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Crystal structure of a putative aminoglycoside phosphotransferase (YP_614837.1) from Silicibacter sp. TM1040 at 2.15 A resolution

The structure was published by Joint Center for Structural Genomics (JCSG), in in a paper entitled "Crystal structure of a putative aminoglycoside phosphotransferase (YP_614837.1) from Silicibacter sp. TM1040 at 2.15 A resolution" (abstract).

This crystal structure was determined using X-ray diffraction at a resolution of 2.15 Å and deposited in 2008.

The experimental data on which the structure is based was also deposited.

The PDB entry contains the structure of Aminoglycoside phosphotransferase. This molecule has the UniProt identifier Q1GCP1 (Q1GCP1_RUEST)search. The sample contained 333 residues which is 100% of the natural sequence. Out of 333 residues 315 were observed and are deposited in the PDB.

It also contains one or more heterogenic compounds (e.g., ligands, co-factors, ions, modified amino acids, etc.); see here for a complete list.

The molecule most likely forms homodimers.

The following tables show cross-reference information to other databases (to obtain a list of all PDB entries sharing the same property or classification, click on the magnifying glass icon):


Chain Name UniProt Name of source organism % of UniProt sequence present in the sample Residues in the sample molecules % of residues observed
A Aminoglycoside phosphotransferase Q1GCP1 (1-332) (Q1GCP1_RUEST)search Ruegeria sp. TM1040search 100% 333 96%


This entry contains 1 unique UniProt protein:

UniProt accession Name Organism PDB
Q1GCP1 (1 - 332) Aminoglycoside phosphotransferase Ruegeria sp. TM1040

Chain Structural classification (CATH) Sequence family (Pfam)
A (Q1GCP1) Phosphorylase Kinase; domain 1search, Aminoglycoside 3'-phosphotransferase; Chain: A, domain 2search PF01636: Phosphotransferase enzyme familysearch

Chain ID Molecular function (GO) Biological process (GO)
A (Q1GCP1) transferase activity, transferring phosphorus-containing groupssearch metal ion bindingsearch transferase activitysearch metabolic processsearch

Chain InterPro annotation
A Aminoglycoside phosphotransferasesearch Protein kinase-like domainsearch