› 4drp

X-ray diffraction
1.8Å resolution

Evaluation of Synthetic FK506 Analogs as Ligands for the FK506-Binding Proteins 51 and 52: Complex of FKBP51 with 2-(3-((R)-3-(3,4-dimethoxyphenyl)-1-((S)-1-(2-((1R,2S)-2-ethyl-1-hydroxy-cyclohexyl)-2-oxoacetyl)piperidine-2-carbonyloxy)propyl)phenoxy)acetic acid from cocrystallization

Released:
DOI: 10.2210/pdb4drp/pdb
PDB entry 4drp coloured by chain, front view.
PDB entry 4drp coloured by chain, side view.
PDB entry 4drp coloured by chain, top view.
Source organism: Homo sapiens
Primary publication:
Evaluation of synthetic FK506 analogues as ligands for the FK506-binding proteins 51 and 52.
Gopalakrishnan R, Kozany C, Gaali S, Kress C, Hoogeland B, Bracher A, Hausch F
J Med Chem 55 4114-22 (2012)
PMID: 22455444

Function and Biology Details

Reaction catalysed: 
Peptidylproline (omega=180) = peptidylproline (omega=0)
Biochemical function:
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-171693 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Peptidyl-prolyl cis-trans isomerase FKBP5 Chain: A
Molecule details ›
Chain: A
Length: 128 amino acids
Theoretical weight: 14.03 KDa
Source organism: Homo sapiens
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: Q13451 (Residues: 16-140; Coverage: 27%)
Gene names: AIG6, FKBP5, FKBP51
Sequence domains: FKBP-type peptidyl-prolyl cis-trans isomerase
Structure domains: Chitinase A; domain 3

Ligands and Environments

1 bound ligand:
Ligand 0MD 1 x 0MD
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: ESRF BEAMLINE ID23-1
Spacegroup: P212121
Unit cell:
a: 49.913Å b: 56.563Å c: 57.589Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.222 0.22 0.261
Expression system: Escherichia coli BL21(DE3)

Quick links

Citations

9 review citations

Is the HPA Axis as Target for Depression Outdated, or Is There a New Hope?
Menke A. (2019)
8 more

1 mention without citation

Roles of Prolyl Isomerases in RNA-Mediated Gene Expression.
Thapar R. (2015)