data_wwPDB_remediated_restraints_file_for_PDB_entry_2kjh # This wwPDB archive file contains, for PDB entry 2kjh: # # - Sequence information from the PDB mmCIF file # - NMR restraints from the PDB MR file # # In this file, the NMR restraints share the same atom names as in the coordinate # file, and in this way can differ from the data deposited at the wwPDB. To achieve # this aim, the NMR restraints were parsed from their original format files, and # the coordinates and NMR restraints information were subsequently harmonized. # # Due to the complexity of this harmonization process, minor modifications could # have occurred to the NMR restraints information, or data could have been lost # because of parsing or conversion errors. The PDB file remains the # authoritative reference for the atomic coordinates and the originally deposited # restraints files remain the primary reference for these data. # # This file is generated as part of the wwPDB at the BioMagResBank (BMRB) in # collaboration with the PDBe (formerly MSD) group at the European # Bioinformatics Institute (EBI) and the CMBI/IMM group at the Radboud # University of Nijmegen. # # Several software packages were used to produce this file: # # - Wattos (BMRB and CMBI/IMM). # - FormatConverter and NMRStarExport (PDBe). # - CCPN framework (http://www.ccpn.ac.uk/). # # More information about this process can be found in the references below. # Please cite the original reference for this PDB entry. # # JF Doreleijers, A Nederveen, W Vranken, J Lin, AM Bonvin, R Kaptein, JL # Markley, and EL Ulrich (2005). BioMagResBank databases DOCR and FRED # containing converted and filtered sets of experimental NMR restraints and # coordinates from over 500 protein PDB structures. J. Biomol. NMR 32, 1-12. # # WF Vranken, W Boucher, TJ Stevens, RH Fogh, A Pajon, M Llinas, EL Ulrich, JL # Markley, J Ionides, ED Laue (2005). The CCPN data model for NMR spectroscopy: # development of a software pipeline. Proteins 59, 687-696. # # JF Doreleijers, WF Vranken, C Schulte, J Lin, JR Wedell, CJ Penkett, GW Vuister, # G Vriend, JL Markley, and EL Ulrich (2009). The NMR Restraints Grid at BMRB for # 5,266 Protein and Nucleic Acid PDB Entries. J Biomol. NMR 45, 389-396. ####################### # Entry information # ####################### save_entry_information _Entry.Sf_category entry_information _Entry.Sf_framecode entry_information _Entry.ID rr_2kjh _Entry.Title 'wwPDB remediated NMR restraints for PDB entry 2kjh' _Entry.Version_type original _Entry.NMR_STAR_version 3.1.0.8 _Entry.Experimental_method NMR _Entry.Experimental_method_subtype solution _Entry.Details 'Contains the remediated restraint lists and coordinates for PDB entry 2kjh' _Entry.PDB_coordinate_file_version 3.20 loop_ _Related_entries.Database_name _Related_entries.Database_accession_code _Related_entries.Relationship _Related_entries.Entry_ID PDB 2kjh 'Master copy' rr_2kjh stop_ save_ ############################################# # Molecular system (assembly) description # ############################################# save_assembly _Assembly.Sf_category assembly _Assembly.Sf_framecode assembly _Assembly.Entry_ID rr_2kjh _Assembly.ID 1 _Assembly.Name 2kjh _Assembly.Number_of_components 2 _Assembly.Organic_ligands 0 _Assembly.Metal_ions 0 _Assembly.Non_standard_bonds no _Assembly.Paramagnetic no _Assembly.Thiol_state 'all free' _Assembly.Molecular_mass 26251.3903 loop_ _Entity_assembly.ID _Entity_assembly.Entity_assembly_name _Entity_assembly.Entity_ID _Entity_assembly.Entity_label _Entity_assembly.Asym_ID _Entity_assembly.PDB_chain_ID _Entity_assembly.Experimental_data_reported _Entity_assembly.Physical_state _Entity_assembly.Conformational_isomer _Entity_assembly.Chemical_exchange_state _Entity_assembly.Magnetic_equivalence_group_code _Entity_assembly.Role _Entity_assembly.Details _Entity_assembly.Entry_ID _Entity_assembly.Assembly_ID 1 'Ubiquitin ISG15 conjugating enzyme E2 L6' 1 $Ubiquitin_ISG15_conjugating_enzyme_E2_L6 A . no . . . . . . rr_2kjh 1 2 Ubiquitin 2 $Ubiquitin B . no . . . . . . rr_2kjh 1 stop_ save_ #################################### # Biological polymers and ligands # #################################### save_Ubiquitin_ISG15_conjugating_enzyme_E2_L6 _Entity.Sf_category entity _Entity.Sf_framecode Ubiquitin_ISG15_conjugating_enzyme_E2_L6 _Entity.Entry_ID rr_2kjh _Entity.ID 1 _Entity.Name Ubiquitin_ISG15_conjugating_enzyme_E2_L6 _Entity.Type polymer _Entity.Polymer_type polypeptide(L) _Entity.Polymer_strand_ID A _Entity.Polymer_seq_one_letter_code ; MASMRVVKELEDLQKKPPPY LRNLSSDDANVLVWHALLLP DQPPYHLKAFNLRISFPPEY PFKPPMIKFTTKIYHPNVDE NGQICLPIISSENWKPCTKT CQVLEALNVLVNRPNIREPL RMDLADLLTQNPELFRKNAE EFTLRFGVDRPS ; _Entity.Ambiguous_conformational_states no _Entity.Ambiguous_chem_comp_sites no _Entity.Nstd_monomer no _Entity.Nstd_chirality no _Entity.Nstd_linkage no _Entity.Number_of_monomers 152 _Entity.Paramagnetic no _Entity.Thiol_state 'all free' _Entity.Parent_entity_ID 1 _Entity.Formula_weight 17640.4837 loop_ _Entity_comp_index.ID _Entity_comp_index.Auth_seq_ID _Entity_comp_index.Comp_ID _Entity_comp_index.Comp_label _Entity_comp_index.Entry_ID _Entity_comp_index.Entity_ID 1 . MET . rr_2kjh 1 2 . ALA . rr_2kjh 1 3 . SER . rr_2kjh 1 4 . MET . rr_2kjh 1 5 . ARG . rr_2kjh 1 6 . VAL . rr_2kjh 1 7 . VAL . rr_2kjh 1 8 . LYS . rr_2kjh 1 9 . GLU . rr_2kjh 1 10 . LEU . rr_2kjh 1 11 . GLU . rr_2kjh 1 12 . ASP . rr_2kjh 1 13 . LEU . rr_2kjh 1 14 . GLN . rr_2kjh 1 15 . LYS . rr_2kjh 1 16 . LYS . rr_2kjh 1 17 . PRO . rr_2kjh 1 18 . PRO . rr_2kjh 1 19 . PRO . rr_2kjh 1 20 . TYR . rr_2kjh 1 21 . LEU . rr_2kjh 1 22 . ARG . rr_2kjh 1 23 . ASN . rr_2kjh 1 24 . LEU . rr_2kjh 1 25 . SER . rr_2kjh 1 26 . SER . rr_2kjh 1 27 . ASP . rr_2kjh 1 28 . ASP . rr_2kjh 1 29 . ALA . rr_2kjh 1 30 . ASN . rr_2kjh 1 31 . VAL . rr_2kjh 1 32 . LEU . rr_2kjh 1 33 . VAL . rr_2kjh 1 34 . TRP . rr_2kjh 1 35 . HIS . rr_2kjh 1 36 . ALA . rr_2kjh 1 37 . LEU . rr_2kjh 1 38 . LEU . rr_2kjh 1 39 . LEU . rr_2kjh 1 40 . PRO . rr_2kjh 1 41 . ASP . rr_2kjh 1 42 . GLN . rr_2kjh 1 43 . PRO . rr_2kjh 1 44 . PRO . rr_2kjh 1 45 . TYR . rr_2kjh 1 46 . HIS . rr_2kjh 1 47 . LEU . rr_2kjh 1 48 . LYS . rr_2kjh 1 49 . ALA . rr_2kjh 1 50 . PHE . rr_2kjh 1 51 . ASN . rr_2kjh 1 52 . LEU . rr_2kjh 1 53 . ARG . rr_2kjh 1 54 . ILE . rr_2kjh 1 55 . SER . rr_2kjh 1 56 . PHE . rr_2kjh 1 57 . PRO . rr_2kjh 1 58 . PRO . rr_2kjh 1 59 . GLU . rr_2kjh 1 60 . TYR . rr_2kjh 1 61 . PRO . rr_2kjh 1 62 . PHE . rr_2kjh 1 63 . LYS . rr_2kjh 1 64 . PRO . rr_2kjh 1 65 . PRO . rr_2kjh 1 66 . MET . rr_2kjh 1 67 . ILE . rr_2kjh 1 68 . LYS . rr_2kjh 1 69 . PHE . rr_2kjh 1 70 . THR . rr_2kjh 1 71 . THR . rr_2kjh 1 72 . LYS . rr_2kjh 1 73 . ILE . rr_2kjh 1 74 . TYR . rr_2kjh 1 75 . HIS . rr_2kjh 1 76 . PRO . rr_2kjh 1 77 . ASN . rr_2kjh 1 78 . VAL . rr_2kjh 1 79 . ASP . rr_2kjh 1 80 . GLU . rr_2kjh 1 81 . ASN . rr_2kjh 1 82 . GLY . rr_2kjh 1 83 . GLN . rr_2kjh 1 84 . ILE . rr_2kjh 1 85 . CYS . rr_2kjh 1 86 . LEU . rr_2kjh 1 87 . PRO . rr_2kjh 1 88 . ILE . rr_2kjh 1 89 . ILE . rr_2kjh 1 90 . SER . rr_2kjh 1 91 . SER . rr_2kjh 1 92 . GLU . rr_2kjh 1 93 . ASN . rr_2kjh 1 94 . TRP . rr_2kjh 1 95 . LYS . rr_2kjh 1 96 . PRO . rr_2kjh 1 97 . CYS . rr_2kjh 1 98 . THR . rr_2kjh 1 99 . LYS . rr_2kjh 1 100 . THR . rr_2kjh 1 101 . CYS . rr_2kjh 1 102 . GLN . rr_2kjh 1 103 . VAL . rr_2kjh 1 104 . LEU . rr_2kjh 1 105 . GLU . rr_2kjh 1 106 . ALA . rr_2kjh 1 107 . LEU . rr_2kjh 1 108 . ASN . rr_2kjh 1 109 . VAL . rr_2kjh 1 110 . LEU . rr_2kjh 1 111 . VAL . rr_2kjh 1 112 . ASN . rr_2kjh 1 113 . ARG . rr_2kjh 1 114 . PRO . rr_2kjh 1 115 . ASN . rr_2kjh 1 116 . ILE . rr_2kjh 1 117 . ARG . rr_2kjh 1 118 . GLU . rr_2kjh 1 119 . PRO . rr_2kjh 1 120 . LEU . rr_2kjh 1 121 . ARG . rr_2kjh 1 122 . MET . rr_2kjh 1 123 . ASP . rr_2kjh 1 124 . LEU . rr_2kjh 1 125 . ALA . rr_2kjh 1 126 . ASP . rr_2kjh 1 127 . LEU . rr_2kjh 1 128 . LEU . rr_2kjh 1 129 . THR . rr_2kjh 1 130 . GLN . rr_2kjh 1 131 . ASN . rr_2kjh 1 132 . PRO . rr_2kjh 1 133 . GLU . rr_2kjh 1 134 . LEU . rr_2kjh 1 135 . PHE . rr_2kjh 1 136 . ARG . rr_2kjh 1 137 . LYS . rr_2kjh 1 138 . ASN . rr_2kjh 1 139 . ALA . rr_2kjh 1 140 . GLU . rr_2kjh 1 141 . GLU . rr_2kjh 1 142 . PHE . rr_2kjh 1 143 . THR . rr_2kjh 1 144 . LEU . rr_2kjh 1 145 . ARG . rr_2kjh 1 146 . PHE . rr_2kjh 1 147 . GLY . rr_2kjh 1 148 . VAL . rr_2kjh 1 149 . ASP . rr_2kjh 1 150 . ARG . rr_2kjh 1 151 . PRO . rr_2kjh 1 152 . SER . rr_2kjh 1 stop_ loop_ _Entity_poly_seq.Hetero _Entity_poly_seq.Mon_ID _Entity_poly_seq.Num _Entity_poly_seq.Comp_index_ID _Entity_poly_seq.Entry_ID _Entity_poly_seq.Entity_ID . MET 1 1 rr_2kjh 1 . ALA 2 2 rr_2kjh 1 . SER 3 3 rr_2kjh 1 . MET 4 4 rr_2kjh 1 . ARG 5 5 rr_2kjh 1 . VAL 6 6 rr_2kjh 1 . VAL 7 7 rr_2kjh 1 . LYS 8 8 rr_2kjh 1 . GLU 9 9 rr_2kjh 1 . LEU 10 10 rr_2kjh 1 . GLU 11 11 rr_2kjh 1 . ASP 12 12 rr_2kjh 1 . LEU 13 13 rr_2kjh 1 . GLN 14 14 rr_2kjh 1 . LYS 15 15 rr_2kjh 1 . LYS 16 16 rr_2kjh 1 . PRO 17 17 rr_2kjh 1 . PRO 18 18 rr_2kjh 1 . PRO 19 19 rr_2kjh 1 . TYR 20 20 rr_2kjh 1 . LEU 21 21 rr_2kjh 1 . ARG 22 22 rr_2kjh 1 . ASN 23 23 rr_2kjh 1 . LEU 24 24 rr_2kjh 1 . SER 25 25 rr_2kjh 1 . SER 26 26 rr_2kjh 1 . ASP 27 27 rr_2kjh 1 . ASP 28 28 rr_2kjh 1 . ALA 29 29 rr_2kjh 1 . ASN 30 30 rr_2kjh 1 . VAL 31 31 rr_2kjh 1 . LEU 32 32 rr_2kjh 1 . VAL 33 33 rr_2kjh 1 . TRP 34 34 rr_2kjh 1 . HIS 35 35 rr_2kjh 1 . ALA 36 36 rr_2kjh 1 . LEU 37 37 rr_2kjh 1 . LEU 38 38 rr_2kjh 1 . LEU 39 39 rr_2kjh 1 . PRO 40 40 rr_2kjh 1 . ASP 41 41 rr_2kjh 1 . GLN 42 42 rr_2kjh 1 . PRO 43 43 rr_2kjh 1 . PRO 44 44 rr_2kjh 1 . TYR 45 45 rr_2kjh 1 . HIS 46 46 rr_2kjh 1 . LEU 47 47 rr_2kjh 1 . LYS 48 48 rr_2kjh 1 . ALA 49 49 rr_2kjh 1 . PHE 50 50 rr_2kjh 1 . ASN 51 51 rr_2kjh 1 . LEU 52 52 rr_2kjh 1 . ARG 53 53 rr_2kjh 1 . ILE 54 54 rr_2kjh 1 . SER 55 55 rr_2kjh 1 . PHE 56 56 rr_2kjh 1 . PRO 57 57 rr_2kjh 1 . PRO 58 58 rr_2kjh 1 . GLU 59 59 rr_2kjh 1 . TYR 60 60 rr_2kjh 1 . PRO 61 61 rr_2kjh 1 . PHE 62 62 rr_2kjh 1 . LYS 63 63 rr_2kjh 1 . PRO 64 64 rr_2kjh 1 . PRO 65 65 rr_2kjh 1 . MET 66 66 rr_2kjh 1 . ILE 67 67 rr_2kjh 1 . LYS 68 68 rr_2kjh 1 . PHE 69 69 rr_2kjh 1 . THR 70 70 rr_2kjh 1 . THR 71 71 rr_2kjh 1 . LYS 72 72 rr_2kjh 1 . ILE 73 73 rr_2kjh 1 . TYR 74 74 rr_2kjh 1 . HIS 75 75 rr_2kjh 1 . PRO 76 76 rr_2kjh 1 . ASN 77 77 rr_2kjh 1 . VAL 78 78 rr_2kjh 1 . ASP 79 79 rr_2kjh 1 . GLU 80 80 rr_2kjh 1 . ASN 81 81 rr_2kjh 1 . GLY 82 82 rr_2kjh 1 . GLN 83 83 rr_2kjh 1 . ILE 84 84 rr_2kjh 1 . CYS 85 85 rr_2kjh 1 . LEU 86 86 rr_2kjh 1 . PRO 87 87 rr_2kjh 1 . ILE 88 88 rr_2kjh 1 . ILE 89 89 rr_2kjh 1 . SER 90 90 rr_2kjh 1 . SER 91 91 rr_2kjh 1 . GLU 92 92 rr_2kjh 1 . ASN 93 93 rr_2kjh 1 . TRP 94 94 rr_2kjh 1 . LYS 95 95 rr_2kjh 1 . PRO 96 96 rr_2kjh 1 . CYS 97 97 rr_2kjh 1 . THR 98 98 rr_2kjh 1 . LYS 99 99 rr_2kjh 1 . THR 100 100 rr_2kjh 1 . CYS 101 101 rr_2kjh 1 . GLN 102 102 rr_2kjh 1 . VAL 103 103 rr_2kjh 1 . LEU 104 104 rr_2kjh 1 . GLU 105 105 rr_2kjh 1 . ALA 106 106 rr_2kjh 1 . LEU 107 107 rr_2kjh 1 . ASN 108 108 rr_2kjh 1 . VAL 109 109 rr_2kjh 1 . LEU 110 110 rr_2kjh 1 . VAL 111 111 rr_2kjh 1 . ASN 112 112 rr_2kjh 1 . ARG 113 113 rr_2kjh 1 . PRO 114 114 rr_2kjh 1 . ASN 115 115 rr_2kjh 1 . ILE 116 116 rr_2kjh 1 . ARG 117 117 rr_2kjh 1 . GLU 118 118 rr_2kjh 1 . PRO 119 119 rr_2kjh 1 . LEU 120 120 rr_2kjh 1 . ARG 121 121 rr_2kjh 1 . MET 122 122 rr_2kjh 1 . ASP 123 123 rr_2kjh 1 . LEU 124 124 rr_2kjh 1 . ALA 125 125 rr_2kjh 1 . ASP 126 126 rr_2kjh 1 . LEU 127 127 rr_2kjh 1 . LEU 128 128 rr_2kjh 1 . THR 129 129 rr_2kjh 1 . GLN 130 130 rr_2kjh 1 . ASN 131 131 rr_2kjh 1 . PRO 132 132 rr_2kjh 1 . GLU 133 133 rr_2kjh 1 . LEU 134 134 rr_2kjh 1 . PHE 135 135 rr_2kjh 1 . ARG 136 136 rr_2kjh 1 . LYS 137 137 rr_2kjh 1 . ASN 138 138 rr_2kjh 1 . ALA 139 139 rr_2kjh 1 . GLU 140 140 rr_2kjh 1 . GLU 141 141 rr_2kjh 1 . PHE 142 142 rr_2kjh 1 . THR 143 143 rr_2kjh 1 . LEU 144 144 rr_2kjh 1 . ARG 145 145 rr_2kjh 1 . PHE 146 146 rr_2kjh 1 . GLY 147 147 rr_2kjh 1 . VAL 148 148 rr_2kjh 1 . ASP 149 149 rr_2kjh 1 . ARG 150 150 rr_2kjh 1 . PRO 151 151 rr_2kjh 1 . SER 152 152 rr_2kjh 1 stop_ save_ save_Ubiquitin _Entity.Sf_category entity _Entity.Sf_framecode Ubiquitin _Entity.Entry_ID rr_2kjh _Entity.ID 2 _Entity.Name Ubiquitin _Entity.Type polymer _Entity.Polymer_type polypeptide(L) _Entity.Polymer_strand_ID B _Entity.Polymer_seq_one_letter_code ; MQIFVKTLTGKTITLEVEPS DTIENVKAKIQDKEGIPPDQ QRLIFAGKQLEDGRTLSDYN IQKESTLHLVLRLRGC ; _Entity.Ambiguous_conformational_states no _Entity.Ambiguous_chem_comp_sites no _Entity.Nstd_monomer no _Entity.Nstd_chirality no _Entity.Nstd_linkage no _Entity.Number_of_monomers 76 _Entity.Paramagnetic no _Entity.Thiol_state 'all free' _Entity.Parent_entity_ID 2 _Entity.Formula_weight 8610.9066 loop_ _Entity_comp_index.ID _Entity_comp_index.Auth_seq_ID _Entity_comp_index.Comp_ID _Entity_comp_index.Comp_label _Entity_comp_index.Entry_ID _Entity_comp_index.Entity_ID 1 . MET . rr_2kjh 2 2 . GLN . rr_2kjh 2 3 . ILE . rr_2kjh 2 4 . PHE . rr_2kjh 2 5 . VAL . rr_2kjh 2 6 . LYS . rr_2kjh 2 7 . THR . rr_2kjh 2 8 . LEU . rr_2kjh 2 9 . THR . rr_2kjh 2 10 . GLY . rr_2kjh 2 11 . LYS . rr_2kjh 2 12 . THR . rr_2kjh 2 13 . ILE . rr_2kjh 2 14 . THR . rr_2kjh 2 15 . LEU . rr_2kjh 2 16 . GLU . rr_2kjh 2 17 . VAL . rr_2kjh 2 18 . GLU . rr_2kjh 2 19 . PRO . rr_2kjh 2 20 . SER . rr_2kjh 2 21 . ASP . rr_2kjh 2 22 . THR . rr_2kjh 2 23 . ILE . rr_2kjh 2 24 . GLU . rr_2kjh 2 25 . ASN . rr_2kjh 2 26 . VAL . rr_2kjh 2 27 . LYS . rr_2kjh 2 28 . ALA . rr_2kjh 2 29 . LYS . rr_2kjh 2 30 . ILE . rr_2kjh 2 31 . GLN . rr_2kjh 2 32 . ASP . rr_2kjh 2 33 . LYS . rr_2kjh 2 34 . GLU . rr_2kjh 2 35 . GLY . rr_2kjh 2 36 . ILE . rr_2kjh 2 37 . PRO . rr_2kjh 2 38 . PRO . rr_2kjh 2 39 . ASP . rr_2kjh 2 40 . GLN . rr_2kjh 2 41 . GLN . rr_2kjh 2 42 . ARG . rr_2kjh 2 43 . LEU . rr_2kjh 2 44 . ILE . rr_2kjh 2 45 . PHE . rr_2kjh 2 46 . ALA . rr_2kjh 2 47 . GLY . rr_2kjh 2 48 . LYS . rr_2kjh 2 49 . GLN . rr_2kjh 2 50 . LEU . rr_2kjh 2 51 . GLU . rr_2kjh 2 52 . ASP . rr_2kjh 2 53 . GLY . rr_2kjh 2 54 . ARG . rr_2kjh 2 55 . THR . rr_2kjh 2 56 . LEU . rr_2kjh 2 57 . SER . rr_2kjh 2 58 . ASP . rr_2kjh 2 59 . TYR . rr_2kjh 2 60 . ASN . rr_2kjh 2 61 . ILE . rr_2kjh 2 62 . GLN . rr_2kjh 2 63 . LYS . rr_2kjh 2 64 . GLU . rr_2kjh 2 65 . SER . rr_2kjh 2 66 . THR . rr_2kjh 2 67 . LEU . rr_2kjh 2 68 . HIS . rr_2kjh 2 69 . LEU . rr_2kjh 2 70 . VAL . rr_2kjh 2 71 . LEU . rr_2kjh 2 72 . ARG . rr_2kjh 2 73 . LEU . rr_2kjh 2 74 . ARG . rr_2kjh 2 75 . GLY . rr_2kjh 2 76 . CYS . rr_2kjh 2 stop_ loop_ _Entity_poly_seq.Hetero _Entity_poly_seq.Mon_ID _Entity_poly_seq.Num _Entity_poly_seq.Comp_index_ID _Entity_poly_seq.Entry_ID _Entity_poly_seq.Entity_ID . MET 1 1 rr_2kjh 2 . GLN 2 2 rr_2kjh 2 . ILE 3 3 rr_2kjh 2 . PHE 4 4 rr_2kjh 2 . VAL 5 5 rr_2kjh 2 . LYS 6 6 rr_2kjh 2 . THR 7 7 rr_2kjh 2 . LEU 8 8 rr_2kjh 2 . THR 9 9 rr_2kjh 2 . GLY 10 10 rr_2kjh 2 . LYS 11 11 rr_2kjh 2 . THR 12 12 rr_2kjh 2 . ILE 13 13 rr_2kjh 2 . THR 14 14 rr_2kjh 2 . LEU 15 15 rr_2kjh 2 . GLU 16 16 rr_2kjh 2 . VAL 17 17 rr_2kjh 2 . GLU 18 18 rr_2kjh 2 . PRO 19 19 rr_2kjh 2 . SER 20 20 rr_2kjh 2 . ASP 21 21 rr_2kjh 2 . THR 22 22 rr_2kjh 2 . ILE 23 23 rr_2kjh 2 . GLU 24 24 rr_2kjh 2 . ASN 25 25 rr_2kjh 2 . VAL 26 26 rr_2kjh 2 . LYS 27 27 rr_2kjh 2 . ALA 28 28 rr_2kjh 2 . LYS 29 29 rr_2kjh 2 . ILE 30 30 rr_2kjh 2 . GLN 31 31 rr_2kjh 2 . ASP 32 32 rr_2kjh 2 . LYS 33 33 rr_2kjh 2 . GLU 34 34 rr_2kjh 2 . GLY 35 35 rr_2kjh 2 . ILE 36 36 rr_2kjh 2 . PRO 37 37 rr_2kjh 2 . PRO 38 38 rr_2kjh 2 . ASP 39 39 rr_2kjh 2 . GLN 40 40 rr_2kjh 2 . GLN 41 41 rr_2kjh 2 . ARG 42 42 rr_2kjh 2 . LEU 43 43 rr_2kjh 2 . ILE 44 44 rr_2kjh 2 . PHE 45 45 rr_2kjh 2 . ALA 46 46 rr_2kjh 2 . GLY 47 47 rr_2kjh 2 . LYS 48 48 rr_2kjh 2 . GLN 49 49 rr_2kjh 2 . LEU 50 50 rr_2kjh 2 . GLU 51 51 rr_2kjh 2 . ASP 52 52 rr_2kjh 2 . GLY 53 53 rr_2kjh 2 . ARG 54 54 rr_2kjh 2 . THR 55 55 rr_2kjh 2 . LEU 56 56 rr_2kjh 2 . SER 57 57 rr_2kjh 2 . ASP 58 58 rr_2kjh 2 . TYR 59 59 rr_2kjh 2 . ASN 60 60 rr_2kjh 2 . ILE 61 61 rr_2kjh 2 . GLN 62 62 rr_2kjh 2 . LYS 63 63 rr_2kjh 2 . GLU 64 64 rr_2kjh 2 . SER 65 65 rr_2kjh 2 . THR 66 66 rr_2kjh 2 . LEU 67 67 rr_2kjh 2 . HIS 68 68 rr_2kjh 2 . LEU 69 69 rr_2kjh 2 . VAL 70 70 rr_2kjh 2 . LEU 71 71 rr_2kjh 2 . ARG 72 72 rr_2kjh 2 . LEU 73 73 rr_2kjh 2 . ARG 74 74 rr_2kjh 2 . GLY 75 75 rr_2kjh 2 . CYS 76 76 rr_2kjh 2 stop_ save_ ############################## # Structure determinations # ############################## ########################## # Conformer statistics # ########################## save_conformer_statistics _Conformer_stat_list.Sf_category conformer_statistics _Conformer_stat_list.Sf_framecode conformer_statistics _Conformer_stat_list.Entry_ID rr_2kjh _Conformer_stat_list.ID 1 _Conformer_stat_list.Conf_family_coord_set_ID 1 _Conformer_stat_list.Conf_family_coord_set_label $Original_constraints_and_structures _Conformer_stat_list.Conformer_submitted_total_num 16 save_ ########################### # Constraint Statistics # ########################### save_constraint_statistics _Constraint_stat_list.Sf_framecode constraint_statistics _Constraint_stat_list.Sf_category constraint_statistics _Constraint_stat_list.Entry_ID rr_2kjh _Constraint_stat_list.ID 1 loop_ _Constraint_file.ID _Constraint_file.Constraint_filename _Constraint_file.Software_ID _Constraint_file.Software_label _Constraint_file.Software_name _Constraint_file.Block_ID _Constraint_file.Constraint_type _Constraint_file.Constraint_subtype _Constraint_file.Constraint_subsubtype _Constraint_file.Constraint_number _Constraint_file.Entry_ID _Constraint_file.Constraint_stat_list_ID 1 2kjh.mr . . 'MR format' 1 comment 'Not applicable' 'Not applicable' 0 rr_2kjh 1 1 2kjh.mr . . HADDOCK 2 distance NOE ambi 0 rr_2kjh 1 1 2kjh.mr . . XPLOR/CNS 3 distance 'disulfide bond' simple 1 rr_2kjh 1 1 2kjh.mr . . 'MR format' 4 'nomenclature mapping' 'Not applicable' 'Not applicable' 0 rr_2kjh 1 stop_ save_ save_CNS/XPLOR_distance_constraints_3 _Gen_dist_constraint_list.Sf_category general_distance_constraints _Gen_dist_constraint_list.Sf_framecode CNS/XPLOR_distance_constraints_3 _Gen_dist_constraint_list.Entry_ID rr_2kjh _Gen_dist_constraint_list.ID 1 _Gen_dist_constraint_list.Constraint_type 'disulfide bond' _Gen_dist_constraint_list.Details 'Generated by Wattos' _Gen_dist_constraint_list.Constraint_file_ID 1 _Gen_dist_constraint_list.Block_ID 3 loop_ _Gen_dist_constraint_software.Software_ID _Gen_dist_constraint_software.Software_label _Gen_dist_constraint_software.Method_ID _Gen_dist_constraint_software.Method_label _Gen_dist_constraint_software.Entry_ID _Gen_dist_constraint_software.Gen_dist_constraint_list_ID . . . . rr_2kjh 1 stop_ loop_ _Gen_dist_constraint.ID _Gen_dist_constraint.Member_ID _Gen_dist_constraint.Member_logic_code _Gen_dist_constraint.Assembly_atom_ID_1 _Gen_dist_constraint.Entity_assembly_ID_1 _Gen_dist_constraint.Entity_ID_1 _Gen_dist_constraint.Comp_index_ID_1 _Gen_dist_constraint.Seq_ID_1 _Gen_dist_constraint.Comp_ID_1 _Gen_dist_constraint.Atom_ID_1 _Gen_dist_constraint.Atom_type_1 _Gen_dist_constraint.Atom_isotope_number_1 _Gen_dist_constraint.Resonance_ID_1 _Gen_dist_constraint.Assembly_atom_ID_2 _Gen_dist_constraint.Entity_assembly_ID_2 _Gen_dist_constraint.Entity_ID_2 _Gen_dist_constraint.Comp_index_ID_2 _Gen_dist_constraint.Seq_ID_2 _Gen_dist_constraint.Comp_ID_2 _Gen_dist_constraint.Atom_ID_2 _Gen_dist_constraint.Atom_type_2 _Gen_dist_constraint.Atom_isotope_number_2 _Gen_dist_constraint.Resonance_ID_2 _Gen_dist_constraint.Intensity_val _Gen_dist_constraint.Intensity_lower_val_err _Gen_dist_constraint.Intensity_upper_val_err _Gen_dist_constraint.Distance_val _Gen_dist_constraint.Distance_lower_bound_val _Gen_dist_constraint.Distance_upper_bound_val _Gen_dist_constraint.Contribution_fractional_val _Gen_dist_constraint.Spectral_peak_ID _Gen_dist_constraint.Spectral_peak_list_ID _Gen_dist_constraint.PDB_record_ID_1 _Gen_dist_constraint.PDB_model_num_1 _Gen_dist_constraint.PDB_strand_ID_1 _Gen_dist_constraint.PDB_ins_code_1 _Gen_dist_constraint.PDB_residue_no_1 _Gen_dist_constraint.PDB_residue_name_1 _Gen_dist_constraint.PDB_atom_name_1 _Gen_dist_constraint.PDB_record_ID_2 _Gen_dist_constraint.PDB_model_num_2 _Gen_dist_constraint.PDB_strand_ID_2 _Gen_dist_constraint.PDB_ins_code_2 _Gen_dist_constraint.PDB_residue_no_2 _Gen_dist_constraint.PDB_residue_name_2 _Gen_dist_constraint.PDB_atom_name_2 _Gen_dist_constraint.Auth_entity_assembly_ID_1 _Gen_dist_constraint.Auth_asym_ID_1 _Gen_dist_constraint.Auth_chain_ID_1 _Gen_dist_constraint.Auth_seq_ID_1 _Gen_dist_constraint.Auth_comp_ID_1 _Gen_dist_constraint.Auth_atom_ID_1 _Gen_dist_constraint.Auth_alt_ID_1 _Gen_dist_constraint.Auth_atom_name_1 _Gen_dist_constraint.Auth_entity_assembly_ID_2 _Gen_dist_constraint.Auth_asym_ID_2 _Gen_dist_constraint.Auth_chain_ID_2 _Gen_dist_constraint.Auth_seq_ID_2 _Gen_dist_constraint.Auth_comp_ID_2 _Gen_dist_constraint.Auth_atom_ID_2 _Gen_dist_constraint.Auth_alt_ID_2 _Gen_dist_constraint.Auth_atom_name_2 _Gen_dist_constraint.Entry_ID _Gen_dist_constraint.Gen_dist_constraint_list_ID 1 1 . . 1 1 85 85 CYS SG S . . . 2 2 76 76 CYS SG S . . . . . 3.0 0.5 3.0 . . . . . A . 85 CYS SG . . B . 76 CYS SG . A . 85 . SG . . . B . 76 . SG . . rr_2kjh 1 stop_ loop_ _Gen_dist_constraint_comment_org.ID _Gen_dist_constraint_comment_org.Comment_text _Gen_dist_constraint_comment_org.Comment_begin_line _Gen_dist_constraint_comment_org.Comment_begin_column _Gen_dist_constraint_comment_org.Comment_end_line _Gen_dist_constraint_comment_org.Comment_end_column _Gen_dist_constraint_comment_org.Entry_ID _Gen_dist_constraint_comment_org.Gen_dist_constraint_list_ID 1 'Unambiguous interaction restraint for disulfide bond between A and B' 1 1 1 72 rr_2kjh 1 stop_ save_ save_MR_file_comment_1 _Org_constr_file_comment.Sf_framecode MR_file_comment_1 _Org_constr_file_comment.Sf_category org_constr_file_comment _Org_constr_file_comment.Entry_ID rr_2kjh _Org_constr_file_comment.ID 1 _Org_constr_file_comment.Constraint_file_ID 1 _Org_constr_file_comment.Block_ID 1 _Org_constr_file_comment.Details 'Generated by Wattos' _Org_constr_file_comment.Comment '*HEADER LIGASE/PROTEIN BINDING 28-MAY-09 2KJH *TITLE NMR BASED STRUCTURAL MODEL OF THE UBCH8-UBIQUITIN COMPLEX *COMPND MOL_ID: 1; *COMPND 2 MOLECULE: UBIQUITIN/ISG15-CONJUGATING ENZYME E2 L6; *COMPND 3 CHAIN: A; *COMPND 4 SYNONYM: UBIQUITIN-PROTEIN LIGASE L6, UBIQUITIN CARRIER *COMPND 5 PROTEIN L6, UBCH8, RETINOIC ACID-INDUCED GENE B PROTEIN, *COMPND 6 RIG-B; *COMPND 7 EC: 6.3.2.19; *COMPND 8 ENGINEERED: YES; *COMPND 9 MOL_ID: 2; *COMPND 10 MOLECULE: UBIQUITIN; *COMPND 11 CHAIN: B; *COMPND 12 ENGINEERED: YES; *COMPND 13 MUTATION: YES *SOURCE MOL_ID: 1; *SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; *SOURCE 3 ORGANISM_COMMON: HUMAN; *SOURCE 4 ORGANISM_TAXID: 9606; *SOURCE 5 GENE: UBE2L6, UBCH8; *SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; *SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; *SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); *SOURCE 9 EXPRESSION_SYSTEM_VECTOR: P11; *SOURCE 10 MOL_ID: 2; *SOURCE 11 ORGANISM_SCIENTIFIC: HOMO SAPIENS; *SOURCE 12 ORGANISM_COMMON: HUMAN; *SOURCE 13 ORGANISM_TAXID: 9606; *SOURCE 14 GENE: RPS27A UBA80, UBCEP1, UBA52, UBB, UBC; *SOURCE 15 EXPRESSION_SYSTEM: ESCHERICHIA COLI; *SOURCE 16 EXPRESSION_SYSTEM_TAXID: 562; *SOURCE 17 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)PLYSS; *SOURCE 18 EXPRESSION_SYSTEM_VECTOR: PET3A *KEYWDS PROTEIN-PROTEIN INTERACTION, HADDOCK MODEL, E2 ENZYME, ATP- *KEYWDS 2 BINDING, LIGASE, NUCLEOTIDE-BINDING, UBL CONJUGATION *KEYWDS 3 PATHWAY, CYTOPLASM, ISOPEPTIDE BOND, NUCLEUS, UBL *KEYWDS 4 CONJUGATION, LIGASE/PROTEIN BINDING COMPLEX *EXPDTA SOLUTION NMR *NUMMDL 16 *AUTHOR S.A.SERNIWKA, G.S.SHAW *REVDAT 1 08-DEC-09 2KJH 0' save_