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PDBe Entry: 2vr4 view

TRANSITION-STATE MIMICRY IN MANNOSIDE HYDROLYSIS: CHARACTERISATION OF TWENTY SIX INHIBITORS AND INSIGHT INTO BINDING FROM LINEAR FREE ENERGY RELATIONSHIPS AND 3-D STRUCTURE
Summary
Header HYDROLASEsearch
Method X-RAY DIFFRACTION
Experiment Resolution: 1.8 Å, R-factor: 17.9%, Free R-factor: 22.2%, Spacegroup: P 1 21 1
Released 08/04/2008, deposition: 25/03/2008, last revision: 24/02/2009
Authors Tailford, L.E.search; Offen, W.A.search; Smith, N.L.search; Dumon, C.search; Moreland, C.search; Gratien, J.search; Heck, M.P.search; Stick, R.V.search; Bleriot, Y.search; Vasella, A.search; Gilbert, H.J.search; Davies, G.J.search
Primary citation Structural and Biochemical Evidence for a Boat-Like Transition State in Beta-Mannosidases.
NAT.CHEM.BIOL.search vol:4, pag:306 (2008) [PubMed ID 18408714 ]search
Keywords LINEAR FREE ENERGY RELATIONSHIPsearch, HYDROLASEsearch, TRANSITION STATE MIMICsearch, MANNOSIDASEsearch, GLYCOSIDE HYDROLASEsearch
Organism Bacteroides thetaiotaomicron VPI-5482 226186search(A B)
UniProt Beta-mannosidase Q8AAK6search (A B)
Solvent A, B
Related entries 2vot, 2vqt, 2vl4, 2vqu, 2vo5, 2je8, 2vjx, 2vmf
Polymers
Id Name Type UniProt Residues Observed
A, B BETA-MANNOSIDASE Protein Q8AAK6 (Q8AAK6_BACTN)search
846 99%
Heterogens
Id Name Ligands
A, B (2Z,3R,4S,5R,6R)-2-[(4-AMINOBUTYL)IMINO]-6-(HYDROXYMETHYL)PIPERIDINE-3,4,5-TRIOL 17B search
A, B 1,2-ETHANEDIOL EDO search
A, B BROMIDE ION BR search
A, B CHLORIDE ION CL search
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