› 5jyi

X-ray diffraction
1.91Å resolution

Trypsin bound with succinic acid at 1.9A

Released:
DOI: 10.2210/pdb5jyi/pdb
PDB entry 5jyi coloured by chain, front view.
PDB entry 5jyi coloured by chain, side view.
PDB entry 5jyi coloured by chain, top view.
Source organism: Bos taurus
Entry authors: Manohar R, Kutumbarao NHV, KarthiK L, Malathy P, Velmurugan D, Gunasekaran K

Function and Biology Details

Reaction catalysed: 
Preferential cleavage: Arg-|-, Lys-|-.
Biochemical function:
Biological process:
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-133319 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Serine protease 1 Chain: A
Molecule details ›
Chain: A
Length: 246 amino acids
Theoretical weight: 25.81 KDa
Source organism: Bos taurus
UniProt:
  • Canonical: P00760 (Residues: 1-246; Coverage: 100%)
Gene names: PRSS1, TRP1, TRY1, TRYP1
Sequence domains: Trypsin
Structure domains: Trypsin-like serine proteases

Ligands and Environments

3 bound ligands:
Ligand CA 1 x CA
Ligand SIN 1 x SIN
Ligand NA 1 x NA
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: BRUKER AXS MICROSTAR
Spacegroup: P212121
Unit cell:
a: 46.32Å b: 53.18Å c: 76.81Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.158 0.153 0.201

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