data_6D4L # _entry.id 6D4L # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.379 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 6D4L pdb_00006d4l 10.2210/pdb6d4l/pdb WWPDB D_1000233967 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 6D4L _pdbx_database_status.recvd_initial_deposition_date 2018-04-18 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Kovalevsky, A.' 1 ? 'Huang, Z.' 2 ? 'Vandavasi, V.G.' 3 ? # loop_ _citation.abstract _citation.abstract_id_CAS _citation.book_id_ISBN _citation.book_publisher _citation.book_publisher_city _citation.book_title _citation.coordinate_linkage _citation.country _citation.database_id_Medline _citation.details _citation.id _citation.journal_abbrev _citation.journal_id_ASTM _citation.journal_id_CSD _citation.journal_id_ISSN _citation.journal_full _citation.journal_issue _citation.journal_volume _citation.language _citation.page_first _citation.page_last _citation.title _citation.year _citation.database_id_CSD _citation.pdbx_database_id_DOI _citation.pdbx_database_id_PubMed _citation.unpublished_flag ? ? ? ? ? ? ? UK ? ? primary Structure STRUE6 2005 1878-4186 ? ? 26 ? 1645 ? 'Temperature-Induced Replacement of Phosphate Proton with Metal Ion Captured in Neutron Structures of A-DNA.' 2018 ? 10.1016/j.str.2018.08.001 30244969 ? ? ? ? ? ? ? ? US ? ? 1 'Acta Crystallogr. D Biol. Crystallogr.' ABCRE6 ? 1399-0047 ? ? 65 ? 567 573 'Generalized X-ray and neutron crystallographic analysis: more accurate and complete structures for biological macromolecules.' 2009 ? 10.1107/S0907444909011548 19465771 ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Vandavasi, V.G.' 1 ? primary 'Blakeley, M.P.' 2 ? primary 'Keen, D.A.' 3 ? primary 'Hu, L.R.' 4 ? primary 'Huang, Z.' 5 ? primary 'Kovalevsky, A.' 6 ? 1 'Adams, P.D.' 7 ? 1 'Mustyakimov, M.' 8 ? 1 'Afonine, P.V.' 9 ? 1 'Langan, P.' 10 ? # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 6D4L _cell.details ? _cell.formula_units_Z ? _cell.length_a 42.695 _cell.length_a_esd ? _cell.length_b 42.695 _cell.length_b_esd ? _cell.length_c 24.410 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 8 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6D4L _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn ;DNA (5'-D(*GP*TP*GP*GP*(CSL)P*CP*AP*C)-3') ; 2520.592 1 ? ? ? ? 2 non-polymer syn 'MAGNESIUM ION' 24.305 1 ? ? ? ? 3 water nat water 18.015 29 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type polydeoxyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code '(DG)(DT)(DG)(DG)(CSL)(DC)(DA)(DC)' _entity_poly.pdbx_seq_one_letter_code_can GTGGCCAC _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DG n 1 2 DT n 1 3 DG n 1 4 DG n 1 5 CSL n 1 6 DC n 1 7 DA n 1 8 DC n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 8 _pdbx_entity_src_syn.organism_scientific 'synthetic construct' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 32630 _pdbx_entity_src_syn.details ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 6D4L _struct_ref.pdbx_db_accession 6D4L _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin 1 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 6D4L _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 8 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 6D4L _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 8 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 8 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight CSL 'DNA linking' n "(D)-2'-METHYLSELENYL-2'-DEOXYCYTIDINE-5'-PHOSPHATE" "(D)-2'-DEOXY-2'-SE-METHYLCYTIDINE-5'-PHOSPHATE" 'C10 H16 N3 O7 P Se' 400.184 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DOD non-polymer . 'DEUTERATED WATER' ? 'D2 O' 20.028 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 # loop_ _exptl.absorpt_coefficient_mu _exptl.absorpt_correction_T_max _exptl.absorpt_correction_T_min _exptl.absorpt_correction_type _exptl.absorpt_process_details _exptl.entry_id _exptl.crystals_number _exptl.details _exptl.method _exptl.method_details ? ? ? ? ? 6D4L 1 ? 'X-RAY DIFFRACTION' ? ? ? ? ? ? 6D4L 1 ? 'NEUTRON DIFFRACTION' ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.15 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 42.87 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 5.6 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 303 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '0.1 M magnesium acetate, 30% MPD, 0.1 M MES' _exptl_crystal_grow.pdbx_pH_range ? # loop_ _diffrn.ambient_environment _diffrn.ambient_temp _diffrn.ambient_temp_details _diffrn.ambient_temp_esd _diffrn.crystal_id _diffrn.crystal_support _diffrn.crystal_treatment _diffrn.details _diffrn.id _diffrn.ambient_pressure _diffrn.ambient_pressure_esd _diffrn.ambient_pressure_gt _diffrn.ambient_pressure_lt _diffrn.ambient_temp_gt _diffrn.ambient_temp_lt ? 293 ? ? 1 ? ? ? 1 ? ? ? ? ? ? ? 293 ? ? 1 ? ? ? 2 ? ? ? ? ? ? # loop_ _diffrn_detector.details _diffrn_detector.detector _diffrn_detector.diffrn_id _diffrn_detector.type _diffrn_detector.area_resol_mean _diffrn_detector.dtime _diffrn_detector.pdbx_frames_total _diffrn_detector.pdbx_collection_time_total _diffrn_detector.pdbx_collection_date 'osmic varimax' 'IMAGE PLATE' 1 'RIGAKU RAXIS IV++' ? ? ? ? 2015-01-22 collimators 'IMAGE PLATE' 2 'LADI III' ? ? ? ? 2015-08-15 # loop_ _diffrn_radiation.collimation _diffrn_radiation.diffrn_id _diffrn_radiation.filter_edge _diffrn_radiation.inhomogeneity _diffrn_radiation.monochromator _diffrn_radiation.polarisn_norm _diffrn_radiation.polarisn_ratio _diffrn_radiation.probe _diffrn_radiation.type _diffrn_radiation.xray_symbol _diffrn_radiation.wavelength_id _diffrn_radiation.pdbx_monochromatic_or_laue_m_l _diffrn_radiation.pdbx_wavelength_list _diffrn_radiation.pdbx_wavelength _diffrn_radiation.pdbx_diffrn_protocol _diffrn_radiation.pdbx_analyzer _diffrn_radiation.pdbx_scattering_type ? 1 ? ? ? ? ? ? ? ? 1 M ? ? 'SINGLE WAVELENGTH' ? x-ray ? 2 ? ? ? ? ? ? ? ? 2 L ? ? LAUE ? neutron # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 1.54 1.0 2 2.8 1.0 3 4.0 1.0 # loop_ _diffrn_source.current _diffrn_source.details _diffrn_source.diffrn_id _diffrn_source.power _diffrn_source.size _diffrn_source.source _diffrn_source.target _diffrn_source.type _diffrn_source.voltage _diffrn_source.take-off_angle _diffrn_source.pdbx_wavelength_list _diffrn_source.pdbx_wavelength _diffrn_source.pdbx_synchrotron_beamline _diffrn_source.pdbx_synchrotron_site ? ? 1 ? ? 'ROTATING ANODE' ? 'RIGAKU MICROMAX-007 HF' ? ? 1.54 ? ? ? ? ? 2 ? ? 'NUCLEAR REACTOR' ? 'ILL BEAMLINE LADI III' ? ? 2.8-4.0 ? 'LADI III' ILL # loop_ _reflns.entry_id _reflns.d_resolution_high _reflns.d_resolution_low _reflns.number_obs _reflns.percent_possible_obs _reflns.pdbx_redundancy _reflns.pdbx_Rmerge_I_obs _reflns.pdbx_netI_over_sigmaI _reflns.pdbx_diffrn_id _reflns.pdbx_ordinal _reflns.number_all _reflns.observed_criterion_sigma_F _reflns.observed_criterion_sigma_I _reflns.pdbx_Rsym_value _reflns.pdbx_CC_half _reflns.pdbx_Rpim_I_all _reflns.pdbx_Rrim_I_all _reflns.B_iso_Wilson_estimate 6D4L 1.56 40 3414 96.8 6.7 0.033 45.8 1 1 ? ? ? ? ? ? ? ? 6D4L 2.00 20 1257 74.2 5.6 0.176 7.70 2 2 ? ? ? ? ? ? ? ? # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.percent_possible_all _reflns_shell.Rmerge_I_obs _reflns_shell.pdbx_redundancy _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id _reflns_shell.number_measured_obs _reflns_shell.number_unique_all _reflns_shell.number_unique_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_CC_half _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_Rrim_I_all _reflns_shell.meanI_over_sigI_obs 1.56 1.62 76.8 0.417 3.3 2.10 1 1 ? ? ? ? ? ? ? ? 2.00 2.11 58.1 0.289 2.8 3.50 2 2 ? ? ? ? ? ? ? ? # loop_ _refine.aniso_B[1][1] _refine.aniso_B[1][2] _refine.aniso_B[1][3] _refine.aniso_B[2][2] _refine.aniso_B[2][3] _refine.aniso_B[3][3] _refine.B_iso_max _refine.B_iso_mean _refine.B_iso_min _refine.correlation_coeff_Fo_to_Fc _refine.correlation_coeff_Fo_to_Fc_free _refine.details _refine.diff_density_max _refine.diff_density_max_esd _refine.diff_density_min _refine.diff_density_min_esd _refine.diff_density_rms _refine.diff_density_rms_esd _refine.entry_id _refine.pdbx_refine_id _refine.ls_abs_structure_details _refine.ls_abs_structure_Flack _refine.ls_abs_structure_Flack_esd _refine.ls_abs_structure_Rogers _refine.ls_abs_structure_Rogers_esd _refine.ls_d_res_high _refine.ls_d_res_low _refine.ls_extinction_coef _refine.ls_extinction_coef_esd _refine.ls_extinction_expression _refine.ls_extinction_method _refine.ls_goodness_of_fit_all _refine.ls_goodness_of_fit_all_esd _refine.ls_goodness_of_fit_obs _refine.ls_goodness_of_fit_obs_esd _refine.ls_hydrogen_treatment _refine.ls_matrix_type _refine.ls_number_constraints _refine.ls_number_parameters _refine.ls_number_reflns_all _refine.ls_number_reflns_obs _refine.ls_number_reflns_R_free _refine.ls_number_reflns_R_work _refine.ls_number_restraints _refine.ls_percent_reflns_obs _refine.ls_percent_reflns_R_free _refine.ls_R_factor_all _refine.ls_R_factor_obs _refine.ls_R_factor_R_free _refine.ls_R_factor_R_free_error _refine.ls_R_factor_R_free_error_details _refine.ls_R_factor_R_work _refine.ls_R_Fsqd_factor_obs _refine.ls_R_I_factor_obs _refine.ls_redundancy_reflns_all _refine.ls_redundancy_reflns_obs _refine.ls_restrained_S_all _refine.ls_restrained_S_obs _refine.ls_shift_over_esd_max _refine.ls_shift_over_esd_mean _refine.ls_structure_factor_coef _refine.ls_weighting_details _refine.ls_weighting_scheme _refine.ls_wR_factor_all _refine.ls_wR_factor_obs _refine.ls_wR_factor_R_free _refine.ls_wR_factor_R_work _refine.occupancy_max _refine.occupancy_min _refine.solvent_model_details _refine.solvent_model_param_bsol _refine.solvent_model_param_ksol _refine.ls_R_factor_gt _refine.ls_goodness_of_fit_gt _refine.ls_goodness_of_fit_ref _refine.ls_shift_over_su_max _refine.ls_shift_over_su_max_lt _refine.ls_shift_over_su_mean _refine.ls_shift_over_su_mean_lt _refine.pdbx_ls_sigma_I _refine.pdbx_ls_sigma_F _refine.pdbx_ls_sigma_Fsqd _refine.pdbx_data_cutoff_high_absF _refine.pdbx_data_cutoff_high_rms_absF _refine.pdbx_data_cutoff_low_absF _refine.pdbx_isotropic_thermal_model _refine.pdbx_ls_cross_valid_method _refine.pdbx_method_to_determine_struct _refine.pdbx_starting_model _refine.pdbx_stereochemistry_target_values _refine.pdbx_R_Free_selection_details _refine.pdbx_stereochem_target_val_spec_case _refine.pdbx_overall_ESU_R _refine.pdbx_overall_ESU_R_Free _refine.pdbx_solvent_vdw_probe_radii _refine.pdbx_solvent_ion_probe_radii _refine.pdbx_solvent_shrinkage_radii _refine.pdbx_real_space_R _refine.pdbx_density_correlation _refine.pdbx_pd_number_of_powder_patterns _refine.pdbx_pd_number_of_points _refine.pdbx_pd_meas_number_of_points _refine.pdbx_pd_proc_ls_prof_R_factor _refine.pdbx_pd_proc_ls_prof_wR_factor _refine.pdbx_pd_Marquardt_correlation_coeff _refine.pdbx_pd_Fsqrd_R_factor _refine.pdbx_pd_ls_matrix_band_width _refine.pdbx_overall_phase_error _refine.pdbx_overall_SU_R_free_Cruickshank_DPI _refine.pdbx_overall_SU_R_free_Blow_DPI _refine.pdbx_overall_SU_R_Blow_DPI _refine.pdbx_TLS_residual_ADP_flag _refine.pdbx_diffrn_id _refine.overall_SU_B _refine.overall_SU_ML _refine.overall_SU_R_Cruickshank_DPI _refine.overall_SU_R_free _refine.overall_FOM_free_R_set _refine.overall_FOM_work_R_set _refine.pdbx_average_fsc_overall _refine.pdbx_average_fsc_work _refine.pdbx_average_fsc_free ? ? ? ? ? ? 90.31 27.66 8.69 ? ? ? ? ? ? ? ? ? 6D4L 'X-RAY DIFFRACTION' ? ? ? ? ? 1.56 40.0 ? ? ? ? ? ? ? ? ? ? ? ? 3484 2960 198 ? ? 84.6 5.0 ? ? 0.276 ? ? 0.242 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 300 0.642621 ? ? ? ? ? ? ? ? 2.5 ? ? ? ? ? 'FREE R-VALUE' 'MOLECULAR REPLACEMENT' 'PDB entry 4FP6' 'joint X_ray/neutron ML' random ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 90.31 27.66 8.69 ? ? ? ? ? ? ? ? ? 6D4L 'NEUTRON DIFFRACTION' ? ? ? ? ? 2.00 20.0 ? ? ? ? ? ? ? ? ? ? ? ? 1717 1204 64 ? ? 70.0 5.0 ? ? 0.312 ? ? 0.250 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 300 0.642621 ? ? ? ? ? ? ? ? 2.5 ? ? ? ? ? 'FREE R-VALUE' 'MOLECULAR REPLACEMENT' ? 'joint X_ray/neutron ML' random ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? # loop_ _refine_analyze.entry_id _refine_analyze.pdbx_refine_id _refine_analyze.Luzzati_coordinate_error_free _refine_analyze.Luzzati_coordinate_error_obs _refine_analyze.Luzzati_d_res_low_free _refine_analyze.Luzzati_d_res_low_obs _refine_analyze.Luzzati_sigma_a_free _refine_analyze.Luzzati_sigma_a_free_details _refine_analyze.Luzzati_sigma_a_obs _refine_analyze.Luzzati_sigma_a_obs_details _refine_analyze.number_disordered_residues _refine_analyze.occupancy_sum_hydrogen _refine_analyze.occupancy_sum_non_hydrogen _refine_analyze.RG_d_res_high _refine_analyze.RG_d_res_low _refine_analyze.RG_free _refine_analyze.RG_work _refine_analyze.RG_free_work_ratio _refine_analyze.pdbx_Luzzati_d_res_high_obs 6D4L 'X-RAY DIFFRACTION' 0.20 0.20 ? 5.00 ? ? 0.12 ? ? ? ? ? ? ? ? ? 1.56 6D4L 'NEUTRON DIFFRACTION' 0.50 0.31 ? 5.00 0.51 ? 0.56 ? ? ? ? ? ? ? ? ? 2.00 # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 163 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 1 _refine_hist.number_atoms_solvent 29 _refine_hist.number_atoms_total 193 _refine_hist.d_res_high 1.56 _refine_hist.d_res_low 40.0 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.007 ? ? ? x_bond_d ? ? 'X-RAY DIFFRACTION' ? 1.0 ? ? ? x_angle_deg ? ? 'X-RAY DIFFRACTION' ? 0.5 ? ? ? x_torsion_deg ? ? 'X-RAY DIFFRACTION' ? 1.03 ? ? ? x_torsion_impr_deg ? ? 'NEUTRON DIFFRACTION' ? 0.007 ? ? ? x_bond_d ? ? 'NEUTRON DIFFRACTION' ? 1.0 ? ? ? x_angle_deg ? ? 'NEUTRON DIFFRACTION' ? 0.5 ? ? ? x_torsion_deg ? ? 'NEUTRON DIFFRACTION' ? 1.03 ? ? ? x_torsion_impr_deg ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 1.56 1.63 428 144 9 135 33.6 5.0 . . 0.168 0.056 0.298 . . . . . . 8 . . . 'X-RAY DIFFRACTION' 1.63 1.72 416 317 22 295 76.0 6.9 . . 0.198 0.042 0.224 . . . . . . 8 . . . 'X-RAY DIFFRACTION' 1.72 1.83 419 360 23 337 85.9 6.4 . . 0.215 0.045 0.225 . . . . . . 8 . . . 'X-RAY DIFFRACTION' 1.83 1.97 427 384 23 361 89.9 6.0 . . 0.235 0.049 0.231 . . . . . . 8 . . . 'X-RAY DIFFRACTION' 1.97 2.17 436 404 28 376 92.7 6.9 . . 0.309 0.058 0.240 . . . . . . 8 . . . 'X-RAY DIFFRACTION' 2.17 2.48 431 409 25 384 94.9 6.1 . . 0.228 0.046 0.248 . . . . . . 8 . . . 'X-RAY DIFFRACTION' 2.48 3.12 445 427 32 395 96.0 7.5 . . 0.262 0.046 0.241 . . . . . . 8 . . . 'X-RAY DIFFRACTION' 3.12 30.19 485 468 31 437 96.3 6.6 . . 0.321 0.058 0.245 . . . . . . 8 . . . 'NEUTRON DIFFRACTION' 2.00 2.09 212 102 6 96 48.1 5.0 . . 0.434 0.177 0.452 . . . . . . 8 . . . 'NEUTRON DIFFRACTION' 2.09 2.20 203 101 5 96 49.5 5.0 . . 0.242 0.108 0.364 . . . . . . 8 . . . 'NEUTRON DIFFRACTION' 2.20 2.34 208 115 9 106 55.3 7.8 . . 0.534 0.178 0.391 . . . . . . 8 . . . 'NEUTRON DIFFRACTION' 2.34 2.52 211 129 9 120 61.1 7.0 . . 0.455 0.152 0.315 . . . . . . 8 . . . 'NEUTRON DIFFRACTION' 2.52 2.77 207 155 11 144 74.9 7.1 . . 0.231 0.070 0.247 . . . . . . 8 . . . 'NEUTRON DIFFRACTION' 2.77 3.17 215 170 12 158 79.1 7.1 . . 0.352 0.102 0.225 . . . . . . 8 . . . 'NEUTRON DIFFRACTION' 3.17 3.99 218 200 17 183 91.7 8.5 . . 0.209 0.051 0.179 . . . . . . 8 . . . 'NEUTRON DIFFRACTION' 3.99 19.09 245 232 9 223 94.7 3.9 . . 0.337 0.112 0.210 . . . . . . 8 . . . # _struct.entry_id 6D4L _struct.title ;Joint X-ray/neutron structure of DNA oligonucleotide d(GTGGCCAC)2 with 2'-SeCH3 modification on Cyt5 ; _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6D4L _struct_keywords.text 'DNA oligonucleotide selenium modification, DNA' _struct_keywords.pdbx_keywords DNA # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A DG 4 "O3'" ? ? ? 1_555 A CSL 5 P ? ? A DG 4 A CSL 5 1_555 ? ? ? ? ? ? ? 1.613 ? ? covale2 covale both ? A CSL 5 "O3'" ? ? ? 1_555 A DC 6 P ? ? A CSL 5 A DC 6 1_555 ? ? ? ? ? ? ? 1.605 ? ? metalc1 metalc ? ? B MG . MG ? ? ? 1_555 C DOD . O ? ? A MG 101 A DOD 203 1_555 ? ? ? ? ? ? ? 2.365 ? ? metalc2 metalc ? ? B MG . MG ? ? ? 1_555 C DOD . O ? ? A MG 101 A DOD 209 1_555 ? ? ? ? ? ? ? 1.928 ? ? metalc3 metalc ? ? B MG . MG ? ? ? 1_555 C DOD . O ? ? A MG 101 A DOD 213 1_555 ? ? ? ? ? ? ? 2.159 ? ? metalc4 metalc ? ? B MG . MG ? ? ? 1_555 C DOD . O ? ? A MG 101 A DOD 223 1_555 ? ? ? ? ? ? ? 2.241 ? ? metalc5 metalc ? ? B MG . MG ? ? ? 1_555 C DOD . O ? ? A MG 101 A DOD 228 1_555 ? ? ? ? ? ? ? 2.297 ? ? metalc6 metalc ? ? B MG . MG ? ? ? 1_555 C DOD . O ? ? A MG 101 A DOD 229 1_555 ? ? ? ? ? ? ? 2.353 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id MG _struct_site.pdbx_auth_seq_id 101 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 6 _struct_site.details 'binding site for residue MG A 101' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 DOD C . ? DOD A 203 . ? 1_555 ? 2 AC1 6 DOD C . ? DOD A 209 . ? 1_555 ? 3 AC1 6 DOD C . ? DOD A 213 . ? 1_555 ? 4 AC1 6 DOD C . ? DOD A 223 . ? 1_555 ? 5 AC1 6 DOD C . ? DOD A 228 . ? 1_555 ? 6 AC1 6 DOD C . ? DOD A 229 . ? 1_555 ? # _atom_sites.entry_id 6D4L _atom_sites.fract_transf_matrix[1][1] 0.023422 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.023422 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.040967 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C D H MG N O P SE # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_alt_id _atom_site.label_comp_id _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.label_seq_id _atom_site.pdbx_PDB_ins_code _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_seq_id _atom_site.auth_comp_id _atom_site.auth_asym_id _atom_site.auth_atom_id _atom_site.pdbx_PDB_model_num ATOM 1 O "O5'" . DG A 1 1 ? -1.245 -7.409 -10.897 1.00 21.35 ? 1 DG A "O5'" 1 ATOM 2 C "C5'" . DG A 1 1 ? -2.554 -7.120 -10.440 1.00 20.30 ? 1 DG A "C5'" 1 ATOM 3 C "C4'" . DG A 1 1 ? -3.173 -8.337 -9.789 1.00 19.93 ? 1 DG A "C4'" 1 ATOM 4 O "O4'" . DG A 1 1 ? -3.197 -9.439 -10.731 1.00 18.62 ? 1 DG A "O4'" 1 ATOM 5 C "C3'" . DG A 1 1 ? -2.442 -8.887 -8.562 1.00 20.27 ? 1 DG A "C3'" 1 ATOM 6 O "O3'" . DG A 1 1 ? -2.918 -8.241 -7.371 1.00 21.53 ? 1 DG A "O3'" 1 ATOM 7 C "C2'" . DG A 1 1 ? -2.873 -10.344 -8.570 1.00 20.29 ? 1 DG A "C2'" 1 ATOM 8 C "C1'" . DG A 1 1 ? -2.870 -10.659 -10.056 1.00 18.32 ? 1 DG A "C1'" 1 ATOM 9 N N9 . DG A 1 1 ? -1.576 -11.131 -10.549 1.00 18.26 ? 1 DG A N9 1 ATOM 10 C C8 . DG A 1 1 ? -0.683 -10.450 -11.352 1.00 17.32 ? 1 DG A C8 1 ATOM 11 N N7 . DG A 1 1 ? 0.378 -11.154 -11.657 1.00 17.09 ? 1 DG A N7 1 ATOM 12 C C5 . DG A 1 1 ? 0.181 -12.371 -11.010 1.00 16.44 ? 1 DG A C5 1 ATOM 13 C C6 . DG A 1 1 ? 0.986 -13.529 -10.979 1.00 15.45 ? 1 DG A C6 1 ATOM 14 O O6 . DG A 1 1 ? 2.056 -13.725 -11.533 1.00 15.39 ? 1 DG A O6 1 ATOM 15 N N1 . DG A 1 1 ? 0.415 -14.536 -10.207 1.00 15.53 ? 1 DG A N1 1 ATOM 16 C C2 . DG A 1 1 ? -0.780 -14.442 -9.550 1.00 17.00 ? 1 DG A C2 1 ATOM 17 N N2 . DG A 1 1 ? -1.164 -15.550 -8.862 1.00 17.81 ? 1 DG A N2 1 ATOM 18 N N3 . DG A 1 1 ? -1.551 -13.356 -9.567 1.00 15.90 ? 1 DG A N3 1 ATOM 19 C C4 . DG A 1 1 ? -1.014 -12.371 -10.314 1.00 16.49 ? 1 DG A C4 1 ATOM 20 H "H5'" . DG A 1 1 ? -3.173 -6.812 -11.284 1.00 20.74 ? 1 DG A "H5'" 1 ATOM 21 H "H5''" . DG A 1 1 ? -2.509 -6.307 -9.716 1.00 20.74 ? 1 DG A "H5''" 1 ATOM 22 H "H4'" . DG A 1 1 ? -4.166 -8.048 -9.450 1.00 19.59 ? 1 DG A "H4'" 1 ATOM 23 H "H3'" . DG A 1 1 ? -1.360 -8.769 -8.651 1.00 20.58 ? 1 DG A "H3'" 1 ATOM 24 H "H2'" . DG A 1 1 ? -2.186 -10.972 -8.011 1.00 19.35 ? 1 DG A "H2'" 1 ATOM 25 H "H2''" . DG A 1 1 ? -3.857 -10.465 -8.106 1.00 19.67 ? 1 DG A "H2''" 1 ATOM 26 H "H1'" . DG A 1 1 ? -3.633 -11.397 -10.309 1.00 18.97 ? 1 DG A "H1'" 1 ATOM 27 D D8 A DG A 1 1 ? -0.842 -9.438 -11.695 0.36 17.46 ? 1 DG A D8 1 ATOM 28 H H8 B DG A 1 1 ? -0.842 -9.438 -11.695 0.64 17.46 ? 1 DG A H8 1 ATOM 29 D D1 . DG A 1 1 ? 0.932 -15.388 -10.142 1.00 15.06 ? 1 DG A D1 1 ATOM 30 D D21 A DG A 1 1 ? -2.030 -15.579 -8.354 0.72 15.14 ? 1 DG A D21 1 ATOM 31 H H21 B DG A 1 1 ? -2.030 -15.579 -8.354 0.28 15.14 ? 1 DG A H21 1 ATOM 32 D D22 A DG A 1 1 ? -0.569 -16.367 -8.885 0.55 16.18 ? 1 DG A D22 1 ATOM 33 H H22 B DG A 1 1 ? -0.569 -16.367 -8.885 0.45 16.18 ? 1 DG A H22 1 ATOM 34 D D5T A DG A 1 1 ? -1.163 -6.962 -11.735 0.36 21.05 ? 1 DG A D5T 1 ATOM 35 H H5T B DG A 1 1 ? -1.163 -6.962 -11.735 0.64 21.05 ? 1 DG A H5T 1 ATOM 36 P P . DT A 1 2 ? -1.919 -7.947 -6.141 1.00 22.26 ? 2 DT A P 1 ATOM 37 O OP1 . DT A 1 2 ? -2.713 -7.156 -5.157 1.00 23.56 ? 2 DT A OP1 1 ATOM 38 O OP2 . DT A 1 2 ? -0.650 -7.393 -6.666 1.00 22.75 ? 2 DT A OP2 1 ATOM 39 O "O5'" . DT A 1 2 ? -1.629 -9.375 -5.492 1.00 21.53 ? 2 DT A "O5'" 1 ATOM 40 C "C5'" . DT A 1 2 ? -2.567 -9.953 -4.595 1.00 21.68 ? 2 DT A "C5'" 1 ATOM 41 C "C4'" . DT A 1 2 ? -2.200 -11.384 -4.285 1.00 22.82 ? 2 DT A "C4'" 1 ATOM 42 O "O4'" . DT A 1 2 ? -2.010 -12.141 -5.502 1.00 22.19 ? 2 DT A "O4'" 1 ATOM 43 C "C3'" . DT A 1 2 ? -0.893 -11.586 -3.526 1.00 23.89 ? 2 DT A "C3'" 1 ATOM 44 O "O3'" . DT A 1 2 ? -1.094 -11.326 -2.133 1.00 24.98 ? 2 DT A "O3'" 1 ATOM 45 C "C2'" . DT A 1 2 ? -0.619 -13.053 -3.800 1.00 23.29 ? 2 DT A "C2'" 1 ATOM 46 C "C1'" . DT A 1 2 ? -1.009 -13.143 -5.281 1.00 22.51 ? 2 DT A "C1'" 1 ATOM 47 N N1 . DT A 1 2 ? 0.132 -12.896 -6.214 1.00 20.39 ? 2 DT A N1 1 ATOM 48 C C2 . DT A 1 2 ? 1.000 -13.945 -6.439 1.00 21.84 ? 2 DT A C2 1 ATOM 49 O O2 . DT A 1 2 ? 0.863 -15.046 -5.929 1.00 22.57 ? 2 DT A O2 1 ATOM 50 N N3 . DT A 1 2 ? 2.039 -13.662 -7.288 1.00 19.63 ? 2 DT A N3 1 ATOM 51 C C4 . DT A 1 2 ? 2.288 -12.475 -7.948 1.00 19.17 ? 2 DT A C4 1 ATOM 52 O O4 . DT A 1 2 ? 3.224 -12.403 -8.737 1.00 19.11 ? 2 DT A O4 1 ATOM 53 C C5 . DT A 1 2 ? 1.350 -11.405 -7.673 1.00 20.79 ? 2 DT A C5 1 ATOM 54 C C7 . DT A 1 2 ? 1.593 -10.055 -8.300 1.00 18.83 ? 2 DT A C7 1 ATOM 55 C C6 . DT A 1 2 ? 0.324 -11.666 -6.824 1.00 18.85 ? 2 DT A C6 1 ATOM 56 H "H5'" . DT A 1 2 ? -3.555 -9.930 -5.047 1.00 21.18 ? 2 DT A "H5'" 1 ATOM 57 H "H5''" . DT A 1 2 ? -2.591 -9.377 -3.665 1.00 22.28 ? 2 DT A "H5''" 1 ATOM 58 H "H4'" . DT A 1 2 ? -2.994 -11.791 -3.648 1.00 22.62 ? 2 DT A "H4'" 1 ATOM 59 H "H3'" . DT A 1 2 ? -0.104 -10.937 -3.913 1.00 23.46 ? 2 DT A "H3'" 1 ATOM 60 H "H2'" . DT A 1 2 ? 0.426 -13.306 -3.632 1.00 23.76 ? 2 DT A "H2'" 1 ATOM 61 H "H2''" . DT A 1 2 ? -1.207 -13.695 -3.137 1.00 23.97 ? 2 DT A "H2''" 1 ATOM 62 H "H1'" . DT A 1 2 ? -1.452 -14.114 -5.511 1.00 22.45 ? 2 DT A "H1'" 1 ATOM 63 D D3 A DT A 1 2 ? 2.757 -14.360 -7.371 0.96 18.36 ? 2 DT A D3 1 ATOM 64 H H3 B DT A 1 2 ? 2.757 -14.360 -7.371 0.04 18.36 ? 2 DT A H3 1 ATOM 65 H H71 . DT A 1 2 ? 2.652 -9.783 -8.186 1.00 19.41 ? 2 DT A H71 1 ATOM 66 H H72 . DT A 1 2 ? 1.339 -10.095 -9.362 1.00 20.97 ? 2 DT A H72 1 ATOM 67 H H73 . DT A 1 2 ? 0.975 -9.299 -7.811 1.00 20.55 ? 2 DT A H73 1 ATOM 68 H H6 . DT A 1 2 ? -0.385 -10.871 -6.611 1.00 20.38 ? 2 DT A H6 1 ATOM 69 P P . DG A 1 3 ? 0.078 -10.650 -1.264 1.00 28.05 ? 3 DG A P 1 ATOM 70 O OP1 . DG A 1 3 ? -0.535 -10.343 0.058 1.00 29.35 ? 3 DG A OP1 1 ATOM 71 O OP2 . DG A 1 3 ? 0.770 -9.577 -2.024 1.00 26.20 ? 3 DG A OP2 1 ATOM 72 O "O5'" . DG A 1 3 ? 1.118 -11.833 -1.048 1.00 28.30 ? 3 DG A "O5'" 1 ATOM 73 C "C5'" . DG A 1 3 ? 0.796 -12.931 -0.208 1.00 27.63 ? 3 DG A "C5'" 1 ATOM 74 C "C4'" . DG A 1 3 ? 1.774 -14.059 -0.436 1.00 27.90 ? 3 DG A "C4'" 1 ATOM 75 O "O4'" . DG A 1 3 ? 1.746 -14.485 -1.821 1.00 27.45 ? 3 DG A "O4'" 1 ATOM 76 C "C3'" . DG A 1 3 ? 3.252 -13.750 -0.215 1.00 28.02 ? 3 DG A "C3'" 1 ATOM 77 O "O3'" . DG A 1 3 ? 3.597 -13.664 1.180 1.00 29.90 ? 3 DG A "O3'" 1 ATOM 78 C "C2'" . DG A 1 3 ? 3.884 -14.960 -0.880 1.00 26.97 ? 3 DG A "C2'" 1 ATOM 79 C "C1'" . DG A 1 3 ? 3.034 -15.034 -2.152 1.00 24.03 ? 3 DG A "C1'" 1 ATOM 80 N N9 . DG A 1 3 ? 3.610 -14.269 -3.260 1.00 23.17 ? 3 DG A N9 1 ATOM 81 C C8 . DG A 1 3 ? 3.276 -13.008 -3.701 1.00 20.80 ? 3 DG A C8 1 ATOM 82 N N7 . DG A 1 3 ? 3.979 -12.622 -4.730 1.00 19.27 ? 3 DG A N7 1 ATOM 83 C C5 . DG A 1 3 ? 4.837 -13.689 -4.978 1.00 19.08 ? 3 DG A C5 1 ATOM 84 C C6 . DG A 1 3 ? 5.825 -13.861 -5.972 1.00 16.33 ? 3 DG A C6 1 ATOM 85 O O6 . DG A 1 3 ? 6.120 -13.102 -6.888 1.00 16.79 ? 3 DG A O6 1 ATOM 86 N N1 . DG A 1 3 ? 6.491 -15.081 -5.830 1.00 17.21 ? 3 DG A N1 1 ATOM 87 C C2 . DG A 1 3 ? 6.213 -16.017 -4.872 1.00 17.73 ? 3 DG A C2 1 ATOM 88 N N2 . DG A 1 3 ? 6.969 -17.117 -4.863 1.00 15.91 ? 3 DG A N2 1 ATOM 89 N N3 . DG A 1 3 ? 5.263 -15.884 -3.971 1.00 19.57 ? 3 DG A N3 1 ATOM 90 C C4 . DG A 1 3 ? 4.628 -14.703 -4.075 1.00 18.79 ? 3 DG A C4 1 ATOM 91 H "H5'" . DG A 1 3 ? -0.216 -13.281 -0.429 1.00 28.74 ? 3 DG A "H5'" 1 ATOM 92 H "H5''" . DG A 1 3 ? 0.847 -12.617 0.838 1.00 27.65 ? 3 DG A "H5''" 1 ATOM 93 H "H4'" . DG A 1 3 ? 1.511 -14.861 0.258 1.00 27.95 ? 3 DG A "H4'" 1 ATOM 94 H "H3'" . DG A 1 3 ? 3.537 -12.821 -0.719 1.00 28.50 ? 3 DG A "H3'" 1 ATOM 95 H "H2'" . DG A 1 3 ? 4.933 -14.795 -1.096 1.00 26.67 ? 3 DG A "H2'" 1 ATOM 96 H "H2''" . DG A 1 3 ? 3.835 -15.842 -0.233 1.00 27.50 ? 3 DG A "H2''" 1 ATOM 97 H "H1'" . DG A 1 3 ? 2.891 -16.069 -2.471 1.00 26.08 ? 3 DG A "H1'" 1 ATOM 98 D D8 A DG A 1 3 ? 2.526 -12.389 -3.230 0.26 21.07 ? 3 DG A D8 1 ATOM 99 H H8 B DG A 1 3 ? 2.526 -12.389 -3.230 0.74 21.07 ? 3 DG A H8 1 ATOM 100 D D1 A DG A 1 3 ? 7.238 -15.311 -6.469 0.90 16.81 ? 3 DG A D1 1 ATOM 101 H H1 B DG A 1 3 ? 7.238 -15.311 -6.469 0.10 16.81 ? 3 DG A H1 1 ATOM 102 D D21 A DG A 1 3 ? 6.792 -17.819 -4.163 0.73 15.35 ? 3 DG A D21 1 ATOM 103 H H21 B DG A 1 3 ? 6.792 -17.819 -4.163 0.27 15.35 ? 3 DG A H21 1 ATOM 104 D D22 A DG A 1 3 ? 7.709 -17.253 -5.530 0.83 16.47 ? 3 DG A D22 1 ATOM 105 H H22 B DG A 1 3 ? 7.709 -17.253 -5.530 0.17 16.47 ? 3 DG A H22 1 ATOM 106 P P . DG A 1 4 ? 4.867 -12.775 1.637 1.00 31.19 ? 4 DG A P 1 ATOM 107 O OP1 . DG A 1 4 ? 4.926 -12.772 3.129 1.00 32.84 ? 4 DG A OP1 1 ATOM 108 O OP2 . DG A 1 4 ? 4.828 -11.480 0.908 1.00 29.95 ? 4 DG A OP2 1 ATOM 109 O "O5'" . DG A 1 4 ? 6.129 -13.588 1.087 1.00 29.67 ? 4 DG A "O5'" 1 ATOM 110 C "C5'" . DG A 1 4 ? 6.613 -14.745 1.772 1.00 29.58 ? 4 DG A "C5'" 1 ATOM 111 C "C4'" . DG A 1 4 ? 7.618 -15.492 0.920 1.00 28.04 ? 4 DG A "C4'" 1 ATOM 112 O "O4'" . DG A 1 4 ? 7.115 -15.670 -0.430 1.00 27.70 ? 4 DG A "O4'" 1 ATOM 113 C "C3'" . DG A 1 4 ? 8.975 -14.826 0.712 1.00 27.75 ? 4 DG A "C3'" 1 ATOM 114 O "O3'" . DG A 1 4 ? 9.824 -14.996 1.863 1.00 27.91 ? 4 DG A "O3'" 1 ATOM 115 C "C2'" . DG A 1 4 ? 9.487 -15.603 -0.487 1.00 27.01 ? 4 DG A "C2'" 1 ATOM 116 C "C1'" . DG A 1 4 ? 8.217 -15.653 -1.345 1.00 26.11 ? 4 DG A "C1'" 1 ATOM 117 N N9 . DG A 1 4 ? 8.085 -14.486 -2.223 1.00 22.45 ? 4 DG A N9 1 ATOM 118 C C8 . DG A 1 4 ? 7.255 -13.396 -2.081 1.00 22.74 ? 4 DG A C8 1 ATOM 119 N N7 . DG A 1 4 ? 7.403 -12.511 -3.027 1.00 20.67 ? 4 DG A N7 1 ATOM 120 C C5 . DG A 1 4 ? 8.387 -13.045 -3.841 1.00 18.12 ? 4 DG A C5 1 ATOM 121 C C6 . DG A 1 4 ? 8.979 -12.539 -5.031 1.00 15.81 ? 4 DG A C6 1 ATOM 122 O O6 . DG A 1 4 ? 8.693 -11.510 -5.672 1.00 16.15 ? 4 DG A O6 1 ATOM 123 N N1 . DG A 1 4 ? 9.997 -13.374 -5.473 1.00 15.08 ? 4 DG A N1 1 ATOM 124 C C2 . DG A 1 4 ? 10.362 -14.562 -4.910 1.00 15.06 ? 4 DG A C2 1 ATOM 125 N N2 . DG A 1 4 ? 11.406 -15.190 -5.499 1.00 14.23 ? 4 DG A N2 1 ATOM 126 N N3 . DG A 1 4 ? 9.776 -15.080 -3.848 1.00 18.78 ? 4 DG A N3 1 ATOM 127 C C4 . DG A 1 4 ? 8.819 -14.262 -3.355 1.00 19.08 ? 4 DG A C4 1 ATOM 128 H "H5'" . DG A 1 4 ? 5.781 -15.412 2.002 1.00 29.84 ? 4 DG A "H5'" 1 ATOM 129 H "H5''" . DG A 1 4 ? 7.093 -14.444 2.703 1.00 28.89 ? 4 DG A "H5''" 1 ATOM 130 H "H4'" . DG A 1 4 ? 7.815 -16.443 1.427 1.00 27.66 ? 4 DG A "H4'" 1 ATOM 131 H "H3'" . DG A 1 4 ? 8.862 -13.764 0.488 1.00 29.10 ? 4 DG A "H3'" 1 ATOM 132 H "H2'" . DG A 1 4 ? 10.299 -15.075 -0.983 1.00 26.53 ? 4 DG A "H2'" 1 ATOM 133 H "H2''" . DG A 1 4 ? 9.883 -16.579 -0.188 1.00 27.29 ? 4 DG A "H2''" 1 ATOM 134 H "H1'" . DG A 1 4 ? 8.176 -16.561 -1.951 1.00 25.83 ? 4 DG A "H1'" 1 ATOM 135 H H8 . DG A 1 4 ? 6.579 -13.263 -1.251 1.00 21.53 ? 4 DG A H8 1 ATOM 136 D D1 A DG A 1 4 ? 10.530 -13.115 -6.240 0.97 13.02 ? 4 DG A D1 1 ATOM 137 H H1 B DG A 1 4 ? 10.530 -13.115 -6.240 0.03 13.02 ? 4 DG A H1 1 ATOM 138 D D21 A DG A 1 4 ? 11.790 -16.066 -5.173 0.83 12.51 ? 4 DG A D21 1 ATOM 139 H H21 B DG A 1 4 ? 11.790 -16.066 -5.173 0.17 12.51 ? 4 DG A H21 1 ATOM 140 D D22 A DG A 1 4 ? 11.823 -14.757 -6.302 0.60 13.51 ? 4 DG A D22 1 ATOM 141 H H22 B DG A 1 4 ? 11.823 -14.757 -6.302 0.40 13.51 ? 4 DG A H22 1 HETATM 142 P P . CSL A 1 5 ? 10.936 -13.883 2.217 1.00 28.30 ? 5 CSL A P 1 HETATM 143 O O2P . CSL A 1 5 ? 10.431 -12.506 1.949 1.00 27.25 ? 5 CSL A O2P 1 HETATM 144 O O1P . CSL A 1 5 ? 11.527 -14.226 3.534 1.00 29.80 ? 5 CSL A O1P 1 HETATM 145 O "O5'" . CSL A 1 5 ? 12.122 -14.001 1.158 1.00 24.69 ? 5 CSL A "O5'" 1 HETATM 146 C "C5'" . CSL A 1 5 ? 12.941 -15.140 1.088 1.00 20.20 ? 5 CSL A "C5'" 1 HETATM 147 C "C4'" . CSL A 1 5 ? 13.688 -15.162 -0.198 1.00 19.15 ? 5 CSL A "C4'" 1 HETATM 148 O "O4'" . CSL A 1 5 ? 12.792 -14.998 -1.322 1.00 17.39 ? 5 CSL A "O4'" 1 HETATM 149 C "C1'" . CSL A 1 5 ? 13.470 -14.325 -2.375 1.00 14.17 ? 5 CSL A "C1'" 1 HETATM 150 N N1 . CSL A 1 5 ? 12.752 -13.079 -2.669 1.00 14.78 ? 5 CSL A N1 1 HETATM 151 C C2 . CSL A 1 5 ? 13.104 -12.401 -3.851 1.00 13.85 ? 5 CSL A C2 1 HETATM 152 O O2 . CSL A 1 5 ? 13.996 -12.859 -4.586 1.00 13.98 ? 5 CSL A O2 1 HETATM 153 N N3 . CSL A 1 5 ? 12.431 -11.240 -4.150 1.00 13.61 ? 5 CSL A N3 1 HETATM 154 C C4 . CSL A 1 5 ? 11.478 -10.778 -3.349 1.00 14.62 ? 5 CSL A C4 1 HETATM 155 N N4 . CSL A 1 5 ? 10.858 -9.656 -3.701 1.00 17.91 ? 5 CSL A N4 1 HETATM 156 C C5 . CSL A 1 5 ? 11.106 -11.441 -2.144 1.00 16.26 ? 5 CSL A C5 1 HETATM 157 C C6 . CSL A 1 5 ? 11.761 -12.573 -1.847 1.00 14.04 ? 5 CSL A C6 1 HETATM 158 C "C2'" . CSL A 1 5 ? 14.856 -14.093 -1.908 1.00 16.97 ? 5 CSL A "C2'" 1 HETATM 159 SE "SE2'" . CSL A 1 5 ? 15.947 -15.614 -2.467 1.00 8.69 ? 5 CSL A "SE2'" 1 HETATM 160 C "CA'" . CSL A 1 5 ? 16.218 -15.316 -4.343 1.00 17.90 ? 5 CSL A "CA'" 1 HETATM 161 C "C3'" . CSL A 1 5 ? 14.693 -14.045 -0.414 1.00 17.28 ? 5 CSL A "C3'" 1 HETATM 162 O "O3'" . CSL A 1 5 ? 15.877 -14.295 0.301 1.00 19.54 ? 5 CSL A "O3'" 1 HETATM 163 H "H5'1" . CSL A 1 5 ? 12.293 -16.019 1.123 1.00 20.52 ? 5 CSL A "H5'1" 1 HETATM 164 H "H5'2" . CSL A 1 5 ? 13.636 -15.156 1.929 1.00 20.63 ? 5 CSL A "H5'2" 1 HETATM 165 H "H4'" . CSL A 1 5 ? 14.205 -16.116 -0.135 1.00 17.64 ? 5 CSL A "H4'" 1 HETATM 166 H "H1'" . CSL A 1 5 ? 13.507 -14.900 -3.308 1.00 14.28 ? 5 CSL A "H1'" 1 HETATM 167 D DN41 . CSL A 1 5 ? 10.000 -9.395 -3.221 1.00 19.04 ? 5 CSL A DN41 1 HETATM 168 D DN42 . CSL A 1 5 ? 11.232 -9.070 -4.448 1.00 18.82 ? 5 CSL A DN42 1 HETATM 169 H H5 . CSL A 1 5 ? 10.327 -11.050 -1.494 1.00 13.80 ? 5 CSL A H5 1 HETATM 170 H H6 . CSL A 1 5 ? 11.507 -13.111 -0.930 1.00 15.35 ? 5 CSL A H6 1 HETATM 171 H "H2'" . CSL A 1 5 ? 15.343 -13.205 -2.292 1.00 14.08 ? 5 CSL A "H2'" 1 HETATM 172 H "HA'1" . CSL A 1 5 ? 17.056 -15.916 -4.692 1.00 12.49 ? 5 CSL A "HA'1" 1 HETATM 173 H "HA'2" . CSL A 1 5 ? 16.454 -14.261 -4.502 1.00 13.82 ? 5 CSL A "HA'2" 1 HETATM 174 H "HA'3" . CSL A 1 5 ? 15.318 -15.587 -4.886 1.00 12.67 ? 5 CSL A "HA'3" 1 HETATM 175 H "H3'" . CSL A 1 5 ? 14.367 -13.072 -0.052 1.00 19.82 ? 5 CSL A "H3'" 1 ATOM 176 P P . DC A 1 6 ? 16.744 -13.059 0.846 1.00 18.95 ? 6 DC A P 1 ATOM 177 O OP1 . DC A 1 6 ? 17.711 -13.771 1.720 1.00 23.41 ? 6 DC A OP1 1 ATOM 178 O OP2 . DC A 1 6 ? 15.894 -11.972 1.409 1.00 21.25 ? 6 DC A OP2 1 ATOM 179 O "O5'" . DC A 1 6 ? 17.531 -12.466 -0.405 1.00 19.47 ? 6 DC A "O5'" 1 ATOM 180 C "C5'" . DC A 1 6 ? 18.570 -13.210 -1.057 1.00 19.21 ? 6 DC A "C5'" 1 ATOM 181 C "C4'" . DC A 1 6 ? 19.042 -12.477 -2.295 1.00 18.82 ? 6 DC A "C4'" 1 ATOM 182 O "O4'" . DC A 1 6 ? 17.987 -12.372 -3.285 1.00 17.60 ? 6 DC A "O4'" 1 ATOM 183 C "C3'" . DC A 1 6 ? 19.483 -11.033 -2.073 1.00 18.28 ? 6 DC A "C3'" 1 ATOM 184 O "O3'" . DC A 1 6 ? 20.799 -11.034 -1.508 1.00 20.14 ? 6 DC A "O3'" 1 ATOM 185 C "C2'" . DC A 1 6 ? 19.429 -10.497 -3.493 1.00 17.18 ? 6 DC A "C2'" 1 ATOM 186 C "C1'" . DC A 1 6 ? 18.113 -11.124 -3.981 1.00 16.83 ? 6 DC A "C1'" 1 ATOM 187 N N1 . DC A 1 6 ? 16.892 -10.298 -3.707 1.00 14.06 ? 6 DC A N1 1 ATOM 188 C C2 . DC A 1 6 ? 16.563 -9.263 -4.604 1.00 14.06 ? 6 DC A C2 1 ATOM 189 O O2 . DC A 1 6 ? 17.316 -9.035 -5.570 1.00 15.65 ? 6 DC A O2 1 ATOM 190 N N3 . DC A 1 6 ? 15.440 -8.525 -4.393 1.00 12.41 ? 6 DC A N3 1 ATOM 191 C C4 . DC A 1 6 ? 14.669 -8.774 -3.338 1.00 10.97 ? 6 DC A C4 1 ATOM 192 N N4 . DC A 1 6 ? 13.550 -8.056 -3.193 1.00 12.49 ? 6 DC A N4 1 ATOM 193 C C5 . DC A 1 6 ? 14.996 -9.790 -2.387 1.00 12.64 ? 6 DC A C5 1 ATOM 194 C C6 . DC A 1 6 ? 16.097 -10.530 -2.616 1.00 12.62 ? 6 DC A C6 1 ATOM 195 H "H5'" . DC A 1 6 ? 18.198 -14.190 -1.347 1.00 19.27 ? 6 DC A "H5'" 1 ATOM 196 H "H5''" . DC A 1 6 ? 19.415 -13.339 -0.377 1.00 21.06 ? 6 DC A "H5''" 1 ATOM 197 H "H4'" . DC A 1 6 ? 19.921 -13.013 -2.665 1.00 18.06 ? 6 DC A "H4'" 1 ATOM 198 H "H3'" . DC A 1 6 ? 18.796 -10.502 -1.404 1.00 18.37 ? 6 DC A "H3'" 1 ATOM 199 H "H2'" . DC A 1 6 ? 19.403 -9.410 -3.513 1.00 15.86 ? 6 DC A "H2'" 1 ATOM 200 H "H2''" . DC A 1 6 ? 20.313 -10.799 -4.064 1.00 15.95 ? 6 DC A "H2''" 1 ATOM 201 H "H1'" . DC A 1 6 ? 18.154 -11.346 -5.051 1.00 16.13 ? 6 DC A "H1'" 1 ATOM 202 D D41 A DC A 1 6 ? 12.969 -8.265 -2.405 0.64 11.51 ? 6 DC A D41 1 ATOM 203 H H41 B DC A 1 6 ? 12.969 -8.265 -2.405 0.36 11.51 ? 6 DC A H41 1 ATOM 204 D D42 A DC A 1 6 ? 13.254 -7.311 -3.794 0.88 9.59 ? 6 DC A D42 1 ATOM 205 H H42 B DC A 1 6 ? 13.254 -7.311 -3.794 0.12 9.59 ? 6 DC A H42 1 ATOM 206 H H5 . DC A 1 6 ? 14.390 -9.938 -1.489 1.00 11.37 ? 6 DC A H5 1 ATOM 207 H H6 . DC A 1 6 ? 16.354 -11.330 -1.920 1.00 13.47 ? 6 DC A H6 1 ATOM 208 P P . DA A 1 7 ? 21.325 -9.773 -0.657 1.00 21.25 ? 7 DA A P 1 ATOM 209 O OP1 . DA A 1 7 ? 22.729 -10.129 -0.282 1.00 24.88 ? 7 DA A OP1 1 ATOM 210 O OP2 . DA A 1 7 ? 20.365 -9.461 0.414 1.00 21.95 ? 7 DA A OP2 1 ATOM 211 O "O5'" . DA A 1 7 ? 21.371 -8.598 -1.730 1.00 18.66 ? 7 DA A "O5'" 1 ATOM 212 C "C5'" . DA A 1 7 ? 22.413 -8.545 -2.716 1.00 19.04 ? 7 DA A "C5'" 1 ATOM 213 C "C4'" . DA A 1 7 ? 22.141 -7.435 -3.706 1.00 17.77 ? 7 DA A "C4'" 1 ATOM 214 O "O4'" . DA A 1 7 ? 20.808 -7.582 -4.252 1.00 18.07 ? 7 DA A "O4'" 1 ATOM 215 C "C3'" . DA A 1 7 ? 22.150 -6.022 -3.129 1.00 19.00 ? 7 DA A "C3'" 1 ATOM 216 O "O3'" . DA A 1 7 ? 23.498 -5.518 -3.069 1.00 18.59 ? 7 DA A "O3'" 1 ATOM 217 C "C2'" . DA A 1 7 ? 21.314 -5.253 -4.140 1.00 17.51 ? 7 DA A "C2'" 1 ATOM 218 C "C1'" . DA A 1 7 ? 20.264 -6.289 -4.543 1.00 17.34 ? 7 DA A "C1'" 1 ATOM 219 N N9 . DA A 1 7 ? 18.993 -6.149 -3.823 1.00 17.04 ? 7 DA A N9 1 ATOM 220 C C8 . DA A 1 7 ? 18.516 -6.840 -2.724 1.00 15.09 ? 7 DA A C8 1 ATOM 221 N N7 . DA A 1 7 ? 17.300 -6.488 -2.372 1.00 13.14 ? 7 DA A N7 1 ATOM 222 C C5 . DA A 1 7 ? 16.971 -5.476 -3.270 1.00 14.61 ? 7 DA A C5 1 ATOM 223 C C6 . DA A 1 7 ? 15.828 -4.687 -3.430 1.00 14.42 ? 7 DA A C6 1 ATOM 224 N N6 . DA A 1 7 ? 14.745 -4.797 -2.672 1.00 13.77 ? 7 DA A N6 1 ATOM 225 N N1 . DA A 1 7 ? 15.828 -3.767 -4.427 1.00 14.01 ? 7 DA A N1 1 ATOM 226 C C2 . DA A 1 7 ? 16.907 -3.667 -5.199 1.00 14.66 ? 7 DA A C2 1 ATOM 227 N N3 . DA A 1 7 ? 18.036 -4.355 -5.151 1.00 14.29 ? 7 DA A N3 1 ATOM 228 C C4 . DA A 1 7 ? 18.003 -5.256 -4.159 1.00 15.47 ? 7 DA A C4 1 ATOM 229 D DOP2 A DA A 1 7 ? 19.847 -8.731 0.032 0.79 22.75 ? 7 DA A DOP2 1 ATOM 230 H HOP2 B DA A 1 7 ? 19.847 -8.731 0.032 0.21 22.75 ? 7 DA A HOP2 1 ATOM 231 H "H5'" . DA A 1 7 ? 22.465 -9.497 -3.250 1.00 17.63 ? 7 DA A "H5'" 1 ATOM 232 H "H5''" . DA A 1 7 ? 23.370 -8.359 -2.221 1.00 18.60 ? 7 DA A "H5''" 1 ATOM 233 H "H4'" . DA A 1 7 ? 22.926 -7.466 -4.470 1.00 18.30 ? 7 DA A "H4'" 1 ATOM 234 H "H3'" . DA A 1 7 ? 21.706 -6.003 -2.131 1.00 17.97 ? 7 DA A "H3'" 1 ATOM 235 H "H2'" . DA A 1 7 ? 20.870 -4.364 -3.693 1.00 18.28 ? 7 DA A "H2'" 1 ATOM 236 H "H2''" . DA A 1 7 ? 21.930 -4.909 -4.976 1.00 16.30 ? 7 DA A "H2''" 1 ATOM 237 H "H1'" . DA A 1 7 ? 20.066 -6.255 -5.619 1.00 17.98 ? 7 DA A "H1'" 1 ATOM 238 H H8 . DA A 1 7 ? 19.099 -7.577 -2.183 1.00 16.21 ? 7 DA A H8 1 ATOM 239 D D61 A DA A 1 7 ? 14.740 -5.486 -1.942 0.67 12.16 ? 7 DA A D61 1 ATOM 240 H H61 B DA A 1 7 ? 14.740 -5.486 -1.942 0.33 12.16 ? 7 DA A H61 1 ATOM 241 D D62 A DA A 1 7 ? 13.953 -4.186 -2.850 0.89 13.67 ? 7 DA A D62 1 ATOM 242 H H62 B DA A 1 7 ? 13.953 -4.186 -2.850 0.11 13.67 ? 7 DA A H62 1 ATOM 243 H H2 . DA A 1 7 ? 16.858 -2.912 -5.981 1.00 11.67 ? 7 DA A H2 1 ATOM 244 P P . DC A 1 8 ? 23.930 -4.504 -1.889 1.00 21.66 ? 8 DC A P 1 ATOM 245 O OP1 . DC A 1 8 ? 25.399 -4.309 -1.982 1.00 22.94 ? 8 DC A OP1 1 ATOM 246 O OP2 . DC A 1 8 ? 23.343 -4.965 -0.607 1.00 22.91 ? 8 DC A OP2 1 ATOM 247 O "O5'" . DC A 1 8 ? 23.238 -3.126 -2.291 1.00 21.63 ? 8 DC A "O5'" 1 ATOM 248 C "C5'" . DC A 1 8 ? 23.680 -2.399 -3.439 1.00 23.31 ? 8 DC A "C5'" 1 ATOM 249 C "C4'" . DC A 1 8 ? 22.711 -1.283 -3.752 1.00 24.77 ? 8 DC A "C4'" 1 ATOM 250 O "O4'" . DC A 1 8 ? 21.392 -1.852 -3.824 1.00 25.65 ? 8 DC A "O4'" 1 ATOM 251 C "C3'" . DC A 1 8 ? 22.613 -0.174 -2.702 1.00 27.61 ? 8 DC A "C3'" 1 ATOM 252 O "O3'" . DC A 1 8 ? 23.493 0.893 -3.072 1.00 29.35 ? 8 DC A "O3'" 1 ATOM 253 C "C2'" . DC A 1 8 ? 21.161 0.279 -2.770 1.00 25.78 ? 8 DC A "C2'" 1 ATOM 254 C "C1'" . DC A 1 8 ? 20.423 -0.883 -3.440 1.00 25.18 ? 8 DC A "C1'" 1 ATOM 255 N N1 . DC A 1 8 ? 19.423 -1.551 -2.574 1.00 21.97 ? 8 DC A N1 1 ATOM 256 C C2 . DC A 1 8 ? 18.088 -1.132 -2.662 1.00 19.49 ? 8 DC A C2 1 ATOM 257 O O2 . DC A 1 8 ? 17.808 -0.190 -3.414 1.00 20.28 ? 8 DC A O2 1 ATOM 258 N N3 . DC A 1 8 ? 17.150 -1.752 -1.925 1.00 18.31 ? 8 DC A N3 1 ATOM 259 C C4 . DC A 1 8 ? 17.493 -2.746 -1.114 1.00 18.57 ? 8 DC A C4 1 ATOM 260 N N4 . DC A 1 8 ? 16.535 -3.334 -0.432 1.00 18.99 ? 8 DC A N4 1 ATOM 261 C C5 . DC A 1 8 ? 18.850 -3.183 -0.976 1.00 18.77 ? 8 DC A C5 1 ATOM 262 C C6 . DC A 1 8 ? 19.773 -2.557 -1.716 1.00 18.48 ? 8 DC A C6 1 ATOM 263 H "H5'" . DC A 1 8 ? 23.738 -3.072 -4.296 1.00 22.24 ? 8 DC A "H5'" 1 ATOM 264 H "H5''" . DC A 1 8 ? 24.672 -1.981 -3.250 1.00 23.39 ? 8 DC A "H5''" 1 ATOM 265 H "H4'" . DC A 1 8 ? 23.029 -0.810 -4.687 1.00 25.86 ? 8 DC A "H4'" 1 ATOM 266 H "H3'" . DC A 1 8 ? 22.886 -0.535 -1.711 1.00 26.85 ? 8 DC A "H3'" 1 ATOM 267 D "DO3'" A DC A 1 8 ? 23.198 1.690 -2.621 0.73 28.78 ? 8 DC A "DO3'" 1 ATOM 268 H "HO3'" B DC A 1 8 ? 23.198 1.690 -2.621 0.27 28.78 ? 8 DC A "HO3'" 1 ATOM 269 H "H2'" . DC A 1 8 ? 20.767 0.497 -1.773 1.00 26.09 ? 8 DC A "H2'" 1 ATOM 270 H "H2''" . DC A 1 8 ? 21.071 1.199 -3.352 1.00 26.78 ? 8 DC A "H2''" 1 ATOM 271 H "H1'" . DC A 1 8 ? 19.918 -0.551 -4.350 1.00 23.86 ? 8 DC A "H1'" 1 ATOM 272 D D41 A DC A 1 8 ? 15.577 -3.030 -0.538 0.61 18.95 ? 8 DC A D41 1 ATOM 273 H H41 B DC A 1 8 ? 15.577 -3.030 -0.538 0.39 18.95 ? 8 DC A H41 1 ATOM 274 D D42 . DC A 1 8 ? 16.794 -4.097 0.184 1.00 21.96 ? 8 DC A D42 1 ATOM 275 H H5 . DC A 1 8 ? 19.118 -4.000 -0.303 1.00 18.78 ? 8 DC A H5 1 ATOM 276 H H6 . DC A 1 8 ? 20.820 -2.851 -1.622 1.00 19.72 ? 8 DC A H6 1 HETATM 277 MG MG . MG B 2 . ? 5.394 -9.089 -4.918 0.50 34.29 ? 101 MG A MG 1 HETATM 278 O O . DOD C 3 . ? -0.463 -7.005 -13.236 1.00 59.00 ? 201 DOD A O 1 HETATM 279 D D1 . DOD C 3 . ? -0.287 -7.731 -13.833 1.00 59.60 ? 201 DOD A D1 1 HETATM 280 D D2 . DOD C 3 . ? -0.713 -6.279 -13.807 1.00 59.49 ? 201 DOD A D2 1 HETATM 281 O O . DOD C 3 . ? 4.069 -12.465 -12.460 1.00 60.98 ? 202 DOD A O 1 HETATM 282 D D1 . DOD C 3 . ? 4.865 -12.977 -12.311 1.00 61.61 ? 202 DOD A D1 1 HETATM 283 D D2 . DOD C 3 . ? 3.373 -12.979 -12.051 1.00 61.69 ? 202 DOD A D2 1 HETATM 284 O O . DOD C 3 . ? 6.310 -10.567 -6.521 1.00 69.07 ? 203 DOD A O 1 HETATM 285 D D1 . DOD C 3 . ? 5.989 -11.461 -6.641 1.00 69.48 ? 203 DOD A D1 1 HETATM 286 D D2 . DOD C 3 . ? 6.513 -10.265 -7.407 1.00 68.82 ? 203 DOD A D2 1 HETATM 287 O O . DOD C 3 . ? 0.102 -6.077 -9.012 1.00 49.03 ? 204 DOD A O 1 HETATM 288 D D1 . DOD C 3 . ? -0.140 -6.555 -8.219 1.00 50.53 ? 204 DOD A D1 1 HETATM 289 D D2 . DOD C 3 . ? -0.418 -6.485 -9.706 1.00 49.95 ? 204 DOD A D2 1 HETATM 290 O O . DOD C 3 . ? 2.040 -9.858 -13.329 1.00 38.85 ? 205 DOD A O 1 HETATM 291 D D1 . DOD C 3 . ? 2.612 -9.743 -14.088 1.00 39.47 ? 205 DOD A D1 1 HETATM 292 D D2 . DOD C 3 . ? 2.380 -10.637 -12.889 1.00 38.51 ? 205 DOD A D2 1 HETATM 293 O O . DOD C 3 . ? 16.031 -7.188 -0.068 1.00 42.67 ? 206 DOD A O 1 HETATM 294 D D1 . DOD C 3 . ? 16.507 -6.899 -0.846 1.00 44.01 ? 206 DOD A D1 1 HETATM 295 D D2 . DOD C 3 . ? 16.603 -7.840 0.336 1.00 44.02 ? 206 DOD A D2 1 HETATM 296 O O . DOD C 3 . ? 26.694 -4.266 -4.389 1.00 41.34 ? 207 DOD A O 1 HETATM 297 D D1 . DOD C 3 . ? 27.207 -3.489 -4.157 1.00 41.95 ? 207 DOD A D1 1 HETATM 298 D D2 . DOD C 3 . ? 26.651 -4.773 -3.579 1.00 42.99 ? 207 DOD A D2 1 HETATM 299 O O . DOD C 3 . ? 19.904 -3.004 -6.691 1.00 51.11 ? 208 DOD A O 1 HETATM 300 D D1 . DOD C 3 . ? 19.715 -2.118 -6.381 1.00 51.17 ? 208 DOD A D1 1 HETATM 301 D D2 . DOD C 3 . ? 19.303 -3.564 -6.199 1.00 52.33 ? 208 DOD A D2 1 HETATM 302 O O . DOD C 3 . ? 3.825 -9.987 -5.587 1.00 41.49 ? 209 DOD A O 1 HETATM 303 D D1 . DOD C 3 . ? 3.029 -9.589 -5.235 1.00 42.94 ? 209 DOD A D1 1 HETATM 304 D D2 . DOD C 3 . ? 3.799 -10.892 -5.276 1.00 42.06 ? 209 DOD A D2 1 HETATM 305 O O . DOD C 3 . ? 5.068 -10.459 -9.521 0.50 34.57 ? 210 DOD A O 1 HETATM 306 D D1 . DOD C 3 . ? 5.021 -11.394 -9.321 0.50 34.23 ? 210 DOD A D1 1 HETATM 307 D D2 . DOD C 3 . ? 4.869 -10.027 -8.691 0.50 33.71 ? 210 DOD A D2 1 HETATM 308 O O . DOD C 3 . ? -3.693 -16.146 -7.693 1.00 58.60 ? 211 DOD A O 1 HETATM 309 D D1 . DOD C 3 . ? -3.758 -17.035 -7.343 1.00 59.24 ? 211 DOD A D1 1 HETATM 310 D D2 . DOD C 3 . ? -4.372 -16.104 -8.366 1.00 58.88 ? 211 DOD A D2 1 HETATM 311 O O . DOD C 3 . ? -3.090 -4.429 -5.928 1.00 59.16 ? 212 DOD A O 1 HETATM 312 D D1 . DOD C 3 . ? -2.949 -5.359 -5.748 1.00 59.44 ? 212 DOD A D1 1 HETATM 313 D D2 . DOD C 3 . ? -3.323 -4.053 -5.079 1.00 58.47 ? 212 DOD A D2 1 HETATM 314 O O . DOD C 3 . ? 5.871 -10.091 -3.066 1.00 52.99 ? 213 DOD A O 1 HETATM 315 D D1 . DOD C 3 . ? 6.068 -11.025 -3.141 1.00 52.92 ? 213 DOD A D1 1 HETATM 316 D D2 . DOD C 3 . ? 6.697 -9.694 -2.790 1.00 53.35 ? 213 DOD A D2 1 HETATM 317 O O . DOD C 3 . ? 21.060 -4.930 1.203 0.50 32.75 ? 214 DOD A O 1 HETATM 318 D D1 . DOD C 3 . ? 21.023 -4.771 2.146 0.50 33.41 ? 214 DOD A D1 1 HETATM 319 D D2 . DOD C 3 . ? 21.468 -4.142 0.843 0.50 32.88 ? 214 DOD A D2 1 HETATM 320 O O . DOD C 3 . ? 13.492 -10.268 1.239 1.00 52.94 ? 215 DOD A O 1 HETATM 321 D D1 . DOD C 3 . ? 12.704 -10.687 1.586 1.00 52.26 ? 215 DOD A D1 1 HETATM 322 D D2 . DOD C 3 . ? 13.283 -10.084 0.323 1.00 53.37 ? 215 DOD A D2 1 HETATM 323 O O . DOD C 3 . ? 1.497 -8.595 -4.764 1.00 42.72 ? 216 DOD A O 1 HETATM 324 D D1 . DOD C 3 . ? 1.287 -8.488 -3.836 1.00 43.82 ? 216 DOD A D1 1 HETATM 325 D D2 . DOD C 3 . ? 0.693 -8.351 -5.222 1.00 43.66 ? 216 DOD A D2 1 HETATM 326 O O . DOD C 3 . ? 18.147 0.501 -6.316 1.00 61.62 ? 217 DOD A O 1 HETATM 327 D D1 . DOD C 3 . ? 18.417 0.150 -5.468 1.00 61.92 ? 217 DOD A D1 1 HETATM 328 D D2 . DOD C 3 . ? 18.047 1.440 -6.165 1.00 61.36 ? 217 DOD A D2 1 HETATM 329 O O . DOD C 3 . ? 11.944 -7.937 -0.656 1.00 47.98 ? 218 DOD A O 1 HETATM 330 D D1 . DOD C 3 . ? 11.986 -8.893 -0.621 1.00 48.19 ? 218 DOD A D1 1 HETATM 331 D D2 . DOD C 3 . ? 11.009 -7.737 -0.598 1.00 48.01 ? 218 DOD A D2 1 HETATM 332 O O . DOD C 3 . ? 17.369 -9.292 1.200 1.00 41.78 ? 219 DOD A O 1 HETATM 333 D D1 . DOD C 3 . ? 16.852 -9.830 1.799 1.00 42.90 ? 219 DOD A D1 1 HETATM 334 D D2 . DOD C 3 . ? 18.276 -9.539 1.378 1.00 41.29 ? 219 DOD A D2 1 HETATM 335 O O . DOD C 3 . ? 3.835 -9.570 -1.668 0.50 25.63 ? 220 DOD A O 1 HETATM 336 D D1 . DOD C 3 . ? 3.091 -9.651 -2.265 0.50 26.05 ? 220 DOD A D1 1 HETATM 337 D D2 . DOD C 3 . ? 4.558 -9.999 -2.126 0.50 25.25 ? 220 DOD A D2 1 HETATM 338 O O . DOD C 3 . ? 0.977 -10.062 2.767 1.00 53.04 ? 221 DOD A O 1 HETATM 339 D D1 . DOD C 3 . ? 0.943 -10.200 1.819 1.00 52.21 ? 221 DOD A D1 1 HETATM 340 D D2 . DOD C 3 . ? 0.316 -10.657 3.119 1.00 53.01 ? 221 DOD A D2 1 HETATM 341 O O . DOD C 3 . ? -0.037 -17.064 -3.686 1.00 60.04 ? 222 DOD A O 1 HETATM 342 D D1 . DOD C 3 . ? 0.401 -17.556 -4.379 1.00 59.46 ? 222 DOD A D1 1 HETATM 343 D D2 . DOD C 3 . ? 0.187 -16.149 -3.862 1.00 60.33 ? 222 DOD A D2 1 HETATM 344 O O . DOD C 3 . ? 7.520 -8.502 -5.316 0.50 47.20 ? 223 DOD A O 1 HETATM 345 D D1 . DOD C 3 . ? 7.596 -8.923 -6.173 0.50 47.33 ? 223 DOD A D1 1 HETATM 346 D D2 . DOD C 3 . ? 8.299 -7.950 -5.250 0.50 47.44 ? 223 DOD A D2 1 HETATM 347 O O . DOD C 3 . ? 13.760 -6.480 -0.024 1.00 56.83 ? 224 DOD A O 1 HETATM 348 D D1 . DOD C 3 . ? 13.265 -7.300 -0.021 1.00 57.30 ? 224 DOD A D1 1 HETATM 349 D D2 . DOD C 3 . ? 14.664 -6.744 0.151 1.00 57.32 ? 224 DOD A D2 1 HETATM 350 O O . DOD C 3 . ? 19.053 -6.262 0.803 1.00 60.06 ? 225 DOD A O 1 HETATM 351 D D1 . DOD C 3 . ? 19.513 -5.423 0.859 1.00 60.57 ? 225 DOD A D1 1 HETATM 352 D D2 . DOD C 3 . ? 19.616 -6.877 1.274 1.00 59.85 ? 225 DOD A D2 1 HETATM 353 O O . DOD C 3 . ? 8.675 -7.245 -2.161 0.50 38.07 ? 226 DOD A O 1 HETATM 354 D D1 . DOD C 3 . ? 8.186 -8.062 -2.248 0.50 37.37 ? 226 DOD A D1 1 HETATM 355 D D2 . DOD C 3 . ? 8.248 -6.643 -2.772 0.50 37.49 ? 226 DOD A D2 1 HETATM 356 O O . DOD C 3 . ? 3.538 -9.134 -11.558 1.00 56.28 ? 227 DOD A O 1 HETATM 357 D D1 . DOD C 3 . ? 2.832 -9.196 -12.201 1.00 55.78 ? 227 DOD A D1 1 HETATM 358 D D2 . DOD C 3 . ? 3.402 -8.287 -11.134 1.00 56.15 ? 227 DOD A D2 1 HETATM 359 O O . DOD C 3 . ? 4.563 -7.570 -3.408 0.50 21.64 ? 228 DOD A O 1 HETATM 360 D D1 . DOD C 3 . ? 3.844 -7.134 -3.864 0.50 19.75 ? 228 DOD A D1 1 HETATM 361 D D2 . DOD C 3 . ? 4.150 -7.987 -2.651 0.50 19.53 ? 228 DOD A D2 1 HETATM 362 O O . DOD C 3 . ? 4.899 -7.660 -6.720 1.00 90.11 ? 229 DOD A O 1 HETATM 363 D D1 . DOD C 3 . ? 5.177 -8.052 -7.548 1.00 90.08 ? 229 DOD A D1 1 HETATM 364 D D2 . DOD C 3 . ? 4.794 -6.729 -6.917 1.00 90.31 ? 229 DOD A D2 1 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DG 1 1 1 DG GUA A . n A 1 2 DT 2 2 2 DT THY A . n A 1 3 DG 3 3 3 DG GUA A . n A 1 4 DG 4 4 4 DG GUA A . n A 1 5 CSL 5 5 5 CSL SEC A . n A 1 6 DC 6 6 6 DC CYT A . n A 1 7 DA 7 7 7 DA ADE A . n A 1 8 DC 8 8 8 DC CYT A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MG 1 101 11 MG MG A . C 3 DOD 1 201 1017 DOD DOD A . C 3 DOD 2 202 1024 DOD DOD A . C 3 DOD 3 203 1005 DOD DOD A . C 3 DOD 4 204 1016 DOD DOD A . C 3 DOD 5 205 1020 DOD DOD A . C 3 DOD 6 206 1011 DOD DOD A . C 3 DOD 7 207 1012 DOD DOD A . C 3 DOD 8 208 1015 DOD DOD A . C 3 DOD 9 209 1004 DOD DOD A . C 3 DOD 10 210 1021 DOD DOD A . C 3 DOD 11 211 1014 DOD DOD A . C 3 DOD 12 212 1023 DOD DOD A . C 3 DOD 13 213 1001 DOD DOD A . C 3 DOD 14 214 1013 DOD DOD A . C 3 DOD 15 215 1022 DOD DOD A . C 3 DOD 16 216 1007 DOD DOD A . C 3 DOD 17 217 1027 DOD DOD A . C 3 DOD 18 218 1019 DOD DOD A . C 3 DOD 19 219 1009 DOD DOD A . C 3 DOD 20 220 1006 DOD DOD A . C 3 DOD 21 221 1010 DOD DOD A . C 3 DOD 22 222 1008 DOD DOD A . C 3 DOD 23 223 1025 DOD DOD A . C 3 DOD 24 224 1018 DOD DOD A . C 3 DOD 25 225 1029 DOD DOD A . C 3 DOD 26 226 1026 DOD DOD A . C 3 DOD 27 227 1028 DOD DOD A . C 3 DOD 28 228 1002 DOD DOD A . C 3 DOD 29 229 1003 DOD DOD A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 9080 ? 1 MORE -28 ? 1 'SSA (A^2)' 3250 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 8_554 -y,-x,-z-1/2 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 -12.2050000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O ? C DOD . ? A DOD 203 ? 1_555 MG ? B MG . ? A MG 101 ? 1_555 O ? C DOD . ? A DOD 209 ? 1_555 77.8 ? 2 O ? C DOD . ? A DOD 203 ? 1_555 MG ? B MG . ? A MG 101 ? 1_555 O ? C DOD . ? A DOD 213 ? 1_555 101.9 ? 3 O ? C DOD . ? A DOD 209 ? 1_555 MG ? B MG . ? A MG 101 ? 1_555 O ? C DOD . ? A DOD 213 ? 1_555 105.1 ? 4 O ? C DOD . ? A DOD 203 ? 1_555 MG ? B MG . ? A MG 101 ? 1_555 O ? C DOD . ? A DOD 223 ? 1_555 71.1 ? 5 O ? C DOD . ? A DOD 209 ? 1_555 MG ? B MG . ? A MG 101 ? 1_555 O ? C DOD . ? A DOD 223 ? 1_555 146.4 ? 6 O ? C DOD . ? A DOD 213 ? 1_555 MG ? B MG . ? A MG 101 ? 1_555 O ? C DOD . ? A DOD 223 ? 1_555 93.7 ? 7 O ? C DOD . ? A DOD 203 ? 1_555 MG ? B MG . ? A MG 101 ? 1_555 O ? C DOD . ? A DOD 228 ? 1_555 177.2 ? 8 O ? C DOD . ? A DOD 209 ? 1_555 MG ? B MG . ? A MG 101 ? 1_555 O ? C DOD . ? A DOD 228 ? 1_555 104.0 ? 9 O ? C DOD . ? A DOD 213 ? 1_555 MG ? B MG . ? A MG 101 ? 1_555 O ? C DOD . ? A DOD 228 ? 1_555 79.8 ? 10 O ? C DOD . ? A DOD 223 ? 1_555 MG ? B MG . ? A MG 101 ? 1_555 O ? C DOD . ? A DOD 228 ? 1_555 106.7 ? 11 O ? C DOD . ? A DOD 203 ? 1_555 MG ? B MG . ? A MG 101 ? 1_555 O ? C DOD . ? A DOD 229 ? 1_555 86.7 ? 12 O ? C DOD . ? A DOD 209 ? 1_555 MG ? B MG . ? A MG 101 ? 1_555 O ? C DOD . ? A DOD 229 ? 1_555 81.1 ? 13 O ? C DOD . ? A DOD 213 ? 1_555 MG ? B MG . ? A MG 101 ? 1_555 O ? C DOD . ? A DOD 229 ? 1_555 170.2 ? 14 O ? C DOD . ? A DOD 223 ? 1_555 MG ? B MG . ? A MG 101 ? 1_555 O ? C DOD . ? A DOD 229 ? 1_555 84.5 ? 15 O ? C DOD . ? A DOD 228 ? 1_555 MG ? B MG . ? A MG 101 ? 1_555 O ? C DOD . ? A DOD 229 ? 1_555 91.5 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2018-10-17 2 'Structure model' 1 1 2018-12-19 3 'Structure model' 1 2 2019-04-17 4 'Structure model' 2 0 2022-03-02 5 'Structure model' 2 1 2023-10-04 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 3 'Structure model' 'Author supporting evidence' 4 3 'Structure model' 'Data collection' 5 4 'Structure model' Advisory 6 4 'Structure model' 'Data collection' 7 4 'Structure model' 'Database references' 8 4 'Structure model' 'Derived calculations' 9 4 'Structure model' 'Polymer sequence' 10 4 'Structure model' 'Refinement description' 11 4 'Structure model' 'Structure summary' 12 5 'Structure model' 'Data collection' 13 5 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 3 'Structure model' pdbx_audit_support 3 4 'Structure model' database_2 4 4 'Structure model' diffrn_radiation_wavelength 5 4 'Structure model' diffrn_source 6 4 'Structure model' entity 7 4 'Structure model' entity_poly 8 4 'Structure model' pdbx_struct_conn_angle 9 4 'Structure model' pdbx_unobs_or_zero_occ_atoms 10 4 'Structure model' refine_hist 11 4 'Structure model' struct_conn 12 5 'Structure model' chem_comp_atom 13 5 'Structure model' chem_comp_bond 14 5 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.journal_volume' 2 2 'Structure model' '_citation.page_first' 3 4 'Structure model' '_database_2.pdbx_DOI' 4 4 'Structure model' '_database_2.pdbx_database_accession' 5 4 'Structure model' '_diffrn_source.pdbx_synchrotron_beamline' 6 4 'Structure model' '_diffrn_source.pdbx_synchrotron_site' 7 4 'Structure model' '_entity.formula_weight' 8 4 'Structure model' '_entity_poly.type' 9 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 10 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 11 4 'Structure model' '_pdbx_struct_conn_angle.value' 12 4 'Structure model' '_refine_hist.d_res_low' 13 4 'Structure model' '_struct_conn.pdbx_dist_value' 14 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? nCNS ? ? ? 1.0.0 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? HKL-3000 ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? HKL-3000 ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 4 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? LAUEGEN ? ? ? . 5 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? LSCALE ? ? ? . 6 ? phasing ? ? ? ? ? ? ? ? ? ? ? CNS ? ? ? . 7 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A DOD 206 ? ? D2 A DOD 224 ? ? 1.45 2 1 O A DOD 205 ? ? D1 A DOD 227 ? ? 1.53 3 1 O A DOD 218 ? ? D1 A DOD 224 ? ? 1.60 4 1 O6 A DG 1 ? ? D2 A DOD 202 ? ? 1.60 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal CSL P P N N 1 CSL O2P O N N 2 CSL O1P O N N 3 CSL "O5'" O N N 4 CSL "C5'" C N N 5 CSL "C4'" C N R 6 CSL "O4'" O N N 7 CSL "C1'" C N R 8 CSL N1 N N N 9 CSL C2 C N N 10 CSL O2 O N N 11 CSL N3 N N N 12 CSL C4 C N N 13 CSL N4 N N N 14 CSL C5 C N N 15 CSL C6 C N N 16 CSL "C2'" C N R 17 CSL "SE2'" SE N N 18 CSL "CA'" C N N 19 CSL "C3'" C N R 20 CSL "O3'" O N N 21 CSL O3P O N N 22 CSL HOP2 H N N 23 CSL "H5'1" H N N 24 CSL "H5'2" H N N 25 CSL "H4'" H N N 26 CSL "H1'" H N N 27 CSL HN41 H N N 28 CSL HN42 H N N 29 CSL H5 H N N 30 CSL H6 H N N 31 CSL "H2'" H N N 32 CSL "HA'1" H N N 33 CSL "HA'2" H N N 34 CSL "HA'3" H N N 35 CSL "H3'" H N N 36 CSL H3T H N N 37 CSL HOP3 H N N 38 DA OP3 O N N 39 DA P P N N 40 DA OP1 O N N 41 DA OP2 O N N 42 DA "O5'" O N N 43 DA "C5'" C N N 44 DA "C4'" C N R 45 DA "O4'" O N N 46 DA "C3'" C N S 47 DA "O3'" O N N 48 DA "C2'" C N N 49 DA "C1'" C N R 50 DA N9 N Y N 51 DA C8 C Y N 52 DA N7 N Y N 53 DA C5 C Y N 54 DA C6 C Y N 55 DA N6 N N N 56 DA N1 N Y N 57 DA C2 C Y N 58 DA N3 N Y N 59 DA C4 C Y N 60 DA HOP3 H N N 61 DA HOP2 H N N 62 DA "H5'" H N N 63 DA "H5''" H N N 64 DA "H4'" H N N 65 DA "H3'" H N N 66 DA "HO3'" H N N 67 DA "H2'" H N N 68 DA "H2''" H N N 69 DA "H1'" H N N 70 DA H8 H N N 71 DA H61 H N N 72 DA H62 H N N 73 DA H2 H N N 74 DC OP3 O N N 75 DC P P N N 76 DC OP1 O N N 77 DC OP2 O N N 78 DC "O5'" O N N 79 DC "C5'" C N N 80 DC "C4'" C N R 81 DC "O4'" O N N 82 DC "C3'" C N S 83 DC "O3'" O N N 84 DC "C2'" C N N 85 DC "C1'" C N R 86 DC N1 N N N 87 DC C2 C N N 88 DC O2 O N N 89 DC N3 N N N 90 DC C4 C N N 91 DC N4 N N N 92 DC C5 C N N 93 DC C6 C N N 94 DC HOP3 H N N 95 DC HOP2 H N N 96 DC "H5'" H N N 97 DC "H5''" H N N 98 DC "H4'" H N N 99 DC "H3'" H N N 100 DC "HO3'" H N N 101 DC "H2'" H N N 102 DC "H2''" H N N 103 DC "H1'" H N N 104 DC H41 H N N 105 DC H42 H N N 106 DC H5 H N N 107 DC H6 H N N 108 DG OP3 O N N 109 DG P P N N 110 DG OP1 O N N 111 DG OP2 O N N 112 DG "O5'" O N N 113 DG "C5'" C N N 114 DG "C4'" C N R 115 DG "O4'" O N N 116 DG "C3'" C N S 117 DG "O3'" O N N 118 DG "C2'" C N N 119 DG "C1'" C N R 120 DG N9 N Y N 121 DG C8 C Y N 122 DG N7 N Y N 123 DG C5 C Y N 124 DG C6 C N N 125 DG O6 O N N 126 DG N1 N N N 127 DG C2 C N N 128 DG N2 N N N 129 DG N3 N N N 130 DG C4 C Y N 131 DG HOP3 H N N 132 DG HOP2 H N N 133 DG "H5'" H N N 134 DG "H5''" H N N 135 DG "H4'" H N N 136 DG "H3'" H N N 137 DG "HO3'" H N N 138 DG "H2'" H N N 139 DG "H2''" H N N 140 DG "H1'" H N N 141 DG H8 H N N 142 DG H1 H N N 143 DG H21 H N N 144 DG H22 H N N 145 DOD O O N N 146 DOD D1 D N N 147 DOD D2 D N N 148 DT OP3 O N N 149 DT P P N N 150 DT OP1 O N N 151 DT OP2 O N N 152 DT "O5'" O N N 153 DT "C5'" C N N 154 DT "C4'" C N R 155 DT "O4'" O N N 156 DT "C3'" C N S 157 DT "O3'" O N N 158 DT "C2'" C N N 159 DT "C1'" C N R 160 DT N1 N N N 161 DT C2 C N N 162 DT O2 O N N 163 DT N3 N N N 164 DT C4 C N N 165 DT O4 O N N 166 DT C5 C N N 167 DT C7 C N N 168 DT C6 C N N 169 DT HOP3 H N N 170 DT HOP2 H N N 171 DT "H5'" H N N 172 DT "H5''" H N N 173 DT "H4'" H N N 174 DT "H3'" H N N 175 DT "HO3'" H N N 176 DT "H2'" H N N 177 DT "H2''" H N N 178 DT "H1'" H N N 179 DT H3 H N N 180 DT H71 H N N 181 DT H72 H N N 182 DT H73 H N N 183 DT H6 H N N 184 MG MG MG N N 185 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal CSL P O2P sing N N 1 CSL P O1P doub N N 2 CSL P "O5'" sing N N 3 CSL P O3P sing N N 4 CSL O2P HOP2 sing N N 5 CSL "O5'" "C5'" sing N N 6 CSL "C5'" "C4'" sing N N 7 CSL "C5'" "H5'1" sing N N 8 CSL "C5'" "H5'2" sing N N 9 CSL "C4'" "O4'" sing N N 10 CSL "C4'" "C3'" sing N N 11 CSL "C4'" "H4'" sing N N 12 CSL "O4'" "C1'" sing N N 13 CSL "C1'" N1 sing N N 14 CSL "C1'" "C2'" sing N N 15 CSL "C1'" "H1'" sing N N 16 CSL N1 C2 sing N N 17 CSL N1 C6 sing N N 18 CSL C2 O2 doub N N 19 CSL C2 N3 sing N N 20 CSL N3 C4 doub N N 21 CSL C4 N4 sing N N 22 CSL C4 C5 sing N N 23 CSL N4 HN41 sing N N 24 CSL N4 HN42 sing N N 25 CSL C5 C6 doub N N 26 CSL C5 H5 sing N N 27 CSL C6 H6 sing N N 28 CSL "C2'" "SE2'" sing N N 29 CSL "C2'" "C3'" sing N N 30 CSL "C2'" "H2'" sing N N 31 CSL "SE2'" "CA'" sing N N 32 CSL "CA'" "HA'1" sing N N 33 CSL "CA'" "HA'2" sing N N 34 CSL "CA'" "HA'3" sing N N 35 CSL "C3'" "O3'" sing N N 36 CSL "C3'" "H3'" sing N N 37 CSL "O3'" H3T sing N N 38 CSL O3P HOP3 sing N N 39 DA OP3 P sing N N 40 DA OP3 HOP3 sing N N 41 DA P OP1 doub N N 42 DA P OP2 sing N N 43 DA P "O5'" sing N N 44 DA OP2 HOP2 sing N N 45 DA "O5'" "C5'" sing N N 46 DA "C5'" "C4'" sing N N 47 DA "C5'" "H5'" sing N N 48 DA "C5'" "H5''" sing N N 49 DA "C4'" "O4'" sing N N 50 DA "C4'" "C3'" sing N N 51 DA "C4'" "H4'" sing N N 52 DA "O4'" "C1'" sing N N 53 DA "C3'" "O3'" sing N N 54 DA "C3'" "C2'" sing N N 55 DA "C3'" "H3'" sing N N 56 DA "O3'" "HO3'" sing N N 57 DA "C2'" "C1'" sing N N 58 DA "C2'" "H2'" sing N N 59 DA "C2'" "H2''" sing N N 60 DA "C1'" N9 sing N N 61 DA "C1'" "H1'" sing N N 62 DA N9 C8 sing Y N 63 DA N9 C4 sing Y N 64 DA C8 N7 doub Y N 65 DA C8 H8 sing N N 66 DA N7 C5 sing Y N 67 DA C5 C6 sing Y N 68 DA C5 C4 doub Y N 69 DA C6 N6 sing N N 70 DA C6 N1 doub Y N 71 DA N6 H61 sing N N 72 DA N6 H62 sing N N 73 DA N1 C2 sing Y N 74 DA C2 N3 doub Y N 75 DA C2 H2 sing N N 76 DA N3 C4 sing Y N 77 DC OP3 P sing N N 78 DC OP3 HOP3 sing N N 79 DC P OP1 doub N N 80 DC P OP2 sing N N 81 DC P "O5'" sing N N 82 DC OP2 HOP2 sing N N 83 DC "O5'" "C5'" sing N N 84 DC "C5'" "C4'" sing N N 85 DC "C5'" "H5'" sing N N 86 DC "C5'" "H5''" sing N N 87 DC "C4'" "O4'" sing N N 88 DC "C4'" "C3'" sing N N 89 DC "C4'" "H4'" sing N N 90 DC "O4'" "C1'" sing N N 91 DC "C3'" "O3'" sing N N 92 DC "C3'" "C2'" sing N N 93 DC "C3'" "H3'" sing N N 94 DC "O3'" "HO3'" sing N N 95 DC "C2'" "C1'" sing N N 96 DC "C2'" "H2'" sing N N 97 DC "C2'" "H2''" sing N N 98 DC "C1'" N1 sing N N 99 DC "C1'" "H1'" sing N N 100 DC N1 C2 sing N N 101 DC N1 C6 sing N N 102 DC C2 O2 doub N N 103 DC C2 N3 sing N N 104 DC N3 C4 doub N N 105 DC C4 N4 sing N N 106 DC C4 C5 sing N N 107 DC N4 H41 sing N N 108 DC N4 H42 sing N N 109 DC C5 C6 doub N N 110 DC C5 H5 sing N N 111 DC C6 H6 sing N N 112 DG OP3 P sing N N 113 DG OP3 HOP3 sing N N 114 DG P OP1 doub N N 115 DG P OP2 sing N N 116 DG P "O5'" sing N N 117 DG OP2 HOP2 sing N N 118 DG "O5'" "C5'" sing N N 119 DG "C5'" "C4'" sing N N 120 DG "C5'" "H5'" sing N N 121 DG "C5'" "H5''" sing N N 122 DG "C4'" "O4'" sing N N 123 DG "C4'" "C3'" sing N N 124 DG "C4'" "H4'" sing N N 125 DG "O4'" "C1'" sing N N 126 DG "C3'" "O3'" sing N N 127 DG "C3'" "C2'" sing N N 128 DG "C3'" "H3'" sing N N 129 DG "O3'" "HO3'" sing N N 130 DG "C2'" "C1'" sing N N 131 DG "C2'" "H2'" sing N N 132 DG "C2'" "H2''" sing N N 133 DG "C1'" N9 sing N N 134 DG "C1'" "H1'" sing N N 135 DG N9 C8 sing Y N 136 DG N9 C4 sing Y N 137 DG C8 N7 doub Y N 138 DG C8 H8 sing N N 139 DG N7 C5 sing Y N 140 DG C5 C6 sing N N 141 DG C5 C4 doub Y N 142 DG C6 O6 doub N N 143 DG C6 N1 sing N N 144 DG N1 C2 sing N N 145 DG N1 H1 sing N N 146 DG C2 N2 sing N N 147 DG C2 N3 doub N N 148 DG N2 H21 sing N N 149 DG N2 H22 sing N N 150 DG N3 C4 sing N N 151 DOD O D1 sing N N 152 DOD O D2 sing N N 153 DT OP3 P sing N N 154 DT OP3 HOP3 sing N N 155 DT P OP1 doub N N 156 DT P OP2 sing N N 157 DT P "O5'" sing N N 158 DT OP2 HOP2 sing N N 159 DT "O5'" "C5'" sing N N 160 DT "C5'" "C4'" sing N N 161 DT "C5'" "H5'" sing N N 162 DT "C5'" "H5''" sing N N 163 DT "C4'" "O4'" sing N N 164 DT "C4'" "C3'" sing N N 165 DT "C4'" "H4'" sing N N 166 DT "O4'" "C1'" sing N N 167 DT "C3'" "O3'" sing N N 168 DT "C3'" "C2'" sing N N 169 DT "C3'" "H3'" sing N N 170 DT "O3'" "HO3'" sing N N 171 DT "C2'" "C1'" sing N N 172 DT "C2'" "H2'" sing N N 173 DT "C2'" "H2''" sing N N 174 DT "C1'" N1 sing N N 175 DT "C1'" "H1'" sing N N 176 DT N1 C2 sing N N 177 DT N1 C6 sing N N 178 DT C2 O2 doub N N 179 DT C2 N3 sing N N 180 DT N3 C4 sing N N 181 DT N3 H3 sing N N 182 DT C4 O4 doub N N 183 DT C4 C5 sing N N 184 DT C5 C7 sing N N 185 DT C5 C6 doub N N 186 DT C7 H71 sing N N 187 DT C7 H72 sing N N 188 DT C7 H73 sing N N 189 DT C6 H6 sing N N 190 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'MAGNESIUM ION' MG 3 water DOD # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 4FP6 _pdbx_initial_refinement_model.details ? # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support none _pdbx_struct_assembly_auth_evidence.details ? # loop_ _refine_funct_minimized.pdbx_refine_id _refine_funct_minimized.type 'X-RAY DIFFRACTION' 'Joint X-ray/neutron ML' 'NEUTRON DIFFRACTION' 'Joint X-ray/neutron ML' #