2uxl Summary

pdbe.org/2uxl
spacer

X-RAY HIGH RESOLUTION STRUCTURE OF THE PHOTOSYNTHETIC REACTION CENTER FROM RB. SPHAEROIDES AT PH 10 IN THE NEUTRAL STATE, 2ND DATASET

The structure was published by Koepke, J., Krammer, E.M., Klingen, A.R., Sebban, P., Ullmann, G.M., and Fritzsch, G., in 2007 in a paper entitled "Ph Modulates the Quinone Position in the Photosynthetic Reaction Center from Rhodobacter Sphaeroides in the Neutral and Charge Separated States." (abstract).

This crystal structure was determined using X-ray diffraction at a resolution of 2.88 Å and deposited in 2007.

The experimental data on which the structure is based was also deposited.

This PDB entry contains a complex of 3 biomacromolecules, namely REACTION CENTER PROTEIN H CHAIN, REACTION CENTER PROTEIN L CHAIN, and REACTION CENTER PROTEIN M CHAIN.

It also contains one or more heterogenic compounds (e.g., ligands, co-factors, ions, modified amino acids, etc.); see here for a complete list.

The molecule most likely forms heterotrimers.

The following tables show cross-reference information to other databases (to obtain a list of all PDB entries sharing the same property or classification, click on the magnifying glass icon):


Chain Name UniProt Name of source organism % of UniProt sequence present in the sample Residues in the sample molecules % of residues observed
H REACTION CENTER PROTEIN H CHAIN P0C0Y7 (1-260) (RCEH_RHOSH)search Rhodobacter sphaeroidessearch 91% 260 92%
L REACTION CENTER PROTEIN L CHAIN P0C0Y8 (2-282) (RCEL_RHOSH)search Rhodobacter sphaeroidessearch 94% 281 100%
M REACTION CENTER PROTEIN M CHAIN P0C0Y9 (2-308) (RCEM_RHOSH)search Rhodobacter sphaeroidessearch 96% 307 98%


This entry contains 3 unique UniProt proteins:

UniProt accession Name Organism PDB
P0C0Y7 (1 - 260) REACTION CENTER PROTEIN H CHAIN Rhodobacter sphaeroides
P0C0Y8 (2 - 282) REACTION CENTER PROTEIN L CHAIN Rhodobacter sphaeroides
P0C0Y9 (2 - 308) REACTION CENTER PROTEIN M CHAIN Rhodobacter sphaeroides

Chain Structural classification (SCOP) Structural classification (CATH) Sequence family (Pfam)
H (P0C0Y7) Photosynthetic Reaction Center, subunit H, domain 1search, Photosynthetic Reaction Center, subunit H, domain 2search PF03967: Photosynthetic reaction centre, H-chain N-terminal regionsearch, PF05239: PRC-barrel domainsearch
L (P0C0Y8) Bacterial photosystem II reaction centre, L and M subunitssearch Membrane spanning alpha-helix pairssearch PF00124: Photosynthetic reaction centre proteinsearch
M (P0C0Y9) Bacterial photosystem II reaction centre, L and M subunitssearch Membrane spanning alpha-helix pairssearch PF00124: Photosynthetic reaction centre proteinsearch

Chain ID Molecular function (GO) Cellular component (GO) Biological process (GO)
H (P0C0Y7) electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activitysearch chlorophyll bindingsearch bacteriochlorophyll bindingsearch plasma membrane light-harvesting complexsearch membranesearch integral component of membranesearch plasma membrane-derived chromatophore membranesearch protein-chromophore linkagesearch photosynthesis, light reactionsearch oxidation-reduction processsearch photosynthesissearch
L (P0C0Y8) chlorophyll bindingsearch bacteriochlorophyll bindingsearch electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activitysearch metal ion bindingsearch plasma membrane-derived chromatophore membranesearch plasma membrane light-harvesting complexsearch membranesearch integral component of membranesearch photosynthesis, light reactionsearch photosynthetic electron transport in photosystem IIsearch photosynthesissearch oxidation-reduction processsearch protein-chromophore linkagesearch
M (P0C0Y9) bacteriochlorophyll bindingsearch electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activitysearch metal ion bindingsearch chlorophyll bindingsearch integral component of membranesearch plasma membrane light-harvesting complexsearch membranesearch plasma membrane-derived chromatophore membranesearch photosynthesis, light reactionsearch oxidation-reduction processsearch photosynthetic electron transport in photosystem IIsearch protein-chromophore linkagesearch photosynthesissearch

Chain InterPro annotation
H Photosynthetic reaction centre, H subunitsearch PRC-barrel-likesearch Bacterial photosynthetic reaction centre, H-chain, C-terminalsearch Photosynthetic reaction centre, H subunit, N-terminalsearch PRC-barrel domainsearch
L Photosynthetic reaction centre, L/Msearch Photosynthetic reaction centre, L subunitsearch
M Photosynthetic reaction centre, L/Msearch Photosynthetic reaction centre, M subunitsearch