3izs Summary

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PDB entry 3izs (supersedes 3izc)

Localization of the large subunit ribosomal proteins into a 6.1 A cryo-EM map of Saccharomyces cerevisiae translating 80S ribosome

The structure was published by Armache, J.P., Jarasch, A., Anger, A.M., et al., Westhof, E., Wilson, D.N., and Beckmann, R., in 2010 in a paper entitled "Cryo-EM structure and rRNA model of a translating eukaryotic 80S ribosome at 5.5-A resolution." (abstract).

The structure was determined using Electron microscopy at a resolution of 8.8 Å and deposited in 2010.

The experimental data on which the structure is based was deposited separately in EMDB as entry 1667.

This entry contains 51 copies of 48 unique biopolymers (complete list).

The most likely quaternary structure is a 51meric assembly.


The are more than 5 unique protein polymers in this entry. More information is available on the Uniprot cross references page.

This entry contains 45 unique UniProt proteins:

UniProt accession Name Organism PDB
P0CX43 (1 - 217) 60S ribosomal protein rpL1 (L1p) Saccharomyces cerevisiae
P14120 (1 - 105) 60S ribosomal protein rpL30 (L30e) Saccharomyces cerevisiae
P0CX45 (1 - 254) 60S ribosomal protein rpL2 (L2p) Saccharomyces cerevisiae
P05737 (1 - 244) 60S ribosomal protein rpL7 (L30p) Saccharomyces cerevisiae
P14126 (1 - 387) 60S ribosomal protein rpL3 (L3p) Saccharomyces cerevisiae
P0C2H8 (1 - 113) 60S ribosomal protein rpL31 (L31e) Saccharomyces cerevisiae
P10664 (1 - 362) 60S ribosomal protein rpL4 (L4p) Saccharomyces cerevisiae
P38061 (1 - 130) 60S ribosomal protein pL32 (L32e) Saccharomyces cerevisiae
P0C0W9 (1 - 174) 60S ribosomal protein rpL11 (L5p) Saccharomyces cerevisiae
P87262 (1 - 118) 60S ribosomal protein rpL34 (L34e) Saccharomyces cerevisiae
Q02326 (1 - 176) 60S ribosomal protein rpL6 (L6e) Saccharomyces cerevisiae
P05744 (1 - 107) 60S ribosomal protein rpL33 (L35ae) Saccharomyces cerevisiae
P05738 (1 - 191) 60S ribosomal protein rpL9 (L6p) Saccharomyces cerevisiae
P05745 (1 - 100) 60S ribosomal protein rpL36 (L36e) Saccharomyces cerevisiae
P17076 (1 - 256) 60S ribosomal protein rpL8 (L7ae) Saccharomyces cerevisiae
P0CX25 (1 - 92) 60S ribosomal protein rpL43 (L37ae) Saccharomyces cerevisiae
P05317 (1 - 312) 60S acidic ribosomal protein rpP0 (L10P) Saccharomyces cerevisiae
P49166 (1 - 88) 60S ribosomal protein rpL37 (L37e) Saccharomyces cerevisiae
P0CX53 (1 - 165) 60S ribosomal protein rpL12 (L11p) Saccharomyces cerevisiae
P49167 (1 - 78) 60S ribosomal protein rpL38 (L38e) Saccharomyces cerevisiae
P26784 (1 - 199) 60S ribosomal protein rpL16 (L13p) Saccharomyces cerevisiae
P04650 (1 - 51) 60S ribosomal protein rpL39 (L39e) Saccharomyces cerevisiae
P36105 (1 - 138) 60S ribosomal protein rpL14 (L14e) Saccharomyces cerevisiae
P0CH08 (77 - 128) 60S ribosomal protein rpL40 (L40e) Saccharomyces cerevisiae
P0CX41 (1 - 137) 60S ribosomal protein rpL23 (L14p) Saccharomyces cerevisiae
P0CX86 (1 - 25) 60S ribosomal protein rpL41 (L41e) Saccharomyces cerevisiae
P05748 (1 - 204) 60S ribosomal protein rpL15 (L15e) Saccharomyces cerevisiae
P0CX27 (1 - 106) 60S ribosomal protein rpL42 (L44e) Saccharomyces cerevisiae
P02406 (1 - 149) 60S ribosomal protein rpL28 (L15p) Saccharomyces cerevisiae
P0CX49 (1 - 186) 60S ribosomal protein rpL18 (L18e) Saccharomyces cerevisiae
P0CX82 (1 - 189) 60S ribosomal protein rpL19 (L19e) Saccharomyces cerevisiae
Q02753 (1 - 160) 60S ribosomal protein rpL21 (L21e) Saccharomyces cerevisiae
P05318 (1 - 106) 60S acidic ribosomal protein rpP11 (P1) Saccharomyces cerevisiae
P05749 (1 - 121) 60S ribosomal protein rpL22 (L22e) Saccharomyces cerevisiae
P05740 (1 - 170) 60S ribosomal protein rpL17 (L22p) Saccharomyces cerevisiae
P05319 (1 - 106) 60S acidic ribosomal protein (P2) Saccharomyces cerevisiae
P04456 (1 - 142) 60S ribosomal protein rpL25 (L23p) Saccharomyces cerevisiae
P04449 (1 - 155) 60S ribosomal protein rpL24 (L24e) Saccharomyces cerevisiae
P26321 (1 - 297) 60S ribosomal protein rpL5 (L18p) Saccharomyces cerevisiae
P05743 (1 - 123) 60S ribosomal protein rpL26 (L24p) Saccharomyces cerevisiae
P0C2H6 (1 - 136) 60S ribosomal protein rpL27 (L27e) Saccharomyces cerevisiae
Q0JJA0 (1 - 167) 60S ribosomal protein rpL20 (L18ae) Saccharomyces cerevisiae
P05747 (1 - 59) 60S ribosomal protein rpL29 (L29e) Saccharomyces cerevisiae
P41805 (1 - 221) 60S ribosomal protein rpL10 (L10e) Saccharomyces cerevisiae
P0CX84 (1 - 120) 60S ribosomal protein rpL35 (L29p) Saccharomyces cerevisiae

For more information on cross references to other databases click Cross references in the menu on the left.