5v7v

Electron Microscopy
3.9Å resolution

Cryo-EM structure of ERAD-associated E3 ubiquitin-protein ligase component HRD3

Released:

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
monomeric (preferred)
PDBe Complex ID:
PDB-CPX-170248 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecules (2 distinct):
ERAD-associated E3 ubiquitin-protein ligase component HRD3 Chain: A
Molecule details ›
Chain: A
Length: 818 amino acids
Theoretical weight: 93.76 KDa
Source organism: Saccharomyces cerevisiae S288C
Expression system: Saccharomyces cerevisiae
UniProt:
  • Canonical: Q05787 (Residues: 1-767; Coverage: 92%)
Gene names: HRD3, YLR207W
Sequence domains: Sel1 repeat

Ligands and Environments

Carbohydrate polymer : NEW Components: NAG, BMA
1 bound ligand:
No modified residues

Experiments and Validation Details

Entry percentile scores
Resolution: 3.9Å
Relevant EMDB volumes: EMD-8642
Expression system: Saccharomyces cerevisiae