3a4p Summary

pdbe.org/3a4p
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human c-MET kinase domain complexed with 6-benzyloxyquinoline inhibitor

The structure was published by Nishii, H., Chiba, T., Morikami, K., et al., Sakamoto, H., Ko, K., and Koyano, H., in 2010 in a paper entitled "Discovery of 6-benzyloxyquinolines as c-Met selective kinase inhibitors" (abstract).

This crystal structure was determined using X-ray diffraction at a resolution of 2.54 Å and deposited in 2009.

The experimental data on which the structure is based was also deposited.

The PDB entry contains the structure of Hepatocyte growth factor receptor. This molecule has the UniProt identifier P08581 (MET_HUMAN)search. The sample contained 319 residues which is < 90% of the natural sequence. Out of 319 residues 282 were observed and are deposited in the PDB.

It also contains one or more heterogenic compounds (e.g., ligands, co-factors, ions, modified amino acids, etc.); see here for a complete list.

The molecule is most likely monomeric.

The following tables show cross-reference information to other databases (to obtain a list of all PDB entries sharing the same property or classification, click on the magnifying glass icon):


Chain Name UniProt Name of source organism % of UniProt sequence present in the sample Residues in the sample molecules % of residues observed
A Hepatocyte growth factor receptor P08581 (1049-1360) (MET_HUMAN)search Homo sapienssearch < 90% 319 89%


This entry contains 1 unique UniProt protein:

UniProt accession Name Organism PDB
P08581 (1049 - 1360) Hepatocyte growth factor receptor Homo sapiens

Chain Structural classification (CATH) Sequence family (Pfam)
A Phosphorylase Kinase; domain 1search, Transferase(Phosphotransferase) domain 1search Protein tyrosine kinasesearch

Chain ID Molecular function (GO) Biological process (GO)
A (P08581) ATP bindingsearch protein kinase activitysearch transferase activity, transferring phosphorus-containing groupssearch protein tyrosine kinase activitysearch protein phosphorylationsearch

Chain InterPro annotation
A Protein kinase domainsearch Serine-threonine/tyrosine-protein kinase catalytic domainsearch Tyrosine-protein kinase, active sitesearch Protein kinase-like domainsearch Protein kinase, ATP binding sitesearch Tyrosine-protein kinase, catalytic domainsearch