2ftd Summary


Crystal structure of Cathepsin K complexed with 7-Methyl-Substituted Azepan-3-one compound

The structure was published by Yamashita, D.S., Marquis, R.W., Xie, R., et al., Zembryki, D.L., Lark, M.W., and Veber, D.F., in 2006 in a paper entitled "Structure activity relationships of 5-, 6-, and 7-methyl-substituted azepan-3-one cathepsin K inhibitors." (abstract).

This crystal structure was determined using X-ray diffraction at a resolution of 2.55 Å and deposited in 2006.

The experimental data on which the structure is based was also deposited.

This PDB entry contains multiple copies of the structure of Cathepsin K.

It also contains one or more heterogenic compounds (e.g., ligands, co-factors, ions, modified amino acids, etc.); see here for a complete list.

The molecule has more than one probable quaternary state observed. For more details see the quaternary structure page.

The following tables show cross-reference information to other databases (to obtain a list of all PDB entries sharing the same property or classification, click on the magnifying glass icon):

Chain Name UniProt Name of source organism % of UniProt sequence present in the sample Residues in the sample molecules % of residues observed
A Cathepsin K P61277 (115-329) (CATK_MACMU)search Macaca mulattasearch < 90% 215 100%
B Cathepsin K P61277 (115-329) (CATK_MACMU)search Macaca mulattasearch < 90% 215 100%

This entry contains 1 unique UniProt protein:

UniProt accession Name Organism PDB
P61277 (115 - 329) Cathepsin K Macaca mulatta

Chain Structural classification (SCOP) Structural classification (CATH) Sequence family (Pfam)
A, B Papain-likesearch Cysteine proteinasessearch Papain family cysteine proteasesearch

Chain ID Molecular function (GO) Biological process (GO)
A, B (P61277) cysteine-type peptidase activitysearch proteolysissearch

Chain InterPro annotation
A, B Cysteine peptidase, cysteine active sitesearch Peptidase C1A, papain C-terminalsearch Peptidase C1Asearch Peptidase C1A, cathepsin Ksearch Cysteine peptidase, histidine active sitesearch Cysteine peptidase, asparagine active sitesearch