› 4h5b

X-ray diffraction
2Å resolution

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domain:

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-193289 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
YbjN domain-containing protein Chains: A, B
Molecule details ›
Chains: A, B
Length: 153 amino acids
Theoretical weight: 17.52 KDa
Source organism: Deinococcus radiodurans R1
Expression system: Escherichia coli BL21
UniProt:
  • Canonical: Q9RUY5 (Residues: 13-165; Coverage: 93%)
Gene name: DR_1245
Sequence domains: Putative bacterial sensory transduction regulator
Structure domains: Yope Regulator; Chain: A,

Ligands and Environments

4 bound ligands:
Ligand BR 1 x BR
Ligand GOL 5 x GOL
Ligand K 1 x K
Ligand SO4 2 x SO4
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: APS BEAMLINE 21-ID-D
Spacegroup: P65
Unit cell:
a: 91.714Å b: 91.714Å c: 87.746Å
α: 90° β: 90° γ: 120°
R-values:
R R work R free
0.168 0.164 0.195
Expression system: Escherichia coli BL21

Quick links

Citations

1 review citation

Recent progress in understanding the molecular mechanisms of radioresistance in Deinococcus bacteria.
Munteanu et al. (2015)
11 other articles

2 mentions without citation

The Deinococcus radiodurans DR1245 protein, a DdrB partner homologous to YbjN proteins and reminiscent of type III secretion system chaperones.
Norais et al. (2013)
1 more