› 2f8l

X-ray diffraction
2.2Å resolution

Crystal structure of a putative class i s-adenosylmethionine-dependent methyltransferase (lmo1582) from listeria monocytogenes at 2.20 A resolution

Released:
DOI: 10.2210/pdb2f8l/pdb
PDB entry 2f8l coloured by chain, front view.
PDB entry 2f8l coloured by chain, side view.
PDB entry 2f8l coloured by chain, top view.
Source organism: Listeria monocytogenes
Entry author: Joint Center for Structural Genomics (JCSG)

Function and Biology Details

Biochemical function:
Biological process:
Cellular component:
  • not assigned
Sequence domains:
Structure domain:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-186974 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
site-specific DNA-methyltransferase (adenine-specific) Chain: A
Molecule details ›
Chain: A
Length: 344 amino acids
Theoretical weight: 38.95 KDa
Source organism: Listeria monocytogenes
Expression system: Escherichia coli
UniProt:
  • Canonical: Q8Y6U9 (Residues: 1-332; Coverage: 100%)
Gene name: lmo1582
Sequence domains:
Structure domains:

Ligands and Environments

4 bound ligands:
Ligand CL 1 x CL
Ligand SO4 1 x SO4
Ligand SAM 1 x SAM
Ligand GOL 5 x GOL
1 modified residue:
Ligand MSE 7 x MSE

Experiments and Validation Details

Entry percentile scores
X-ray source: ALS BEAMLINE 8.2.1
Spacegroup: I41
Unit cell:
a: 99.595Å b: 99.595Å c: 117.084Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.168 0.165 0.211
Expression system: Escherichia coli

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