2ya1

X-ray diffraction
2.25Å resolution

Product complex of a multi-modular glycogen-degrading pneumococcal virulence factor SpuA

Released:

Function and Biology Details

Reaction catalysed:
Hydrolysis of (1->6)-alpha-D-glucosidic linkages in pullulan, amylopectin and glycogen, and in the alpha- and beta-limit dextrins of amylopectin and glycogen.
Biochemical function:
Biological process:
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-101403 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecules (4 distinct):
Pullulanase A Chain: A
Molecule details ›
Chain: A
Length: 1014 amino acids
Theoretical weight: 114.84 KDa
Source organism: Streptococcus pneumoniae TIGR4
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: A0A0H2UNG0 (Residues: 135-1143; Coverage: 82%)
Gene names: SP_0268, spuA
Sequence domains:
Structure domains:

Ligands and Environments

Carbohydrate polymer : NEW Components: BGC, GLC
Carbohydrate polymer : NEW Components: GLC
Carbohydrate polymer : NEW Components: GLC
2 bound ligands:
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: RIGAKU MICROMAX-002
Spacegroup: P212121
Unit cell:
a: 80.137Å b: 86.429Å c: 193.225Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.208 0.205 0.265
Expression system: Escherichia coli BL21(DE3)