› 3jq1

X-ray diffraction
1.55Å resolution

Crystal structure of SusD superfamily protein (YP_001297730.1) from Bacteroides vulgatus ATCC 8482 at 1.55 A resolution

Released:
DOI: 10.2210/pdb3jq1/pdb
PDB entry 3jq1 coloured by chain, front view.
PDB entry 3jq1 coloured by chain, side view.
PDB entry 3jq1 coloured by chain, top view.
Source organism: Phocaeicola vulgatus ATCC 8482
Entry author: Joint Center for Structural Genomics (JCSG)

Function and Biology Details

Biochemical function:
Biological process:
  • not assigned
Cellular component:
Sequence domains:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-107851 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Putative outer membrane protein, probably involved in nutrient binding Chains: A, B
Molecule details ›
Chains: A, B
Length: 481 amino acids
Theoretical weight: 56.13 KDa
Source organism: Phocaeicola vulgatus ATCC 8482
Expression system: Escherichia coli
UniProt:
  • Canonical: A6KXE4 (Residues: 34-513; Coverage: 94%)
Gene name: BVU_0390
Sequence domains:
Structure domains: Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat

Ligands and Environments

3 bound ligands:
Ligand CA 11 x CA
Ligand CL 11 x CL
Ligand EDO 4 x EDO
1 modified residue:
Ligand MSE 12 x MSE

Experiments and Validation Details

Entry percentile scores
X-ray source: SSRL BEAMLINE BL12-2
Spacegroup: P212121
Unit cell:
a: 65.65Å b: 94.69Å c: 165.042Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.174 0.172 0.209
Expression system: Escherichia coli

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