› 3mez

X-ray diffraction
1.94Å resolution

X-ray structural analysis of a mannose specific lectin from dutch crocus (crocus vernus)

Released:
DOI: 10.2210/pdb3mez/pdb
PDB entry 3mez coloured by chain, front view.
PDB entry 3mez coloured by chain, side view.
PDB entry 3mez coloured by chain, top view.
Source organism: Crocus vernus
Entry authors: Akrem A, Meyer A, Perbandt M, Voelter W, Buck F, Betzel C

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
hetero tetramer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-160982 (preferred)
Entry contents:
2 distinct polypeptide molecules
Macromolecules (2 distinct):
Mannose-specific lectin 3 chain 1 Chains: A, C
Molecule details ›
Chains: A, C
Length: 111 amino acids
Theoretical weight: 12.01 KDa
Source organism: Crocus vernus
UniProt:
  • Canonical: P86626 (Residues: 1-111; Coverage: 50%)
Structure domains: Bulb-type lectin domain
Mannose-specific lectin 3 chain 2 Chains: B, D
Molecule details ›
Chains: B, D
Length: 113 amino acids
Theoretical weight: 12.48 KDa
Source organism: Crocus vernus
UniProt:
  • Canonical: P86626 (Residues: 112-224; Coverage: 50%)
Structure domains: Bulb-type lectin domain

Ligands and Environments

2 bound ligands:
Ligand GOL 3 x GOL
Ligand FMT 8 x FMT
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: EMBL/DESY, HAMBURG BEAMLINE X13
Spacegroup: P21212
Unit cell:
a: 48.422Å b: 98.154Å c: 105.827Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.18 0.178 0.225

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