4v6w Summary

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PDB entry 4v6w (supersedes 3j38,3j39,3j3c,3j3e)

Structure of the D. melanogaster 80S ribosome

The structure was published by Anger, A.M., Armache, J.P., Berninghausen, O., et al., Subklewe, M., Wilson, D.N., and Beckmann, R., in 2013 in a paper entitled "Structures of the human and Drosophila 80S ribosome." (abstract).

The structure was determined using Electron microscopy at a resolution of 6.0 Å and deposited in 2013.

The experimental data on which the structure is based was deposited separately in EMDB as entry 5591.

This entry contains 86 copies of 86 unique biopolymers (complete list).

The most likely quaternary structure is a 86meric assembly.


The are more than 5 unique protein polymers in this entry. More information is available on the Uniprot cross references page.

This entry contains 79 unique UniProt proteins:

UniProt accession Name Organism PDB
P13060 (1 - 844) Elongation factor 2 Drosophila melanogaster
P41042 (1 - 261) 40S ribosomal protein S4 Drosophila melanogaster
Q9V9M7 (1 - 159) 60S ribosomal protein L21 Drosophila melanogaster
P46222 (1 - 184) 60S ribosomal protein L11 Drosophila melanogaster
O18640 (1 - 318) Guanine nucleotide-binding protein subunit beta-like protein Drosophila melanogaster
P31009 (1 - 267) 40S ribosomal protein S2 Drosophila melanogaster
Q9W3W8 (1 - 186) 60S ribosomal protein L17 Drosophila melanogaster
P50882 (1 - 190) 60S ribosomal protein L9 Drosophila melanogaster
P55828 (1 - 120) 40S ribosomal protein S20 Drosophila melanogaster
P29327 (1 - 248) 40S ribosomal protein S6 Drosophila melanogaster
P50887 (1 - 299) 60S ribosomal protein L22 Drosophila melanogaster
Q9V9W2 (1 - 243) 60S ribosomal protein L6, isoform A Drosophila melanogaster
Q9VB14 (1 - 163) 40S ribosomal protein S10a Drosophila melanogaster
Q24186 (1 - 228) 40S ribosomal protein S5a Drosophila melanogaster
Q9W0A8 (1 - 277) 60S ribosomal protein L23A Drosophila melanogaster
P46223 (1 - 271) 60S ribosomal protein L7a Drosophila melanogaster
P14130 (1 - 151) 40S ribosomal protein S14 Drosophila melanogaster
Q9VA91 (1 - 194) 40S ribosomal protein S7 Drosophila melanogaster
Q9VVU2 (1 - 149) 60S ribosomal protein L26 Drosophila melanogaster
Q8T3U2 (1 - 143) 40S ribosomal protein S23 Drosophila melanogaster
P48149 (1 - 130) 40S ribosomal protein S15Aa Drosophila melanogaster
Q9VJY6 (1 - 155) 60S ribosomal protein L24 Drosophila melanogaster
P80455 (1 - 139) 40S ribosomal protein S12 Drosophila melanogaster
Q8MLY8 (1 - 208) 40S ribosomal protein S8 Drosophila melanogaster
Q9VBN5 (1 - 135) 60S ribosomal protein L27 Drosophila melanogaster
P41094 (1 - 152) 40S ribosomal protein S18 Drosophila melanogaster
Q9W237 (1 - 148) 40S ribosomal protein S16 Drosophila melanogaster
Q9VZS5 (1 - 144) 60S ribosomal protein L28 Drosophila melanogaster
Q9VH69 (1 - 56) 40S ribosomal protein S29 Drosophila melanogaster
Q9VBX3 (139 - 256) Vig2, isoform B Drosophila melanogaster
Q9W499 (1 - 123) 60S ribosomal protein L35 Drosophila melanogaster
Q03334 (1 - 151) 40S ribosomal protein S13 Drosophila melanogaster
Q24154 (1 - 76) 60S ribosomal protein L29 Drosophila melanogaster
Q0E9B6 (1 - 155) 40S ribosomal protein S11 Drosophila melanogaster
O16797 (1 - 416) 60S ribosomal protein L3 Drosophila melanogaster
P17704 (1 - 131) 40S ribosomal protein S17 Drosophila melanogaster
Q9VTP4 (1 - 72) 60S ribosomal protein L10a-2 Drosophila melanogaster
P32100 (1 - 252) 60S ribosomal protein L7 Drosophila melanogaster
Q7JZW2 (1 - 148) 40S ribosomal protein S15, isoform A Drosophila melanogaster
Q9VJ19 (1 - 111) 60S ribosomal protein L30 Drosophila melanogaster
P39018 (1 - 156) 40S ribosomal protein S19a Drosophila melanogaster
Q9W1B9 (1 - 165) 60S ribosomal protein L12 Drosophila melanogaster
Q9V597 (1 - 124) 60S ribosomal protein L31 Drosophila melanogaster
P55830 (1 - 268) 40S ribosomal protein S3a Drosophila melanogaster
Q9VNE9 (1 - 205) 60S ribosomal protein L13a Drosophila melanogaster
P04359 (1 - 134) 60S ribosomal protein L32 Drosophila melanogaster
P38979 (1 - 313) 40S ribosomal protein SA Drosophila melanogaster
P41126 (1 - 218) 60S ribosomal protein L13 Drosophila melanogaster
Q9VNB9 (1 - 157) 60S ribosomal protein L35A Drosophila melanogaster
O76927 (1 - 83) 40S ribosomal protein S21 Drosophila melanogaster
P48159 (1 - 140) 60S ribosomal protein L23 Drosophila melanogaster
Q9VBH8 (1 - 162) 60S ribosomal protein L34a Drosophila melanogaster
Q9W229 (1 - 131) 40S ribosomal protein S24 Drosophila melanogaster
P55841 (1 - 166) 60S ribosomal protein L14 Drosophila melanogaster
P49630 (1 - 115) 60S ribosomal protein L36 Drosophila melanogaster
P48588 (1 - 117) 40S ribosomal protein S25 Drosophila melanogaster
P41092 (1 - 149) 60S ribosomal protein L27a Drosophila melanogaster
Q9VXX8 (1 - 93) 60S ribosomal protein L37-A Drosophila melanogaster
P13008 (1 - 114) 40S ribosomal protein S26 Drosophila melanogaster
O17445 (1 - 204) 60S ribosomal protein L15 Drosophila melanogaster
Q9W5N2 (1 - 70) 60S ribosomal protein L38 Drosophila melanogaster
Q9VBU9 (1 - 84) 40S ribosomal protein S27 Drosophila melanogaster
O61231 (1 - 218) 60S ribosomal protein L10 Drosophila melanogaster
O16130 (1 - 51) 60S ribosomal protein L39 Drosophila melanogaster
Q9W334 (1 - 65) 40S ribosomal protein S28 Drosophila melanogaster
Q9W5R8 (1 - 299) 60S ribosomal protein L5 Drosophila melanogaster
P09180 (1 - 401) 60S ribosomal protein L4 Drosophila melanogaster
Q06559 (1 - 246) 40S ribosomal protein S3 Drosophila melanogaster
Q9VS34 (1 - 188) 60S ribosomal protein L18 Drosophila melanogaster
P18101 (77 - 128) 60S ribosomal protein L40 Drosophila melanogaster
Q9VDH8 (1 - 132) 40S ribosomal protein S30, isoform A Drosophila melanogaster
P36241 (1 - 203) 60S ribosomal protein L19 Drosophila melanogaster
Q962S2 (1 - 25) 60S ribosomal protein L41 Drosophila melanogaster
P15357 (77 - 156) 40S ribosomal protein S27a Drosophila melanogaster
Q9V3G1 (1 - 256) 60S ribosomal protein L8 Drosophila melanogaster
Q9VMU4 (1 - 92) 60S ribosomal protein L37a Drosophila melanogaster
P55935 (1 - 195) 40S ribosomal protein S9 Drosophila melanogaster
P41093 (1 - 177) 60S ribosomal protein L18a Drosophila melanogaster
Q9VLT7 (1 - 104) 60S ribosomal protein L36A Drosophila melanogaster

For more information on cross references to other databases click Cross references in the menu on the left.