2gcc Summary

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SOLUTION STRUCTURE OF THE GCC-BOX BINDING DOMAIN, NMR, MINIMIZED MEAN STRUCTURE

The structure was published by Allen, M.D., Yamasaki, K., Ohme-Takagi, M., Tateno, M., and Suzuki, M., in 1998 in a paper entitled "A novel mode of DNA recognition by a beta-sheet revealed by the solution structure of the GCC-box binding domain in complex with DNA." (abstract).

The structure was determined using NMR spectroscopy and deposited in 1998.

The experimental data on which the structure is based was not deposited.

The PDB entry contains the structure of ATERF1. This molecule has the UniProt identifier O80337 (EF100_ARATH)search. The sample contained 70 residues which is < 90% of the natural sequence. Out of 70 residues 63 were observed and are deposited in the PDB.

The molecule is most likely monomeric.

The following tables show cross-reference information to other databases (to obtain a list of all PDB entries sharing the same property or classification, click on the magnifying glass icon):


Chain Name UniProt Name of source organism % of UniProt sequence present in the sample Residues in the sample molecules % of residues observed
A ATERF1 O80337 (143-212) (EF100_ARATH)search Arabidopsis thalianasearch < 90% 70 90%


This entry contains 1 unique UniProt protein:

UniProt accession Name Organism PDB
O80337 (143 - 212) ATERF1 Arabidopsis thaliana

Chain Structural classification (SCOP) Structural classification (CATH) Sequence family (Pfam)
A GCC-box binding domainsearch GCC-box Binding Domainsearch AP2 domainsearch

Chain ID Biological process (GO) Molecular function (GO)
A (O80337) regulation of transcription, DNA-templatedsearch DNA bindingsearch sequence-specific DNA binding transcription factor activitysearch

Chain InterPro annotation
A AP2/ERF domainsearch DNA-binding domainsearch