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hPPARgamma Ligand binding domain in complex with DHA

X-ray diffraction
2.55Å resolution
PDB entry 2vv0 coloured by chain, front view.
PDB entry 2vv0 coloured by chain, side view.
PDB entry 2vv0 coloured by chain, top view.
Source organism: Homo sapiens
Assembly composition:
monomeric (preferred)
Entry contents: 1 distinct polypeptide molecule

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Assemblies

Assembly 1 (preferred)
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Assembly Name: Peroxisome proliferator-activated receptor gamma
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Multimeric state: monomeric
Accessible surface area: 13000.85 Å2
Buried surface area: 924.29 Å2
Dissociation area: 462.15 Å2
Dissociation energy (ΔGdiss): -1.64 kcal/mol
Dissociation entropy (TΔSdiss): 4.68 kcal/mol
Symmetry number: 1
PDBe Complex ID: PDB-CPX-153368
Assembly 2
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Assembly Name: Peroxisome proliferator-activated receptor gamma
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Multimeric state: monomeric
Accessible surface area: 13372.59 Å2
Buried surface area: 840.91 Å2
Dissociation area: 420.46 Å2
Dissociation energy (ΔGdiss): -4.52 kcal/mol
Dissociation entropy (TΔSdiss): 4.41 kcal/mol
Symmetry number: 1
PDBe Complex ID: PDB-CPX-153368

Macromolecules

Peroxisome proliferator-activated receptor gamma
Chains: A, B
Length: 276 amino acids
Theoretical weight: 31.45 KDa
Source organism: Homo sapiens
Expression system: Escherichia coli BL21
UniProt:
  • Canonical: P37231 (Residues: 232-505; Coverage: 54%)
Gene names: NR1C3, PPARG
Pfam: Ligand-binding domain of nuclear hormone receptor
InterPro:
CATH: Retinoid X Receptor
SCOP: Nuclear receptor ligand-binding domain
Peroxisome proliferator-activated receptor gamma in PDB entry 2vv0, assembly 1, front view.
Peroxisome proliferator-activated receptor gamma in PDB entry 2vv0, assembly 1, side view.
Peroxisome proliferator-activated receptor gamma in PDB entry 2vv0, assembly 1, top view.
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