› 5e75

X-ray diffraction
1.36Å resolution

Crystal structure of Bacova_02651

Released:
DOI: 10.2210/pdb5e75/pdb
PDB entry 5e75 coloured by chain, front view.
PDB entry 5e75 coloured by chain, side view.
PDB entry 5e75 coloured by chain, top view.
Source organism: Bacteroides ovatus ATCC 8483
Primary publication:
Molecular Dissection of Xyloglucan Recognition in a Prominent Human Gut Symbiont.
Tauzin AS, Kwiatkowski KJ, Orlovsky NI, Smith CJ, Creagh AL, Haynes CA, Wawrzak Z, Brumer H, Koropatkin NM
mBio 7 e02134-15 (2016)
PMID: 27118585

Function and Biology Details

Biochemical function:
Biological process:
Cellular component:
Sequence domains:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-108318 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
SusD-like protein BACOVA_02651 Chain: A
Molecule details ›
Chain: A
Length: 519 amino acids
Theoretical weight: 59.17 KDa
Source organism: Bacteroides ovatus ATCC 8483
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: A7LXT5 (Residues: 28-546; Coverage: 99%)
Gene name: BACOVA_02651
Sequence domains:
Structure domains: Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat

Ligands and Environments

5 bound ligands:
Ligand PEG 1 x PEG
Ligand EDO 3 x EDO
Ligand TRS 2 x TRS
Ligand MG 2 x MG
Ligand CL 2 x CL
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: APS BEAMLINE 21-ID-G
Spacegroup: P21
Unit cell:
a: 52.8Å b: 81.41Å c: 57.68Å
α: 90° β: 107.85° γ: 90°
R-values:
R R work R free
0.147 0.147 0.174
Expression system: Escherichia coli BL21(DE3)

Quick links

Citations

8 review citations

Introduction to the human gut microbiota.
Thursby et al. (2017)
7 more

1 mention without citation

Molecular Dissection of Xyloglucan Recognition in a Prominent Human Gut Symbiont.
Tauzin et al. (2016)