› 4nna

X-ray diffraction
2.1Å resolution

Apo structure of ObcA

Released:
DOI: 10.2210/pdb4nna/pdb
PDB entry 4nna coloured by chain, front view.
PDB entry 4nna coloured by chain, side view.
PDB entry 4nna coloured by chain, top view.
Source organism: Burkholderia glumae BGR1
Primary publication:
Structural basis for bacterial quorum sensing-mediated oxalogenesis.
Oh J, Goo E, Hwang I, Rhee S
J Biol Chem 289 11465-11475 (2014)
PMID: 24616091

Function and Biology Details

Biochemical function:
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-111449 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Oxalate Biosynthetic Component A N-terminal domain-containing protein Chain: A
Molecule details ›
Chain: A
Length: 542 amino acids
Theoretical weight: 59.85 KDa
Source organism: Burkholderia glumae BGR1
Expression system: Escherichia coli
UniProt:
  • Canonical: C5AJX5 (Residues: 1-540; Coverage: 100%)
Gene name: bglu_2g18790
Sequence domains:
Structure domains: Aldolase class I

Ligands and Environments

1 bound ligand:
Ligand MG 1 x MG
2 modified residues:
Ligand MSE 7 x MSE
Ligand MLY 5 x MLY

Experiments and Validation Details

Entry percentile scores
X-ray source: PAL/PLS BEAMLINE 7A (6B, 6C1)
Spacegroup: P43212
Unit cell:
a: 173.548Å b: 173.548Å c: 46.249Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.2 0.198 0.237
Expression system: Escherichia coli

Quick links

Citations

1 review citation

Functional and genomic insights into the pathogenesis of Burkholderia species to rice.
Naughton et al. (2016)
5 other articles

2 mentions without citation

Structural basis for bacterial quorum sensing-mediated oxalogenesis.
Oh et al. (2014)
1 more