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PDBe Entry: 2o8m view

Crystal structure of the S139A mutant of Hepatitis C Virus NS3/4A protease
Summary
Header Viral Proteinsearch
Method X-RAY DIFFRACTION
Experiment Resolution: 2.0 Å, R-factor: 19.6%, Free R-factor: 22.8%, Spacegroup: H 3 2
Released 09/10/2007, deposition: 12/12/2006, last revision: 24/02/2009
Authors Fischmann, T.O.search; Prongay, A.J.search; Madison, V.M.search; Yao, N.search
Primary citation Discovery of the HCV NS3/4A protease inhibitor (1R,5S)-N-[3-amino-1-(cyclobutylmethyl)-2,3-dioxopropyl]-3- [2(S)-[[[(1,1-dimethylethyl)amino]carbonyl]amino]-3,3-dimethyl-1-oxobutyl]- 6,6-dimethyl-3-azabicyclo[3.1.0]hexan-2(S)-carboxamide (Sch 503034) II. Key steps in structure-based optimization
J.MED.CHEM.search vol:50, pag:2310-2318 (2007) [PubMed ID 17444623 ]search
Keywords SERINE PROTEASEsearch, NS3search, NS4Asearch, HEPATITIS C VIRUSsearch, Viral Proteinsearch
EC 2.7.7.48 ExPASy BRENDA search 3.4.21.98 ExPASy BRENDA search 3.6.1.15 ExPASy BRENDA search (C D)
Organism Hepatitis C virus 11103search(A B)
UniProt Polyprotein,Genome polyprotein Q9ELS8search (A B)
Genome polyprotein [Contains: Core protein p21 (Capsid protein C) (p21); Core protein p19; Envelope glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2 (NS1) (gp68) (gp70); p7; Protease NS2-3 (EC 3.4.22.-) (p23); Serine protease/NTPase/helicase NS3 (EC 3.4.21.98) (EC 3.6.1.15) (EC 3.6.1.-) (Hepacivirin) (NS3P) (p70); Non-structural protein 4A (NS4A) (p8); Non-structural protein 4B (NS4B) (p27); Non-structural protein 5A (NS5A) (p56); RNA-directed RNA polymerase (EC 2.7.7.48) (NS5B) (p68)] P27958search (C D)
Solvent A, B, C, D
Polymers
Id Name Type UniProt Residues Observed
A, B Protease Protein Q9ELS8 (Q9ELS8_9HEPC)search
200 92%
C, D Protease Protein P27958 (POLG_HCVH)search
23 100%
Heterogens
Id Name Ligands
A, B ZINC ION ZN search
C, A SODIUM ION NA search
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