2y5i Summary

pdbe.org/2y5i
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S100Z FROM ZEBRAFISH IN COMPLEX WITH CALCIUM

The structure was published by Moroz, O.V., Bronstein, I.B., and Wilson, K.S., in 2011 in a paper entitled "The Crystal Structure of Zebrafish S100Z: Implications for Calcium-Promoted S100 Protein Oligomerisation." (abstract).

This crystal structure was determined using X-ray diffraction at a resolution of 2.03 Å and deposited in 2011.

The experimental data on which the structure is based was also deposited.

This PDB entry contains multiple copies of the structure of S100 CALCIUM BINDING PROTEIN Z.

It also contains one or more heterogenic compounds (e.g., ligands, co-factors, ions, modified amino acids, etc.); see here for a complete list.

The molecule has more than one probable quaternary state observed. For more details see the quaternary structure page.

The following tables show cross-reference information to other databases (to obtain a list of all PDB entries sharing the same property or classification, click on the magnifying glass icon):


Chain Name UniProt Name of source organism % of UniProt sequence present in the sample Residues in the sample molecules % of residues observed
A S100 CALCIUM BINDING PROTEIN Z Q503K9 (1-99) (Q503K9_DANRE)search Danio reriosearch 100% 99 98%
B S100 CALCIUM BINDING PROTEIN Z Q503K9 (1-99) (Q503K9_DANRE)search Danio reriosearch 100% 99 98%
C S100 CALCIUM BINDING PROTEIN Z Q503K9 (1-99) (Q503K9_DANRE)search Danio reriosearch 100% 99 98%
D S100 CALCIUM BINDING PROTEIN Z Q503K9 (1-99) (Q503K9_DANRE)search Danio reriosearch 100% 99 98%
E S100 CALCIUM BINDING PROTEIN Z Q503K9 (1-99) (Q503K9_DANRE)search Danio reriosearch 100% 99 98%
F S100 CALCIUM BINDING PROTEIN Z Q503K9 (1-99) (Q503K9_DANRE)search Danio reriosearch 100% 99 98%


This entry contains 1 unique UniProt protein:

UniProt accession Name Organism PDB
Q503K9 (1 - 99) S100 CALCIUM BINDING PROTEIN Z Danio rerio

Chain Structural classification (CATH) Sequence family (Pfam)
A, B, C, D, E, F (Q503K9) EF-handsearch PF01023: S-100/ICaBP type calcium binding domainsearch

Chain ID Molecular function (GO) Cellular component (GO)
A, B, C, D, E, F (Q503K9) calcium ion bindingsearch metal ion bindingsearch cellular_componentsearch

Chain InterPro annotation
A, B, C, D, E, F S100/Calbindin-D9k, conserved sitesearch EF-hand domainsearch EF-hand domain pairsearch S100/CaBP-9k-type, calcium binding, subdomainsearch EF-Hand 1, calcium-binding sitesearch Protein S100-Zsearch