Function and Biology

Crystal Structure of PPAR-delta complex

Source organism: Homo sapiens
Biochemical function: nuclear receptor activity
Biological process: regulation of DNA-templated transcription
Cellular component: nucleus

GO terms

Biochemical function:
Biological process:
Cellular component:

Sequence family

Pfam Protein family (Pfam)
PF00104
Domain description: Ligand-binding domain of nuclear hormone receptor
Occurring in:
  1. Peroxisome proliferator-activated receptor delta
The deposited structure of PDB entry 3d5f contains 2 copies of Pfam domain PF00104 (Ligand-binding domain of nuclear hormone receptor) in Peroxisome proliferator-activated receptor delta. Showing 1 copy in chain A.

InterPro InterPro annotations
IPR003074
Domain description: Peroxisome proliferator-activated receptor
Occurring in:
  1. Peroxisome proliferator-activated receptor delta
IPR001723
Domain description: Nuclear hormone receptor
Occurring in:
  1. Peroxisome proliferator-activated receptor delta
IPR003075
Domain description: Peroxisome proliferator-activated receptor, beta
Occurring in:
  1. Peroxisome proliferator-activated receptor delta
IPR000536
Domain description: Nuclear hormone receptor, ligand-binding domain
Occurring in:
  1. Peroxisome proliferator-activated receptor delta
IPR035500
Domain description: Nuclear hormone receptor-like domain superfamily
Occurring in:
  1. Peroxisome proliferator-activated receptor delta

Structure domain

CATH CATH domain
1.10.565.10
Class: Mainly Alpha
Architecture: Orthogonal Bundle
Topology: Retinoid X Receptor
Homology: Retinoid X Receptor
Occurring in:
  1. Peroxisome proliferator-activated receptor delta
The deposited structure of PDB entry 3d5f contains 2 copies of CATH domain 1.10.565.10 (Retinoid X Receptor) in Peroxisome proliferator-activated receptor delta. Showing 1 copy in chain A.
SCOP SCOP annotation
48509
Class: All alpha proteins
Fold: Nuclear receptor ligand-binding domain
Superfamily: Nuclear receptor ligand-binding domain
Occurring in:
  1. Peroxisome proliferator-activated receptor delta
The deposited structure of PDB entry 3d5f contains 2 copies of SCOP domain 48509 (Nuclear receptor ligand-binding domain) in Peroxisome proliferator-activated receptor delta. Showing 1 copy in chain A.