› 4dt0

X-ray diffraction
3.65Å resolution

The structure of the peripheral stalk subunit E from Pyrococcus horikoshii

Released:
DOI: 10.2210/pdb4dt0/pdb
PDB entry 4dt0 coloured by chain, front view.
PDB entry 4dt0 coloured by chain, side view.
PDB entry 4dt0 coloured by chain, top view.
Source organism: Pyrococcus horikoshii OT3
Primary publication:
The structure of subunit E of the Pyrococcus horikoshii OT3 A-ATP synthase gives insight into the elasticity of the peripheral stalk.
Balakrishna AM, Hunke C, Grüber G
J Mol Biol 420 155-63 (2012)
PMID: 22516614

Function and Biology Details

Biochemical function:
Biological process:
Cellular component:
Sequence domains:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-129599 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
V-type ATP synthase subunit E Chain: A
Molecule details ›
Chain: A
Length: 208 amino acids
Theoretical weight: 24.18 KDa
Source organism: Pyrococcus horikoshii OT3
Expression system: Escherichia coli
UniProt:
  • Canonical: O57724 (Residues: 2-198; Coverage: 100%)
Gene names: PH1978, atpE
Sequence domains: ATP synthase (E/31 kDa) subunit
Structure domains:

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: NSRRC BEAMLINE BL13B1
Spacegroup: I4122
Unit cell:
a: 111.828Å b: 111.828Å c: 95.466Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.326 0.323 0.357
Expression system: Escherichia coli

Quick links

Citations

5 review citations

Eukaryotic V-ATPase: novel structural findings and functional insights.
Marshansky et al. (2014)
4 more

3 mentions without citation

Hypothetical protein CT398 (CdsZ) interacts with σ(54) (RpoN)-holoenzyme and the type III secretion export apparatus in Chlamydia trachomatis.
Barta et al. (2015)
2 more