› 3es4

X-ray diffraction
1.64Å resolution

Crystal structure of Protein of unknown function (DUF861) with a RmlC-like cupin fold (17741406) from AGROBACTERIUM TUMEFACIENS str. C58 (Dupont) at 1.64 A resolution

Released:
DOI: 10.2210/pdb3es4/pdb
PDB entry 3es4 coloured by chain, front view.
PDB entry 3es4 coloured by chain, side view.
PDB entry 3es4 coloured by chain, top view.
Source organism: Agrobacterium fabrum str. C58
Entry author: Joint Center for Structural Genomics (JCSG)

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-108843 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
(S)-ureidoglycine aminohydrolase cupin domain-containing protein Chains: A, B
Molecule details ›
Chains: A, B
Length: 116 amino acids
Theoretical weight: 12.77 KDa
Source organism: Agrobacterium fabrum str. C58
Expression system: Escherichia coli
UniProt:
  • Canonical: A9CEL1 (Residues: 1-115; Coverage: 100%)
Gene name: Atu3045
Sequence domains: EutQ-like cupin domain
Structure domains: Jelly Rolls

Ligands and Environments

2 bound ligands:
Ligand CL 1 x CL
Ligand EDO 11 x EDO
1 modified residue:
Ligand MSE 8 x MSE

Experiments and Validation Details

Entry percentile scores
X-ray source: SSRL BEAMLINE BL9-2
Spacegroup: R3
Unit cell:
a: 95.254Å b: 95.254Å c: 83.155Å
α: 90° β: 90° γ: 120°
R-values:
R R work R free
0.143 0.142 0.16
Expression system: Escherichia coli

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