2w87

X-ray diffraction
1.6Å resolution

Function and Biology Details

Biochemical function:
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-175976 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Esterase D Chains: A, B
Molecule details ›
Chains: A, B
Length: 139 amino acids
Theoretical weight: 14.15 KDa
Source organism: Cellvibrio japonicus
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: Q51815 (Residues: 160-298; Coverage: 24%)
Gene name: xynD
Sequence domains: Carbohydrate binding module (family 6)
Structure domains: Galactose-binding domain-like

Ligands and Environments

3 bound ligands:
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: DIAMOND BEAMLINE I03
Spacegroup: P1
Unit cell:
a: 27.85Å b: 45.45Å c: 48.91Å
α: 71.79° β: 89.74° γ: 81.28°
R-values:
R R work R free
0.145 0.143 0.193
Expression system: Escherichia coli BL21(DE3)