› 4q5w

X-ray diffraction
1.8Å resolution

Crystal structure of extended-Tudor 9 of Drosophila melanogaster

Released:
DOI: 10.2210/pdb4q5w/pdb
PDB entry 4q5w coloured by chain, front view.
PDB entry 4q5w coloured by chain, side view.
PDB entry 4q5w coloured by chain, top view.
Source organism: Drosophila melanogaster
Primary publication:
Structure and domain organization of Drosophila Tudor.
Ren R, Liu H, Wang W, Wang M, Yang N, Dong YH, Gong W, Lehmann R, Xu RM
Cell Res 24 1146-9 (2014)
PMID: 24810300

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domain:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-150599 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Maternal protein tudor Chains: A, B
Molecule details ›
Chains: A, B
Length: 183 amino acids
Theoretical weight: 20.79 KDa
Source organism: Drosophila melanogaster
Expression system: Escherichia coli
UniProt:
  • Canonical: P25823 (Residues: 1978-2160; Coverage: 7%)
Gene names: CG9450, tud
Sequence domains: Tudor domain
Structure domains: SH3 type barrels.

Ligands and Environments

1 bound ligand:
Ligand EPE 1 x EPE
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: BSRF BEAMLINE 1W2B
Spacegroup: P21
Unit cell:
a: 37.23Å b: 105.678Å c: 52.603Å
α: 90° β: 100.57° γ: 90°
R-values:
R R work R free
0.182 0.18 0.226
Expression system: Escherichia coli

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Citations

3 review citations

Germ Plasm Biogenesis--An Oskar-Centric Perspective.
Lehmann R. (2016)
2 more