5rub Summary

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PDB entry 5rub (supersedes 2rub)

CRYSTALLOGRAPHIC REFINEMENT AND STRUCTURE OF RIBULOSE-1,5-BISPHOSPHATE CARBOXYLASE FROM RHODOSPIRILLUM RUBRUM AT 1.7 ANGSTROMS RESOLUTION

The structure was published by Schneider, G., Lindqvist, Y., and Lundqvist, T., in 1990 in a paper entitled "Crystallographic refinement and structure of ribulose-1,5-bisphosphate carboxylase from Rhodospirillum rubrum at 1.7 A resolution." (abstract).

This crystal structure was determined using X-ray diffraction at a resolution of 1.7 Å and deposited in 1990.

The experimental data on which the structure is based was not deposited.

This PDB entry contains multiple copies of the structure of RUBISCO (RIBULOSE-1,5-BISPHOSPHATE CARBOXYLASE(SLASH)OXYGENASE).

The molecule most likely forms homodimers.

The following tables show cross-reference information to other databases (to obtain a list of all PDB entries sharing the same property or classification, click on the magnifying glass icon):


Chain Name UniProt Name of source organism % of UniProt sequence present in the sample Residues in the sample molecules % of residues observed
A RUBISCO (RIBULOSE-1,5-BISPHOSPHATE CARBOXYLASE(SLASH)OXYGENASE) P04718 (1-466) (RBL2_RHORU)search Rhodospirillum rubrumsearch 100% 490 88%
B RUBISCO (RIBULOSE-1,5-BISPHOSPHATE CARBOXYLASE(SLASH)OXYGENASE) P04718 (1-466) (RBL2_RHORU)search Rhodospirillum rubrumsearch 100% 490 88%


This entry contains 1 unique UniProt protein:

UniProt accession Name Organism PDB
P04718 (1 - 466) RUBISCO (RIBULOSE-1,5-BISPHOSPHATE CARBOXYLASE(SLASH)OXYGENASE) Rhodospirillum rubrum

Chain Structural classification (SCOP) Structural classification (CATH) Sequence family (Pfam)
A, B (P04718) RuBisCo, large subunit, C-terminal domainsearch, Ribulose 1,5-bisphosphate carboxylase-oxygenasesearch Alpha-Beta Plaitssearch, Rubiscosearch PF00016: Ribulose bisphosphate carboxylase large chain, catalytic domainsearch, PF02788: Ribulose bisphosphate carboxylase large chain, N-terminal domainsearch

Chain ID Molecular function (GO) Biological process (GO)
A, B (P04718) magnesium ion bindingsearch lyase activitysearch ribulose-bisphosphate carboxylase activitysearch metal ion bindingsearch monooxygenase activitysearch oxidoreductase activitysearch carbon fixationsearch oxidation-reduction processsearch reductive pentose-phosphate cyclesearch photosynthesissearch

Chain InterPro annotation
A, B Ribulose bisphosphate carboxylase, large subunit, C-terminalsearch Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminalsearch Ribulose bisphosphate carboxylase, large subunit, N-terminalsearch Ribulose bisphosphate carboxylasesearch Ribulose bisphosphate carboxylase, large chain, active sitesearch