› 5h86

X-ray diffraction
2.08Å resolution

Human Gcn5 bound to butyryl-CoA

Released:
DOI: 10.2210/pdb5h86/pdb
PDB entry 5h86 coloured by chain, front view.
PDB entry 5h86 coloured by chain, side view.
PDB entry 5h86 coloured by chain, top view.
Source organism: Homo sapiens
Primary publication:
Structural basis for acyl-group discrimination by human Gcn5L2.
Ringel AE, Wolberger C
Acta Crystallogr D Struct Biol 72 841-8 (2016)
PMID: 27377381

Function and Biology Details

Reaction catalysed: 
Acetyl-CoA + [protein]-L-lysine = CoA + [protein]-N(6)-acetyl-L-lysine
Biochemical function:
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-187767 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Histone acetyltransferase KAT2A Chain: A
Molecule details ›
Chain: A
Length: 168 amino acids
Theoretical weight: 19.41 KDa
Source organism: Homo sapiens
Expression system: Escherichia coli
UniProt:
  • Canonical: Q92830 (Residues: 497-662; Coverage: 20%)
Gene names: GCN5, GCN5L2, KAT2A
Sequence domains: Acetyltransferase (GNAT) family
Structure domains: Aminopeptidase

Ligands and Environments


Cofactor: Ligand BCO 1 x BCO
1 bound ligand:
Ligand EDO 1 x EDO
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: RIGAKU FR-E+ SUPERBRIGHT
Spacegroup: P61
Unit cell:
a: 38.246Å b: 38.246Å c: 186.965Å
α: 90° β: 90° γ: 120°
R-values:
R R work R free
0.158 0.156 0.194
Expression system: Escherichia coli

Quick links

Citations

15 review citations

Metabolic regulation of gene expression through histone acylations.
Sabari et al. (2017)
14 more

3 mentions without citation

The Ada2/Ada3/Gcn5/Sgf29 histone acetyltransferase module.
Espinola-Lopez et al. (2021)
2 more