3rfy Summary


Crystal structure of arabidopsis thaliana cyclophilin 38 (ATCYP38)

The structure was published by Vasudevan, D., Fu, A., Luan, S., and Swaminathan, K., in 2012 in a paper entitled "Crystal structure of Arabidopsis cyclophilin38 reveals a previously uncharacterized immunophilin fold and a possible autoinhibitory mechanism." (abstract).

This crystal structure was determined using X-ray diffraction at a resolution of 2.39 Å and deposited in 2011.

The experimental data on which the structure is based was also deposited.

The PDB entry contains the structure of Peptidyl-prolyl cis-trans isomerase CYP38, chloroplastic. This molecule has the UniProt identifier Q9SSA5 (CYP38_ARATH)search. The sample contained 369 residues which is < 90% of the natural sequence. Out of 369 residues 356 were observed and are deposited in the PDB.

The molecule has more than one probable quaternary state observed. For more details see the quaternary structure page.

The following tables show cross-reference information to other databases (to obtain a list of all PDB entries sharing the same property or classification, click on the magnifying glass icon):

Chain Name UniProt Name of source organism % of UniProt sequence present in the sample Residues in the sample molecules % of residues observed
A Peptidyl-prolyl cis-trans isomerase CYP38, chloroplastic Q9SSA5 (83-437) (CYP38_ARATH)search Arabidopsis thalianasearch < 90% 369 96%

This entry contains 1 unique UniProt protein:

UniProt accession Name Organism PDB
Q9SSA5 (83 - 437) Peptidyl-prolyl cis-trans isomerase CYP38, chloroplastic Arabidopsis thaliana

Chain Sequence family (Pfam)
A Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLDsearch

Chain ID Biological process (GO) Molecular function (GO)
A (Q9SSA5) protein peptidyl-prolyl isomerizationsearch protein foldingsearch peptidyl-prolyl cis-trans isomerase activitysearch

Chain InterPro annotation
A Cyclophilin-type peptidyl-prolyl cis-trans isomerase domainsearch PsbQ-like domainsearch Cyclophilin-like domainsearch