4yye

X-ray diffraction
2.3Å resolution

Crystal structure of the yeast mitochondrial threonyl-tRNA synthetase (MST1) in complex with the canonical tRNAThr and threonyl sulfamoyl adenylate

Released:

Function and Biology Details

Structure analysis Details

Assembly composition:
hetero tetramer (preferred)
PDBe Complex ID:
PDB-CPX-139446 (preferred)
Entry contents:
1 distinct polypeptide molecule
1 distinct RNA molecule
Macromolecules (2 distinct):
Threonine--tRNA ligase, mitochondrial Chains: A, B
Molecule details ›
Chains: A, B
Length: 460 amino acids
Theoretical weight: 53.47 KDa
Source organism: Saccharomyces cerevisiae S288C
Expression system: Escherichia coli
UniProt:
  • Canonical: P07236 (Residues: 26-462; Coverage: 95%)
Gene names: MST1, YKL194C
Sequence domains:
Structure domains:
tRNA Chains: C, D
Molecule details ›
Chains: C, D
Length: 76 nucleotides
Theoretical weight: 24.33 KDa
Source organism: Saccharomyces cerevisiae
Expression system: Not provided
Sequence domains: tRNA

Ligands and Environments

3 bound ligands:
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: APS BEAMLINE 23-ID-D
Spacegroup: P1
Unit cell:
a: 69.021Å b: 77.228Å c: 86.157Å
α: 63.86° β: 75.04° γ: 89.39°
R-values:
R R work R free
0.162 0.16 0.202
Expression systems:
  • Escherichia coli
  • Not provided