3od6 Summary

pdbe.org/3od6
spacer

Crystal structure of p38alpha Y323T active mutant

The structure was published by Tzarum, N., Diskin, R., Engelberg, D., and Livnah, O., in 2011 in a paper entitled "Active mutants of the TCR-mediated p38alpha alternative activation site show changes in the phosphorylation lip and DEF site formation." (abstract).

This crystal structure was determined using X-ray diffraction at a resolution of 2.682 Å and deposited in 2010.

The experimental data on which the structure is based was also deposited.

The PDB entry contains the structure of Mitogen-activated protein kinase 14. This molecule has the UniProt identifier Q16539 (MK14_HUMAN)search. The sample contained 360 residues which is 100% of the natural sequence. Out of 360 residues 344 were observed and are deposited in the PDB.

It also contains one or more heterogenic compounds (e.g., ligands, co-factors, ions, modified amino acids, etc.); see here for a complete list.

The molecule is most likely monomeric.

The following tables show cross-reference information to other databases (to obtain a list of all PDB entries sharing the same property or classification, click on the magnifying glass icon):


Chain Name UniProt Name of source organism % of UniProt sequence present in the sample Residues in the sample molecules % of residues observed
X Mitogen-activated protein kinase 14 Q16539 (1-360) (MK14_HUMAN)search Homo sapienssearch 97% 360 95%


This entry contains 1 unique UniProt protein:

UniProt accession Name Organism PDB
Q16539 (1 - 360) Mitogen-activated protein kinase 14 Homo sapiens

Chain Structural classification (CATH) Sequence family (Pfam)
X (Q16539) Phosphorylase Kinase; domain 1search, Transferase(Phosphotransferase) domain 1search PF00069: Protein kinase domainsearch

Chain ID Molecular function (GO) Cellular component (GO) Biological process (GO)
X (Q16539) protein bindingsearch nucleotide bindingsearch protein serine/threonine kinase activitysearch MAP kinase activitysearch kinase activitysearch NFAT protein bindingsearch ATP bindingsearch protein kinase activitysearch transferase activity, transferring phosphorus-containing groupssearch MAP kinase kinase activitysearch transferase activitysearch cytosolsearch nucleoplasmsearch spindle polesearch nucleussearch extracellular vesicular exosomesearch cytoplasmsearch mitochondrionsearch cellsearch cellular response to DNA damage stimulussearch toll-like receptor signaling pathwaysearch regulation of sequence-specific DNA binding transcription factor activitysearch peptidyl-serine phosphorylationsearch apoptotic processsearch positive regulation of erythrocyte differentiationsearch negative regulation of canonical Wnt signaling pathwaysearch organelle organizationsearch p38MAPK cascadesearch Ras protein signal transductionsearch innate immune responsesearch toll-like receptor 5 signaling pathwaysearch platelet activationsearch cartilage condensationsearch signal transduction in response to DNA damagesearch cellular response to vascular endothelial growth factor stimulussearch protein phosphorylationsearch chondrocyte differentiationsearch MyD88-independent toll-like receptor signaling pathwaysearch transcription, DNA-templatedsearch signal transductionsearch osteoclast differentiationsearch fatty acid oxidationsearch toll-like receptor 10 signaling pathwaysearch TRIF-dependent toll-like receptor signaling pathwaysearch cell surface receptor signaling pathwaysearch activation of MAPK activitysearch toll-like receptor 2 signaling pathwaysearch MyD88-dependent toll-like receptor signaling pathwaysearch cellular response to ionizing radiationsearch muscle cell differentiationsearch regulation of transcription from RNA polymerase II promotersearch positive regulation of myoblast fusionsearch stress-activated MAPK cascadesearch glucose metabolic processsearch vascular endothelial growth factor receptor signaling pathwaysearch chemotaxissearch toll-like receptor TLR1:TLR2 signaling pathwaysearch toll-like receptor 4 signaling pathwaysearch toll-like receptor 3 signaling pathwaysearch gene expressionsearch positive regulation of myoblast differentiationsearch positive regulation of protein import into nucleussearch response to lipopolysaccharidesearch response to muramyl dipeptidesearch 3'-UTR-mediated mRNA stabilizationsearch neurotrophin TRK receptor signaling pathwaysearch positive regulation of transcription from RNA polymerase II promotersearch positive regulation of myotube differentiationsearch intracellular signal transductionsearch positive regulation of brown fat cell differentiationsearch toll-like receptor TLR6:TLR2 signaling pathwaysearch positive regulation of muscle cell differentiationsearch stress-induced premature senescencesearch positive regulation of blood vessel endothelial cell migrationsearch toll-like receptor 9 signaling pathwaysearch DNA damage checkpointsearch skeletal muscle tissue developmentsearch cell morphogenesissearch positive regulation of reactive oxygen species metabolic processsearch cellular response to lipopolysaccharidesearch mitochondrion organizationsearch regulation of transcription, DNA-templatedsearch movement of cell or subcellular componentsearch striated muscle cell differentiationsearch angiogenesissearch lipopolysaccharide-mediated signaling pathwaysearch phosphorylationsearch blood coagulationsearch transmembrane receptor protein serine/threonine kinase signaling pathwaysearch myoblast differentiation involved in skeletal muscle regenerationsearch

Chain InterPro annotation
X Protein kinase domainsearch Serine/threonine/dual specificity protein kinase, catalytic domainsearch Mitogen-activated protein (MAP) kinase, conserved sitesearch Mitogen-activated protein (MAP) kinase, p38search Protein kinase-like domainsearch Protein kinase, ATP binding sitesearch