› 4k9z

X-ray diffraction
1.8Å resolution

Crystal structure of a putative thiol-disulfide oxidoreductase from Bacteroides vulgatus (target NYSGRC-011676), space group P6222

Released:
DOI: 10.2210/pdb4k9z/pdb
PDB entry 4k9z coloured by chain, front view.
PDB entry 4k9z coloured by chain, side view.
PDB entry 4k9z coloured by chain, top view.
Source organism: Phocaeicola vulgatus ATCC 8482
Entry authors: Vetting MW, Patskovsky Y, Toro R, Bhosle R, Hillerich B, Gizzi A, Garforth S, Kar A, Chan MK, Lafluer J, Patel H, Matikainen B, Chamala S, Lim S, Celikgil A, Villegas G, Evans B, Love J, Fiser A, Khafizov K, Seidel RD, Bonanno JB, Armstrong RN, Almo SC, New York Structural Genomics Research Consortium (NYSGRC)

Function and Biology Details

Biochemical function:
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
homo tetramer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-107878 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Thioredoxin domain-containing protein Chain: A
Molecule details ›
Chain: A
Length: 168 amino acids
Theoretical weight: 19.06 KDa
Source organism: Phocaeicola vulgatus ATCC 8482
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: A6L2G8 (Residues: 299-455; Coverage: 35%)
Gene name: BVU_2222
Sequence domains: Redoxin
Structure domains: Glutaredoxin

Ligands and Environments

1 bound ligand:
Ligand CL 1 x CL
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: NSLS BEAMLINE X29A
Spacegroup: P6222
Unit cell:
a: 60.96Å b: 60.96Å c: 173.89Å
α: 90° β: 90° γ: 120°
R-values:
R R work R free
0.202 0.2 0.247
Expression system: Escherichia coli BL21(DE3)

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