› 5u4a

X-ray diffraction
1.9Å resolution

Wild-type Transthyretin in complex with 5-[(1E)-2-(2-Chloro-4-boronic acid)ethenyl]-1,3-benzenediol

Released:
DOI: 10.2210/pdb5u4a/pdb
PDB entry 5u4a coloured by chain, front view.
PDB entry 5u4a coloured by chain, side view.
PDB entry 5u4a coloured by chain, top view.
Source organism: Homo sapiens
Primary publication:
Stilbene Boronic Acids Form a Covalent Bond with Human Transthyretin and Inhibit Its Aggregation.
Smith TP, Windsor IW, Forest KT, Raines RT
J Med Chem 60 7820-7834 (2017)
PMID: 28920684

Function and Biology Details

Biochemical function:
Biological process:
Cellular component:
Sequence domains:

Structure analysis Details

Assembly composition:
homo tetramer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-136168 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Transthyretin Chains: A, B
Molecule details ›
Chains: A, B
Length: 128 amino acids
Theoretical weight: 13.91 KDa
Source organism: Homo sapiens
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: P02766 (Residues: 21-147; Coverage: 100%)
Gene names: PALB, TTR
Sequence domains: HIUase/Transthyretin family

Ligands and Environments

1 bound ligand:
Ligand 7VG 2 x 7VG
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: APS BEAMLINE 21-ID-G
Spacegroup: P21212
Unit cell:
a: 42.822Å b: 84.928Å c: 64.19Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.228 0.223 0.276
Expression system: Escherichia coli BL21(DE3)

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Citations

4 review citations

Recent developments in the medicinal chemistry of single boron atom-containing compounds.
Song et al. (2021)
3 more