› 4cil

X-ray diffraction
1.5Å resolution

YopM-InlB: Hybrid leucine-rich repeat protein

Released:
DOI: 10.2210/pdb4cil/pdb
PDB entry 4cil coloured by chain, front view.
PDB entry 4cil coloured by chain, side view.
PDB entry 4cil coloured by chain, top view.
Source organisms:
Primary publication:
Crystal structure of an engineered YopM-InlB hybrid protein.
Breitsprecher D, Gherardi E, Bleymüller WM, Niemann HH
BMC Struct Biol 14 12 (2014)
PMID: 24669959

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-144107 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Internalin B; LRR-containing bacterial E3 ligase N-terminal domain-containing protein Chain: A
Molecule details ›
Chain: A
Length: 287 amino acids
Theoretical weight: 32.17 KDa
Source organisms: Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: P74988 (Residues: 34-87; Coverage: 15%)
  • Canonical: P0DQD2 (Residues: 93-321; Coverage: 38%)
Gene names: inlB, lmo0434, yopM
Sequence domains:
Structure domains:

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: EMBL/DESY, HAMBURG BEAMLINE X13
Spacegroup: C2
Unit cell:
a: 59.21Å b: 30.68Å c: 135.39Å
α: 90° β: 90.98° γ: 90°
R-values:
R R work R free
0.177 0.175 0.219
Expression system: Escherichia coli BL21(DE3)

Quick links

Citations

1 citations in other articles

Unraveling Gardnerella vaginalis Surface Proteins Using Cell Shaving Proteomics.
Marín et al. (2018)

1 mention without citation

Crystal structure of an engineered YopM-InlB hybrid protein.
Breitsprecher et al. (2014)