ? 14 DG C C8 1 2
ATOM 274 N N7 . DG C 3 2 ? -6.228 -4.140 -5.466 1.00 8.90 ? 14 DG C N7 1 2
ATOM 275 C C5 . DG C 3 2 ? -5.030 -3.525 -5.377 1.00 5.14 ? 14 DG C C5 1 2
ATOM 276 C C6 . DG C 3 2 ? -4.776 -2.142 -5.320 1.00 6.85 ? 14 DG C C6 1 2
ATOM 277 O O6 . DG C 3 2 ? -5.587 -1.233 -5.328 1.00 6.76 ? 14 DG C O6 1 2
ATOM 278 N N1 . DG C 3 2 ? -3.438 -1.829 -5.222 1.00 6.36 ? 14 DG C N1 1 2
ATOM 279 C C2 . DG C 3 2 ? -2.399 -2.764 -5.236 1.00 10.36 ? 14 DG C C2 1 2
ATOM 280 N N2 . DG C 3 2 ? -1.152 -2.280 -5.113 0.83 7.79 ? 14 DG C N2 1 2
ATOM 281 N N3 . DG C 3 2 ? -2.601 -4.073 -5.223 1.00 8.30 ? 14 DG C N3 1 2
ATOM 282 C C4 . DG C 3 2 ? -3.954 -4.377 -5.361 1.00 5.71 ? 14 DG C C4 1 2
ATOM 283 O "O5'" . DT D 3 1 ? -0.271 6.626 -4.965 1.00 12.93 ? 15 DT D "O5'" 1 1
ATOM 284 C "C5'" . DT D 3 1 ? 0.849 6.406 -3.905 1.00 3.14 ? 15 DT D "C5'" 1 1
ATOM 285 C "C4'" . DT D 3 1 ? 1.397 5.016 -3.677 1.00 6.99 ? 15 DT D "C4'" 1 1
ATOM 286 O "O4'" . DT D 3 1 ? 0.392 4.117 -3.164 1.00 15.13 ? 15 DT D "O4'" 1 1
ATOM 287 C "C3'" . DT D 3 1 ? 1.903 4.372 -4.989 1.00 7.75 ? 15 DT D "C3'" 1 1
ATOM 288 O "O3'" . DT D 3 1 ? 2.995 3.602 -4.730 1.00 13.54 ? 15 DT D "O3'" 1 1
ATOM 289 C "C2'" . DT D 3 1 ? 0.730 3.469 -5.393 1.00 7.12 ? 15 DT D "C2'" 1 1
ATOM 290 C "C1'" . DT D 3 1 ? 0.249 2.968 -4.015 1.00 8.71 ? 15 DT D "C1'" 1 1
ATOM 291 N N1 . DT D 3 1 ? -1.152 2.652 -4.102 1.00 4.97 ? 15 DT D N1 1 1
ATOM 292 C C2 . DT D 3 1 ? -1.467 1.302 -4.303 1.00 3.66 ? 15 DT D C2 1 1
ATOM 293 O O2 . DT D 3 1 ? -0.672 0.382 -4.350 1.00 6.29 ? 15 DT D O2 1 1
ATOM 294 N N3 . DT D 3 1 ? -2.749 1.079 -4.378 1.00 6.12 ? 15 DT D N3 1 1
ATOM 295 C C4 . DT D 3 1 ? -3.778 1.997 -4.424 1.00 7.98 ? 15 DT D C4 1 1
ATOM 296 O O4 . DT D 3 1 ? -4.920 1.588 -4.540 1.00 11.60 ? 15 DT D O4 1 1
ATOM 297 C C5 . DT D 3 1 ? -3.417 3.343 -4.174 1.00 7.34 ? 15 DT D C5 1 1
ATOM 298 C C7 . DT D 3 1 ? -4.418 4.449 -4.120 0.17 7.60 ? 15 DT D C7 1 1
ATOM 299 C C6 . DT D 3 1 ? -2.099 3.613 -4.031 1.00 5.68 ? 15 DT D C6 1 1
ATOM 300 P P . DG D 3 2 ? 4.524 4.075 -4.695 1.00 15.62 ? 16 DG D P 1 2
ATOM 301 O OP1 . DG D 3 2 ? 4.669 4.713 -5.963 1.00 14.49 ? 16 DG D OP1 1 2
ATOM 302 O OP2 . DG D 3 2 ? 5.384 2.916 -4.357 1.00 14.39 ? 16 DG D OP2 1 2
ATOM 303 O "O5'" . DG D 3 2 ? 4.678 5.141 -3.471 1.00 15.85 ? 16 DG D "O5'" 1 2
ATOM 304 C "C5'" . DG D 3 2 ? 4.505 4.645 -2.186 1.00 6.64 ? 16 DG D "C5'" 1 2
ATOM 305 C "C4'" . DG D 3 2 ? 4.629 5.729 -1.201 1.00 8.45 ? 16 DG D "C4'" 1 2
ATOM 306 O "O4'" . DG D 3 2 ? 3.595 6.707 -1.450 1.00 9.49 ? 16 DG D "O4'" 1 2
ATOM 307 C "C3'" . DG D 3 2 ? 4.524 5.254 0.263 1.00 7.72 ? 16 DG D "C3'" 1 2
ATOM 308 O "O3'" . DG D 3 2 ? 5.798 5.197 0.925 1.00 10.46 ? 16 DG D "O3'" 1 2
ATOM 309 C "C2'" . DG D 3 2 ? 3.720 6.350 0.908 1.00 2.00 ? 16 DG D "C2'" 1 2
ATOM 310 C "C1'" . DG D 3 2 ? 2.971 7.074 -0.233 1.00 7.65 ? 16 DG D "C1'" 1 2
ATOM 311 N N9 . DG D 3 2 ? 1.548 6.714 -0.417 1.00 10.28 ? 16 DG D N9 1 2
ATOM 312 C C8 . DG D 3 2 ? 0.566 7.611 -0.666 1.00 8.97 ? 16 DG D C8 1 2
ATOM 313 N N7 . DG D 3 2 ? -0.583 7.032 -0.809 1.00 10.30 ? 16 DG D N7 1 2
ATOM 314 C C5 . DG D 3 2 ? -0.426 5.722 -0.677 1.00 11.47 ? 16 DG D C5 1 2
ATOM 315 C C6 . DG D 3 2 ? -1.416 4.670 -0.753 1.00 11.93 ? 16 DG D C6 1 2
ATOM 316 O O6 . DG D 3 2 ? -2.616 4.786 -0.937 1.00 16.67 ? 16 DG D O6 1 2
ATOM 317 N N1 . DG D 3 2 ? -0.830 3.409 -0.608 1.00 13.62 ? 16 DG D N1 1 2
ATOM 318 C C2 . DG D 3 2 ? 0.474 3.246 -0.394 1.00 9.13 ? 16 DG D C2 1 2
ATOM 319 N N2 . DG D 3 2 ? 0.855 1.988 -0.230 0.83 12.64 ? 16 DG D N2 1 2
ATOM 320 N N3 . DG D 3 2 ? 1.388 4.252 -0.298 1.00 13.04 ? 16 DG D N3 1 2
ATOM 321 C C4 . DG D 3 2 ? 0.889 5.472 -0.428 1.00 6.92 ? 16 DG D C4 1 2
HETATM 322 BA BA A BA E 4 . ? -4.214 8.576 -0.522 0.70 36.18 ? 101 BA D BA 1 101
HETATM 323 BA BA B BA E 4 . ? -3.363 7.222 -1.464 0.30 23.96 ? 101 BA D BA 1 101
HETATM 324 O O . HOH F 5 . ? 0.759 15.944 -8.757 1.00 15.91 ? 101 HOH A O 1 101
HETATM 325 O O . HOH F 5 . ? -3.207 21.410 -12.766 1.00 23.41 ? 102 HOH A O 1 102
HETATM 326 O O . HOH F 5 . ? -3.104 20.540 0.804 1.00 18.52 ? 103 HOH A O 1 103
HETATM 327 O O A HOH F 5 . ? -12.279 7.802 6.746 0.70 4.20 ? 104 HOH A O 1 104
HETATM 328 O O B HOH F 5 . ? -12.116 8.938 7.379 0.30 7.25 ? 104 HOH A O 1 104
HETATM 329 O O . HOH G 5 . ? -12.654 16.149 -8.291 1.00 20.08 ? 101 HOH B O 1 101
HETATM 330 O O . HOH G 5 . ? -10.893 7.458 -0.579 1.00 25.46 ? 102 HOH B O 1 102
HETATM 331 O O . HOH G 5 . ? -15.324 23.763 3.860 1.00 20.04 ? 103 HOH B O 1 103
HETATM 332 O O . HOH G 5 . ? -10.814 8.688 -10.593 1.00 18.03 ? 104 HOH B O 1 104
HETATM 333 O O . HOH G 5 . ? -17.598 8.217 -0.605 1.00 20.81 ? 105 HOH B O 1 105
HETATM 334 O O . HOH G 5 . ? -13.353 23.947 7.971 1.00 27.35 ? 106 HOH B O 1 106
HETATM 335 O O . HOH H 5 . ? -8.395 -1.893 -4.613 1.00 17.87 ? 101 HOH C O 1 101
HETATM 336 O O . HOH H 5 . ? -8.193 -2.175 -7.618 1.00 24.47 ? 102 HOH C O 1 102
HETATM 337 O O . HOH H 5 . ? -7.258 3.628 -4.194 1.00 23.47 ? 103 HOH C O 1 103
HETATM 338 O O . HOH H 5 . ? -7.650 3.669 -1.594 1.00 28.36 ? 104 HOH C O 1 104
HETATM 339 O O . HOH I 5 . ? 5.784 8.385 1.278 1.00 24.50 ? 201 HOH D O 1 201
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