› 6w46

X-ray diffraction
1.25Å resolution

Valine-Containing Collagen Peptide

Released:
DOI: 10.2210/pdb6w46/pdb
PDB entry 6w46 coloured by chain, front view.
PDB entry 6w46 coloured by chain, side view.
PDB entry 6w46 coloured by chain, top view.
Source organism: synthetic construct
Primary publication:
Rules for the design of aza-glycine stabilized triple-helical collagen peptides.
Melton SD, Brackhahn EAE, Orlin SJ, Jin P, Chenoweth DM
Chem Sci 11 10638-10646 (2020)
PMID: 34094319

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
homo trimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-167684 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Collagen-like peptide Chains: A, B, C
Molecule details ›
Chains: A, B, C
Length: 31 amino acids
Theoretical weight: 2.85 KDa
Source organism: synthetic construct
Expression system: Not provided

Ligands and Environments

1 bound ligand:
Ligand EDO 4 x EDO
2 modified residues:
Ligand HYP 27 x HYP
Ligand GLZ 3 x GLZ

Experiments and Validation Details

Entry percentile scores
X-ray source: NSLS-II BEAMLINE 17-ID-1
Spacegroup: P21
Unit cell:
a: 37.3Å b: 19.68Å c: 40.81Å
α: 90° β: 93.26° γ: 90°
R-values:
R R work R free
0.192 0.187 0.227
Expression system: Not provided

Quick links

Citations

1 citations in other articles

Next-Generation Sequencing (NGS) Analysis Illustrates the Phenotypic Variability of Collagen Type IV Nephropathies.
Zacchia et al. (2023)

1 mention without citation

Rules for the design of aza-glycine stabilized triple-helical collagen peptides.
Melton et al. (2020)