Deprecated services

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The table below lists all the deprecated search services and the replacement service that should be used in place of the old service.

Service name Replacement service Description
PDBeView The new search box at the top of the page Text based and advanced PDB searching tool
PDBstatus The new search box at the top of the page Search system to query status of PDB entries
Gene ontology browser The new search box at the top of the page Browse, list and analyse the structural knowledge embodied in the PDB based on gene ontology
Enzyme browser The new search box at the top of the page Browse, list and analyse the structural knowledge embodied in the PDB based on enzyme classification
Structure folds browser The new search box at the top of the page Browse, list and analyse the structural knowledge embodied in the PDB based on structure folds in CATH database
Protein families browser The new search box at the top of the page Browse, list and analyse the structural knowledge embodied in the PDB based on protein family data from Pfam database
Taxonomy browser The new search box at the top of the page Browse, list and analyse the structural knowledge embodied in the PDB based on taxonomy data from NCBI taxonomy database
Compound browser The new search box at the top of the page Browse, list and analyse the structural knowledge embodied in the PDB based on chemical component data inthe PDB
PDBeLite
Retired service
Not supported please use the search box at the top of this page Search system based on the relational database
PQS-Quick
Retired service
Not supported please use Quaternary structure service A simple protein quaternary structure search
PDBeMapQuick
Retired service
The new search box at the top of the page or the PDBe API Quick access to cross-reference information to external databases based on PDB id
Search OCA
Deprecated service
Not supported please use the search box at the top of this page OCA form-based system for searching PDB
PDBeTemplate
Retired service
Not supported Local residue interactions in the PDB
PDBeAnalysis
Retired service
Not supported Validation and analysis of PDBe data
NMR Representative
Retired service
Not supported Representative model from NMR ensemble
Olderado
Retired service
Not supported
Clustering information for NMR entries in the PDB
LeView
Retired service
Not supported 2D representations of ligands and their environments and binding interactions for PDB entries

Analysis
Retired service

Not supported Validation and analysis of PDBe data
Connect
Retired service
Not supported  Query system to access to covalently connected residue pairs
PDBeDatabase
Retired service
Not supported  Direct SQL based query access to PDBe database
Select
Retired service
 Not supported  
Statistics
Retired service
Not supported  
Template
Retired service
Not supported  Local residue interactions in the PDB
Validate
Retired service
Not supported  

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