› 5sbu

X-ray diffraction
1.04Å resolution

CD44 PanDDA analysis group deposition -- The hyaluronan-binding domain of CD44 in complex with Z839988838

Released:
DOI: 10.2210/pdb5sbu/pdb
PDB entry 5sbu coloured by chain, front view.
PDB entry 5sbu coloured by chain, side view.
PDB entry 5sbu coloured by chain, top view.
Source organism: Mus musculus
Entry authors: Bradshaw WJ, Katis VL, Bezerra GA, Koekemoer L, von Delft F, Bountra C, Brennan PE, Gileadi O

Function and Biology Details

Biochemical function:
Biological process:
Cellular component:
Sequence domains:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-147332 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
CD44 antigen Chain: A
Molecule details ›
Chain: A
Length: 152 amino acids
Theoretical weight: 16.97 KDa
Source organism: Mus musculus
Expression system: Escherichia coli
UniProt:
  • Canonical: P15379 (Residues: 23-172; Coverage: 20%)
Gene names: Cd44, Ly-24
Sequence domains: Extracellular link domain

Ligands and Environments

3 bound ligands:
Ligand 8C2 1 x 8C2
Ligand PGE 1 x PGE
Ligand DMS 2 x DMS
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: DIAMOND BEAMLINE I04-1
Spacegroup: P21
Unit cell:
a: 30.86Å b: 81.537Å c: 32.053Å
α: 90° β: 117.68° γ: 90°
R-values:
R R work R free
0.164 0.163 0.179
Expression system: Escherichia coli

Quick links