› 4h7l

X-ray diffraction
2.45Å resolution

Crystal structure of Plim_4148 protein from Planctomyces limnophilus

Released:
DOI: 10.2210/pdb4h7l/pdb
PDB entry 4h7l coloured by chain, front view.
PDB entry 4h7l coloured by chain, side view.
PDB entry 4h7l coloured by chain, top view.
Source organism: Planctopirus limnophila DSM 3776
Entry authors: Michalska K, Bigelow L, Bruno CJP, Moser C, Bearden J, Joachimiak A, Midwest Center for Structural Genomics (MCSG)

Function and Biology Details

Biochemical function:
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-112744 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Cupin 2 conserved barrel domain protein Chains: A, B
Molecule details ›
Chains: A, B
Length: 157 amino acids
Theoretical weight: 17.54 KDa
Source organism: Planctopirus limnophila DSM 3776
Expression system: Escherichia coli
UniProt:
  • Canonical: D5SZ58 (Residues: 1-154; Coverage: 100%)
Gene name: Plim_4148
Structure domains: Jelly Rolls

Ligands and Environments

1 bound ligand:
Ligand CU 2 x CU
1 modified residue:
Ligand MSE 14 x MSE

Experiments and Validation Details

Entry percentile scores
X-ray source: APS BEAMLINE 19-ID
Spacegroup: P3121
Unit cell:
a: 67.091Å b: 67.091Å c: 109.874Å
α: 90° β: 90° γ: 120°
R-values:
R R work R free
0.18 0.177 0.226
Expression system: Escherichia coli

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