› 2wot

X-ray diffraction
1.85Å resolution

ALK5 IN COMPLEX WITH 4-((5,6-dimethyl-2-(2-pyridyl)-3-pyridyl)oxy)-N-(3,4,5-trimethoxyphenyl)pyridin-2-amine

Released:
DOI: 10.2210/pdb2wot/pdb
PDB entry 2wot coloured by chain, front view.
PDB entry 2wot coloured by chain, side view.
PDB entry 2wot coloured by chain, top view.
Source organism: Homo sapiens
Primary publication:
Rapid generation of a high quality lead for transforming growth factor-beta (TGF-beta) type I receptor (ALK5).
Goldberg FW, Ward RA, Powell SJ, Debreczeni JE, Norman RA, Roberts NJ, Dishington AP, Gingell HJ, Wickson KF, Roberts AL
J Med Chem 52 7901-5 (2009)
PMID: 19736928

Function and Biology Details

Reaction catalysed: 
ATP + [receptor-protein] = ADP + [receptor-protein] phosphate
Biochemical function:
Biological process:
Cellular component:
Sequence domains:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-153250 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
TGF-beta receptor type-1 Chain: A
Molecule details ›
Chain: A
Length: 306 amino acids
Theoretical weight: 34.94 KDa
Source organism: Homo sapiens
Expression system: Spodoptera frugiperda
UniProt:
  • Canonical: P36897 (Residues: 200-503; Coverage: 65%)
Gene names: ALK5, SKR4, TGFBR1
Sequence domains: Protein kinase domain
Structure domains:

Ligands and Environments

2 bound ligands:
Ligand ZZG 1 x ZZG
Ligand EDO 1 x EDO
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: RIGAKU FR-E
Spacegroup: P212121
Unit cell:
a: 41.933Å b: 78.218Å c: 89.074Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.181 0.179 0.221
Expression system: Spodoptera frugiperda

Quick links

Citations

3 review citations

Structural biology of the TGFβ family.
Goebel et al. (2019)
2 more

8 mentions without citation

Structural pathways of cytokines may illuminate their roles in regulation of cancer development and immunotherapy.
Guven-Maiorov et al. (2014)
7 more