data_wwPDB_remediated_restraints_file_for_PDB_entry_1ie5 # This wwPDB archive file contains, for PDB entry 1ie5: # # - Sequence information from the PDB mmCIF file # - NMR restraints from the PDB MR file # # In this file, the NMR restraints share the same atom names as in the coordinate # file, and in this way can differ from the data deposited at the wwPDB. To achieve # this aim, the NMR restraints were parsed from their original format files, and # the coordinates and NMR restraints information were subsequently harmonized. # # Due to the complexity of this harmonization process, minor modifications could # have occurred to the NMR restraints information, or data could have been lost # because of parsing or conversion errors. The PDB file remains the # authoritative reference for the atomic coordinates and the originally deposited # restraints files remain the primary reference for these data. # # This file is generated as part of the wwPDB at the BioMagResBank (BMRB) in # collaboration with the PDBe (formerly MSD) group at the European # Bioinformatics Institute (EBI) and the CMBI/IMM group at the Radboud # University of Nijmegen. # # Several software packages were used to produce this file: # # - Wattos (BMRB and CMBI/IMM). # - FormatConverter and NMRStarExport (PDBe). # - CCPN framework (http://www.ccpn.ac.uk/). # # More information about this process can be found in the references below. # Please cite the original reference for this PDB entry. # # JF Doreleijers, A Nederveen, W Vranken, J Lin, AM Bonvin, R Kaptein, JL # Markley, and EL Ulrich (2005). BioMagResBank databases DOCR and FRED # containing converted and filtered sets of experimental NMR restraints and # coordinates from over 500 protein PDB structures. J. Biomol. NMR 32, 1-12. # # WF Vranken, W Boucher, TJ Stevens, RH Fogh, A Pajon, M Llinas, EL Ulrich, JL # Markley, J Ionides, ED Laue (2005). The CCPN data model for NMR spectroscopy: # development of a software pipeline. Proteins 59, 687-696. # # JF Doreleijers, WF Vranken, C Schulte, J Lin, JR Wedell, CJ Penkett, GW Vuister, # G Vriend, JL Markley, and EL Ulrich (2009). The NMR Restraints Grid at BMRB for # 5,266 Protein and Nucleic Acid PDB Entries. J Biomol. NMR 45, 389–396. save_entry_information _Entry.Sf_category entry_information _Entry.Sf_framecode entry_information _Entry.ID rr_1ie5 _Entry.Title "wwPDB remediated NMR restraints for PDB entry 1ie5" _Entry.NMR_STAR_version 3.1 _Entry.Experimental_method NMR _Entry.Experimental_method_subtype solution _Entry.Details "Contains the remediated restraint lists and coordinates for PDB entry 1ie5" save_ save_assembly _Assembly.Sf_category assembly _Assembly.Sf_framecode assembly _Assembly.Entry_ID rr_1ie5 _Assembly.ID 1 _Assembly.Name 1ie5 _Assembly.Number_of_components 1 _Assembly.Organic_ligands 0 _Assembly.Metal_ions 0 _Assembly.Non_standard_bonds no _Assembly.Paramagnetic no _Assembly.Thiol_state "all free" _Assembly.Molecular_mass 11828.0117 loop_ _Entity_assembly.ID _Entity_assembly.Entity_assembly_name _Entity_assembly.Entity_ID _Entity_assembly.Entity_label _Entity_assembly.Asym_ID _Entity_assembly.PDB_chain_ID _Entity_assembly.Experimental_data_reported _Entity_assembly.Physical_state _Entity_assembly.Conformational_isomer _Entity_assembly.Chemical_exchange_state _Entity_assembly.Magnetic_equivalence_group_code _Entity_assembly.Role _Entity_assembly.Details _Entity_assembly.Entry_ID _Entity_assembly.Assembly_ID 1 "NEURAL CELL ADHESION MOLECULE" 1 $NEURAL_CELL_ADHESION_MOLECULE A . no . . . . . . rr_1ie5 1 stop_ save_ save_NEURAL_CELL_ADHESION_MOLECULE _Entity.Sf_category entity _Entity.Sf_framecode NEURAL_CELL_ADHESION_MOLECULE _Entity.Entry_ID rr_1ie5 _Entity.ID 1 _Entity.Name NEURAL_CELL_ADHESION_MOLECULE _Entity.Type polymer _Entity.Polymer_type polypeptide(L) _Entity.Polymer_strand_ID A _Entity.Polymer_seq_one_letter_code ; GKDIQVIVNVPPSVRARQST MNATANLSQSVTLACDADGF PEPTMTWTKDGEPIEQEDNE EKYSFNYDGSELIIKKVDKS DEAEYICIAENKAGEQDATI HLKVFAK ; _Entity.Ambiguous_conformational_states no _Entity.Ambiguous_chem_comp_sites no _Entity.Nstd_monomer no _Entity.Nstd_chirality no _Entity.Nstd_linkage no _Entity.Number_of_monomers 107 _Entity.Paramagnetic no _Entity.Thiol_state "all free" _Entity.Parent_entity_ID 1 _Entity.Formula_weight 11828.0117 loop_ _Entity_comp_index.ID _Entity_comp_index.Auth_seq_ID _Entity_comp_index.Comp_ID _Entity_comp_index.Comp_label _Entity_comp_index.Entry_ID _Entity_comp_index.Entity_ID 1 . GLY . rr_1ie5 1 2 . LYS . rr_1ie5 1 3 . ASP . rr_1ie5 1 4 . ILE . rr_1ie5 1 5 . GLN . rr_1ie5 1 6 . VAL . rr_1ie5 1 7 . ILE . rr_1ie5 1 8 . VAL . rr_1ie5 1 9 . ASN . rr_1ie5 1 10 . VAL . rr_1ie5 1 11 . PRO . rr_1ie5 1 12 . PRO . rr_1ie5 1 13 . SER . rr_1ie5 1 14 . VAL . rr_1ie5 1 15 . ARG . rr_1ie5 1 16 . ALA . rr_1ie5 1 17 . ARG . rr_1ie5 1 18 . GLN . rr_1ie5 1 19 . SER . rr_1ie5 1 20 . THR . rr_1ie5 1 21 . MET . rr_1ie5 1 22 . ASN . rr_1ie5 1 23 . ALA . rr_1ie5 1 24 . THR . rr_1ie5 1 25 . ALA . rr_1ie5 1 26 . ASN . rr_1ie5 1 27 . LEU . rr_1ie5 1 28 . SER . rr_1ie5 1 29 . GLN . rr_1ie5 1 30 . SER . rr_1ie5 1 31 . VAL . rr_1ie5 1 32 . THR . rr_1ie5 1 33 . LEU . rr_1ie5 1 34 . ALA . rr_1ie5 1 35 . CYS . rr_1ie5 1 36 . ASP . rr_1ie5 1 37 . ALA . rr_1ie5 1 38 . ASP . rr_1ie5 1 39 . GLY . rr_1ie5 1 40 . PHE . rr_1ie5 1 41 . PRO . rr_1ie5 1 42 . GLU . rr_1ie5 1 43 . PRO . rr_1ie5 1 44 . THR . rr_1ie5 1 45 . MET . rr_1ie5 1 46 . THR . rr_1ie5 1 47 . TRP . rr_1ie5 1 48 . THR . rr_1ie5 1 49 . LYS . rr_1ie5 1 50 . ASP . rr_1ie5 1 51 . GLY . rr_1ie5 1 52 . GLU . rr_1ie5 1 53 . PRO . rr_1ie5 1 54 . ILE . rr_1ie5 1 55 . GLU . rr_1ie5 1 56 . GLN . rr_1ie5 1 57 . GLU . rr_1ie5 1 58 . ASP . rr_1ie5 1 59 . ASN . rr_1ie5 1 60 . GLU . rr_1ie5 1 61 . GLU . rr_1ie5 1 62 . LYS . rr_1ie5 1 63 . TYR . rr_1ie5 1 64 . SER . rr_1ie5 1 65 . PHE . rr_1ie5 1 66 . ASN . rr_1ie5 1 67 . TYR . rr_1ie5 1 68 . ASP . rr_1ie5 1 69 . GLY . rr_1ie5 1 70 . SER . rr_1ie5 1 71 . GLU . rr_1ie5 1 72 . LEU . rr_1ie5 1 73 . ILE . rr_1ie5 1 74 . ILE . rr_1ie5 1 75 . LYS . rr_1ie5 1 76 . LYS . rr_1ie5 1 77 . VAL . rr_1ie5 1 78 . ASP . rr_1ie5 1 79 . LYS . rr_1ie5 1 80 . SER . rr_1ie5 1 81 . ASP . rr_1ie5 1 82 . GLU . rr_1ie5 1 83 . ALA . rr_1ie5 1 84 . GLU . rr_1ie5 1 85 . TYR . rr_1ie5 1 86 . ILE . rr_1ie5 1 87 . CYS . rr_1ie5 1 88 . ILE . rr_1ie5 1 89 . ALA . rr_1ie5 1 90 . GLU . rr_1ie5 1 91 . ASN . rr_1ie5 1 92 . LYS . rr_1ie5 1 93 . ALA . rr_1ie5 1 94 . GLY . rr_1ie5 1 95 . GLU . rr_1ie5 1 96 . GLN . rr_1ie5 1 97 . ASP . rr_1ie5 1 98 . ALA . rr_1ie5 1 99 . THR . rr_1ie5 1 100 . ILE . rr_1ie5 1 101 . HIS . rr_1ie5 1 102 . LEU . rr_1ie5 1 103 . LYS . rr_1ie5 1 104 . VAL . rr_1ie5 1 105 . PHE . rr_1ie5 1 106 . ALA . rr_1ie5 1 107 . LYS . rr_1ie5 1 stop_ loop_ _Entity_poly_seq.Hetero _Entity_poly_seq.Mon_ID _Entity_poly_seq.Num _Entity_poly_seq.Comp_index_ID _Entity_poly_seq.Entry_ID _Entity_poly_seq.Entity_ID . GLY 1 1 rr_1ie5 1 . LYS 2 2 rr_1ie5 1 . ASP 3 3 rr_1ie5 1 . ILE 4 4 rr_1ie5 1 . GLN 5 5 rr_1ie5 1 . VAL 6 6 rr_1ie5 1 . ILE 7 7 rr_1ie5 1 . VAL 8 8 rr_1ie5 1 . ASN 9 9 rr_1ie5 1 . VAL 10 10 rr_1ie5 1 . PRO 11 11 rr_1ie5 1 . PRO 12 12 rr_1ie5 1 . SER 13 13 rr_1ie5 1 . VAL 14 14 rr_1ie5 1 . ARG 15 15 rr_1ie5 1 . ALA 16 16 rr_1ie5 1 . ARG 17 17 rr_1ie5 1 . GLN 18 18 rr_1ie5 1 . SER 19 19 rr_1ie5 1 . THR 20 20 rr_1ie5 1 . MET 21 21 rr_1ie5 1 . ASN 22 22 rr_1ie5 1 . ALA 23 23 rr_1ie5 1 . THR 24 24 rr_1ie5 1 . ALA 25 25 rr_1ie5 1 . ASN 26 26 rr_1ie5 1 . LEU 27 27 rr_1ie5 1 . SER 28 28 rr_1ie5 1 . GLN 29 29 rr_1ie5 1 . SER 30 30 rr_1ie5 1 . VAL 31 31 rr_1ie5 1 . THR 32 32 rr_1ie5 1 . LEU 33 33 rr_1ie5 1 . ALA 34 34 rr_1ie5 1 . CYS 35 35 rr_1ie5 1 . ASP 36 36 rr_1ie5 1 . ALA 37 37 rr_1ie5 1 . ASP 38 38 rr_1ie5 1 . GLY 39 39 rr_1ie5 1 . PHE 40 40 rr_1ie5 1 . PRO 41 41 rr_1ie5 1 . GLU 42 42 rr_1ie5 1 . PRO 43 43 rr_1ie5 1 . THR 44 44 rr_1ie5 1 . MET 45 45 rr_1ie5 1 . THR 46 46 rr_1ie5 1 . TRP 47 47 rr_1ie5 1 . THR 48 48 rr_1ie5 1 . LYS 49 49 rr_1ie5 1 . ASP 50 50 rr_1ie5 1 . GLY 51 51 rr_1ie5 1 . GLU 52 52 rr_1ie5 1 . PRO 53 53 rr_1ie5 1 . ILE 54 54 rr_1ie5 1 . GLU 55 55 rr_1ie5 1 . GLN 56 56 rr_1ie5 1 . GLU 57 57 rr_1ie5 1 . ASP 58 58 rr_1ie5 1 . ASN 59 59 rr_1ie5 1 . GLU 60 60 rr_1ie5 1 . GLU 61 61 rr_1ie5 1 . LYS 62 62 rr_1ie5 1 . TYR 63 63 rr_1ie5 1 . SER 64 64 rr_1ie5 1 . PHE 65 65 rr_1ie5 1 . ASN 66 66 rr_1ie5 1 . TYR 67 67 rr_1ie5 1 . ASP 68 68 rr_1ie5 1 . GLY 69 69 rr_1ie5 1 . SER 70 70 rr_1ie5 1 . GLU 71 71 rr_1ie5 1 . LEU 72 72 rr_1ie5 1 . ILE 73 73 rr_1ie5 1 . ILE 74 74 rr_1ie5 1 . LYS 75 75 rr_1ie5 1 . LYS 76 76 rr_1ie5 1 . VAL 77 77 rr_1ie5 1 . ASP 78 78 rr_1ie5 1 . LYS 79 79 rr_1ie5 1 . SER 80 80 rr_1ie5 1 . ASP 81 81 rr_1ie5 1 . GLU 82 82 rr_1ie5 1 . ALA 83 83 rr_1ie5 1 . GLU 84 84 rr_1ie5 1 . TYR 85 85 rr_1ie5 1 . ILE 86 86 rr_1ie5 1 . CYS 87 87 rr_1ie5 1 . ILE 88 88 rr_1ie5 1 . ALA 89 89 rr_1ie5 1 . GLU 90 90 rr_1ie5 1 . ASN 91 91 rr_1ie5 1 . LYS 92 92 rr_1ie5 1 . ALA 93 93 rr_1ie5 1 . GLY 94 94 rr_1ie5 1 . GLU 95 95 rr_1ie5 1 . GLN 96 96 rr_1ie5 1 . ASP 97 97 rr_1ie5 1 . ALA 98 98 rr_1ie5 1 . THR 99 99 rr_1ie5 1 . ILE 100 100 rr_1ie5 1 . HIS 101 101 rr_1ie5 1 . LEU 102 102 rr_1ie5 1 . LYS 103 103 rr_1ie5 1 . VAL 104 104 rr_1ie5 1 . PHE 105 105 rr_1ie5 1 . ALA 106 106 rr_1ie5 1 . LYS 107 107 rr_1ie5 1 stop_ save_ save_conformer_statistics _Conformer_stat_list.Sf_category conformer_statistics _Conformer_stat_list.Sf_framecode conformer_statistics _Conformer_stat_list.Entry_ID rr_1ie5 _Conformer_stat_list.ID 1 _Conformer_stat_list.Conf_family_coord_set_ID 1 _Conformer_stat_list.Conf_family_coord_set_label $Original_constraints_and_structures _Conformer_stat_list.Conformer_submitted_total_num 20 save_ save_global_Org_file_characteristics _Constraint_stat_list.Sf_framecode global_Org_file_characteristics _Constraint_stat_list.Sf_category constraint_statistics _Constraint_stat_list.Entry_ID rr_1ie5 _Constraint_stat_list.ID 1 loop_ _Constraint_file.ID _Constraint_file.Constraint_filename _Constraint_file.Software_ID _Constraint_file.Software_label _Constraint_file.Software_name _Constraint_file.Block_ID _Constraint_file.Constraint_type _Constraint_file.Constraint_subtype _Constraint_file.Constraint_subsubtype _Constraint_file.Constraint_number _Constraint_file.Entry_ID _Constraint_file.Constraint_stat_list_ID 1 1ie5.mr . . "MR format" 1 comment "Not applicable" "Not applicable" 0 rr_1ie5 1 1 1ie5.mr . . AMBER 2 distance NOE simple 0 rr_1ie5 1 1 1ie5.mr . . AMBER 3 stereochemistry chirality "Not applicable" 0 rr_1ie5 1 1 1ie5.mr . . AMBER 4 "dihedral angle" "Not applicable" "Not applicable" 0 rr_1ie5 1 1 1ie5.mr . . "MR format" 5 "nomenclature mapping" "Not applicable" "Not applicable" 0 rr_1ie5 1 stop_ save_ save_MR_file_comment_1 _Org_constr_file_comment.Sf_framecode MR_file_comment_1 _Org_constr_file_comment.Sf_category org_constr_file_comment _Org_constr_file_comment.Entry_ID rr_1ie5 _Org_constr_file_comment.ID 1 _Org_constr_file_comment.Constraint_file_ID 1 _Org_constr_file_comment.Block_ID 1 _Org_constr_file_comment.Details "Generated by Wattos" _Org_constr_file_comment.Comment ; *HEADER CELL ADHESION 06-APR-01 1IE5 *TITLE NMR STRUCTURE OF THE THIRD IMMUNOGLOBULIN DOMAIN FROM THE *TITLE 2 NEURAL CELL ADHESION MOLECULE. *COMPND MOL_ID: 1; *COMPND 2 MOLECULE: NEURAL CELL ADHESION MOLECULE; *COMPND 3 CHAIN: A; *COMPND 4 FRAGMENT: THIRD IMMUNOGLOBULIN DOMAIN, RESIDUES 183-288; *COMPND 5 SYNONYM: N-CAM; *COMPND 6 ENGINEERED: YES *SOURCE MOL_ID: 1; *SOURCE 2 ORGANISM_SCIENTIFIC: GALLUS GALLUS; *SOURCE 3 ORGANISM_COMMON: CHICKEN; *SOURCE 4 ORGAN: BRAIN; *SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; *SOURCE 6 EXPRESSION_SYSTEM_COMMON: BACTERIA; *SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); *SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; *SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET3D *KEYWDS INTERMEDIATE IMMUNOGLOBULIN FOLD *EXPDTA NMR, 20 STRUCTURES *AUTHOR A.R.ATKINS, J.CHUNG, S.DEECHONGKIT, E.B.LITTLE, G.M.EDELMAN, *AUTHOR 2 P.E.WRIGHT, B.A.CUNNINGHAM, H.J.DYSON *REVDAT 1 08-AUG-01 1IE5 0 # ; save_