4v6m Summary

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PDB entry 4v6m (supersedes 3j00,3j01)

Structure of the ribosome-SecYE complex in the membrane environment

The structure was published by Frauenfeld, J., Gumbart, J., Sluis, E.O., et al., Becker, T., Schulten, K., and Beckmann, R., in 2011 in a paper entitled "Cryo-EM structure of the ribosome-SecYE complex in the membrane environment." (abstract).

The structure was determined using Electron microscopy at a resolution of 7.1 Å and deposited in 2011.

The experimental data on which the structure is based was deposited separately in EMDB as entry 1858.

This entry contains 193 copies of 59 unique biopolymers (complete list).

It also contains one or more heterogenic compounds (e.g., ligands, co-factors, ions, modified amino acids, etc.); see here for a complete list.

The most likely quaternary structure is a 60meric assembly.


The are more than 5 unique protein polymers in this entry. More information is available on the Uniprot cross references page.

This entry contains 52 unique UniProt proteins:

UniProt accession Name Organism PDB
P0A7M2 (2 - 78) 50S ribosomal protein L28 Escherichia coli K-12
P0A7M6 (1 - 63) 50S ribosomal protein L29 Escherichia coli K-12
Q0TCG1 (8 - 442) Preprotein translocase secY subunit Escherichia coli 536
P0AG51 (2 - 59) 50S ribosomal protein L30 Escherichia coli K-12
Q8X9Y5 (22 - 103) Cell division protein FtsQ Escherichia coli O157:H7
Q0TA84 (12 - 127) Preprotein translocase secE subunit Escherichia coli 536
P0A7N4 (2 - 57) 50S ribosomal protein L32 Escherichia coli K-12
P02647 (68 - 267) Apolipoprotein A-I Homo sapiens
P0A7L0 (1 - 234) 50S ribosomal protein L1 Escherichia coli K-12
P0A7N9 (2 - 55) 50S ribosomal protein L33 Escherichia coli K-12
P60422 (2 - 273) 50S ribosomal protein L2 Escherichia coli K-12
P0A7P5 (1 - 46) 50S ribosomal protein L34 Escherichia coli K-12
P0A7V0 (2 - 241) 30S ribosomal protein S2 Escherichia coli K-12
P60438 (1 - 209) 50S ribosomal protein L3 Escherichia coli K-12
P0A7Q1 (2 - 65) 50S ribosomal protein L35 Escherichia coli K-12
P0A7V3 (2 - 233) 30S ribosomal protein S3 Escherichia coli K-12
P60723 (1 - 201) 50S ribosomal protein L4 Escherichia coli K-12
P0A7Q6 (1 - 38) 50S ribosomal protein L36 Escherichia coli K-12
P0A7V8 (2 - 206) 30S ribosomal protein S4 Escherichia coli K-12
P62399 (2 - 179) 50S ribosomal protein L5 Escherichia coli K-12
P0A7W1 (2 - 167) 30S ribosomal protein S5 Escherichia coli K-12
P0AG55 (2 - 177) 50S ribosomal protein L6 Escherichia coli K-12
P02358 (1 - 135) 30S ribosomal protein S6 Escherichia coli K-12
P0A7R1 (1 - 149) 50S ribosomal protein L9 Escherichia coli K-12
P02359 (2 - 179) 30S ribosomal protein S7 Escherichia coli K-12
P0A7J7 (2 - 142) 50S ribosomal protein L11 Escherichia coli K-12
P0A7W7 (2 - 130) 30S ribosomal protein S8 Escherichia coli K-12
P0AA10 (1 - 142) 50S ribosomal protein L13 Escherichia coli K-12
P0A7X3 (2 - 130) 30S ribosomal protein S9 Escherichia coli K-12
P0ADY3 (1 - 123) 50S ribosomal protein L14 Escherichia coli K-12
P0A7R5 (1 - 103) 30S ribosomal protein S10 Escherichia coli K-12
P02413 (1 - 144) 50S ribosomal protein L15 Escherichia coli K-12
P0A7R9 (2 - 129) 30S ribosomal protein S11 Escherichia coli K-12
P0ADY7 (1 - 136) 50S ribosomal protein L16 Escherichia coli K-12
P0A7S3 (2 - 124) 30S ribosomal protein S12 Escherichia coli K-12
P0AG44 (1 - 127) 50S ribosomal protein L17 Escherichia coli K-12
P0C018 (1 - 117) 50S ribosomal protein L18 Escherichia coli K-12
P0AG59 (2 - 101) 30S ribosomal protein S14 Escherichia coli K-12
P0A7K6 (2 - 115) 50S ribosomal protein L19 Escherichia coli K-12
P0A7L3 (2 - 118) 50S ribosomal protein L20 Escherichia coli K-12
P0A7T3 (1 - 82) 30S ribosomal protein S16 Escherichia coli K-12
P0AG48 (1 - 103) 50S ribosomal protein L21 Escherichia coli K-12
P0AG63 (2 - 84) 30S ribosomal protein S17 Escherichia coli K-12
P61175 (1 - 110) 50S ribosomal protein L22 Escherichia coli K-12
P0A7T7 (2 - 75) 30S ribosomal protein S18 Escherichia coli K-12
P0ADZ0 (1 - 100) 50S ribosomal protein L23 Escherichia coli K-12
P0A7U3 (2 - 92) 30S ribosomal protein S19 Escherichia coli K-12
P60624 (2 - 104) 50S ribosomal protein L24 Escherichia coli K-12
P0A7U7 (2 - 87) 30S ribosomal protein S20 Escherichia coli K-12
P68919 (1 - 94) 50S ribosomal protein L25 Escherichia coli K-12
P68679 (2 - 71) 30S ribosomal protein S21 Escherichia coli K-12
P0A7L8 (2 - 85) 50S ribosomal protein L27 Escherichia coli K-12

For more information on cross references to other databases click Cross references in the menu on the left.