› 4jrl

X-ray diffraction
2.1Å resolution

Crystal structure of a putative glycoside hydrolase (BACOVA_00087) from Bacteroides ovatus ATCC 8483 at 2.10 A resolution

Released:
DOI: 10.2210/pdb4jrl/pdb
PDB entry 4jrl coloured by chain, front view.
PDB entry 4jrl coloured by chain, side view.
PDB entry 4jrl coloured by chain, top view.
Source organism: Bacteroides ovatus ATCC 8483
Entry author: Joint Center for Structural Genomics (JCSG)

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-108296 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Putative carbohydrate metabolism domain-containing protein Chain: A
Molecule details ›
Chain: A
Length: 356 amino acids
Theoretical weight: 39.84 KDa
Source organism: Bacteroides ovatus ATCC 8483
Expression system: Escherichia coli
UniProt:
  • Canonical: A7LQL7 (Residues: 21-375; Coverage: 95%)
Gene name: BACOVA_00087
Sequence domains: Putative carbohydrate metabolism domain
Structure domains:

Ligands and Environments

4 bound ligands:
Ligand UNX 1 x UNX
Ligand CL 1 x CL
Ligand SO4 1 x SO4
Ligand GOL 4 x GOL
1 modified residue:
Ligand MSE 5 x MSE

Experiments and Validation Details

Entry percentile scores
X-ray source: SSRL BEAMLINE BL11-1
Spacegroup: R32
Unit cell:
a: 133.88Å b: 133.88Å c: 127.498Å
α: 90° β: 90° γ: 120°
R-values:
R R work R free
0.173 0.171 0.22
Expression system: Escherichia coli

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